Xenopus laevis (African clawed frog): 108711179
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Entry
108711179 CDS
T01010
Symbol
lamb1.L
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04510
Focal adhesion
xla04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108711179 (lamb1.L)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108711179 (lamb1.L)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
BNR_6
ATG17_like
Motif
Other DBs
NCBI-GeneID:
108711179
NCBI-ProteinID:
XP_018108130
Xenbase:
XB-GENE-17339231
UniProt:
A0A1L8GZ69
A0A974HSX1
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All DBs
Position
3L:82336882..82370521
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AA seq
1785 aa
AA seq
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MRTMGLFQMPGFLLVLLWGATYAQEPDFSHGCTEGSCYPATGDLLIGRSEQLTASSTCGN
QKPESFCIVSHLQEEKKCFICDSREPYNEQNNTESHCIENVVTTFAPNRLNLWWQSVNGL
ENVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWKVYRYFAYDCEASFPGIF
TGPMKKVDDIICDSRYSDIEPSTEGEVIYRVLDPAYRIEDPYSLRIKSMLRITNLRVKFL
KLHTLGDNLLDSRVEIKEKYYYAIYDMVVRGNCFCYGHASECAPVKGYSDNVEGMVHGRC
VCRHNTKGLNCEQCLDFYHDLPWRPAEGRSSNACKRCNCNEHSTHCHFDMAVYMSTGNTS
GGVCDDCQHNTMGRNCEQCKPFFYQHPDKDIRDPNICQPCNCDPAGSQDGGICDRYSDFS
VGFIAGQCRCKLNVEGERCDQCKEGFYDLNAEDPEGCQYCGCNPLGTIPGGNSCDSRNGN
CFCKRFVTGRKCDQCSPEFWGLSNDLDGCRPCDCDHGGAEDNNCSPESGQCQCRPHMIGR
QCNEVESGFYFISLDHYTYEAEYANFGPEVRIVERSLPHDRTPSWTGIGFARVPEGAYLE
FHINDIPTSMEYDLLIRYEPQLPEQWEEAVITVLRPGKIPTSSRCGNTVPSDDNQSVALP
PGSRYITLPRPICFEKGLNYTIRLELPRYSVNSNVENPYTLIDSIVLLPHVKSLDIFSMG
GSGDDVTTNTAWQTFQRYRCLENSQSVVKTPLTDVCKNFLFSISALLHKGALECHCNPQG
SLSSVCDPNGGQCQCRPNVIGRNCDKCDPGTFGFGPSGCKPCECDVRGSSHAFCHPETGQ
CPCIHGAYGRQCDICLPGYWGFPSCRQCQCNGHAEDCNVLTGECTNCKDHTEGYSCERCL
SGYYGDPRLGSGDHCRPCPCPDGPGSERQFASGCYKNPTTLQVVCTCNMGYTGIRCDGCS
SGYFGNPEEIGGVCQPCHCNNNIDMADPLACDKQSGLCLKCLYHTEGDNCQQCQLGYYGN
ALQQDCRRCVCNYLGTEQEHCTGEIECHCSRTNGQCPCLPNVIGQSCDRCETNTWNLASG
TGCESCACNTNRSLGLSCNEFTGQCQCMPGFGGRDCSECQELFWGNPDIECRACDCDSRG
IQTSQCNRATGHCICKDGVEGVRCDKCARGYSGTFPNCTPCHNCFTLWDVIIQELSNKTS
QLLNRTNALKISGIIGPYQQTVDKVQEKLDEIRSILANNPASHPLKNIENLLEEAEKLKS
EVSQRAAEVEMKLAEIKTNDTEKLDALQADAESFGQALKELGEQLEFMKISNVQGAMDSI
NKYFQMSLEAQEKVNVSVSNPDSVIEHSAATRQEVENLINENYSQFKKEQEEQTRLLDEL
AGNGQSLDLSSLSEKTCGNSPGVLCEDSECGGLNCKTDDGKRKCGGPGCGGLVTVAHSAW
KTATSFDTEIQNALAEVEELSKMVAESKLRAEEAKLNAQDVLNKANATKEKVNRSNEDLR
NLIKQIREFLMQDGADLDSIEAVASEVLKMEMPTTPEQLQKLTEEIRERVESLSGVDKIL
KQSAGDIARAEALLDEAKESSKSAADIKATVDAVKEALEEAGKAQSAAEKAIKRADDDIK
GTNDLLTSIESETAVSEETLNNATKRLVQLEKNIDDLMKKSAANSQTANQVEKSVNEVKA
SADGAKKVLDGELNNKYKTVEDLIAKKAEDSEEARKKAQELQKEAKGLLEQANKKLDTIK
DLEKTYEGNERILEEKAKQLVQLEETVRSILQAISQKAAVYSTCL
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgaggacaatggggctgtttcagatgccaggatttcttctggtattgttgtggggagct
acctatgcccaggagccagatttcagccatggctgcacagaaggaagctgctacccagcc
acaggagatctattgattggtcgatcagagcaactcactgcatcatctacatgtggcaac
caaaaaccagaatcattttgtattgttagccatcttcaggaggaaaagaagtgctttata
tgtgattctcgggaaccttacaatgaacaaaataatacagaaagtcactgtattgaaaat
gtagtcaccacatttgcaccaaatcgacttaacttatggtggcaatcagtgaatggactg
gagaatgttacaatccagctggaccttgaagcggaattccacttcactcatctcatcatg
acctttaagacgtttcgaccagctgcaatgttaattgaaagatcatctgattttgggaaa
acctggaaagtatataggtattttgcatatgactgcgaggcttcatttcctggtattttc
actggaccgatgaagaaagtagatgatataatttgtgattctcgatattcagacattgaa
ccttcaacagaaggggaggtaatttatcgtgttttggatcccgcctaccgaattgaagat
ccatatagtctgaggattaaaagtatgttaagaattacaaacttaagagtcaaattcttg
aagcttcatacattgggggacaacttgctggattctagagtggaaataaaagaaaaatac
tattatgcaatttatgacatggtagttcgtggaaactgcttctgctatggccatgcaagt
gaatgtgccccagtaaaaggatattctgacaatgtggagggaatggtgcatggacgctgt
gtttgcagacataacacaaagggtttaaactgtgagcaatgtctagatttctaccatgat
ttgccttggagaccagcagaaggtcgtagtagcaatgcttgtaaaagatgtaactgtaat
gagcattctacacactgtcattttgatatggctgtttatatgtctactggaaataccagt
ggaggagtgtgtgatgactgccaacataacacaatggggcggaactgtgaacagtgcaaa
ccatttttctaccagcatccagataaagacatacgtgatccaaacatctgtcaaccctgc
aattgcgacccagctggatcccaggatggaggaatatgtgaccgctattcagatttctca
gtgggttttattgctggacagtgtcgttgcaaattaaacgttgaaggagagcgttgtgat
cagtgtaaagaaggtttctatgacctaaatgcagaagatccagaaggctgccagtattgc
ggatgtaaccccctagggactatccctggtggaaactcttgtgactctagaaatggaaac
tgcttttgcaaacgctttgtaacaggaaggaaatgtgatcagtgttcgcctgagttctgg
ggtttgagtaatgacttggatggctgtcgaccttgtgactgtgatcatggaggagcagag
gacaataattgctcacctgaatctggtcagtgccaatgcagaccacacatgattggacgt
cagtgcaatgaagtggagtcgggcttttattttatttctttagatcattacacctatgaa
gcagagtatgcaaactttggccctgaggtccgaattgttgaaagatcacttcctcatgat
cgaaccccttcctggactggtattgggtttgcaagagttccagaaggtgcatacttagaa
ttccacattaatgacattccaacatccatggagtatgatctgttaattcgctatgagcct
caactaccagagcagtgggaagaagcagttatcacagtattgcgcccaggcaagattccc
actagcagccgttgtgggaacactgtcccaagtgatgataatcagtcagtggcattacca
cctggttctcgctatatcactcttcctcgtcctatttgctttgagaagggattgaattac
acaatacgtttggagctgcctcggtattctgtgaattccaatgtggaaaatccatacaca
ttaattgattctattgttttgctgcctcatgtcaagtcccttgacatatttagtatggga
ggctcaggagatgatgtcaccaccaacactgcctggcaaacattccagagatacagatgt
cttgagaacagccagagtgttgtaaaaactcctctcactgatgtgtgcaagaattttctc
ttcagcatttctgcacttttacacaaaggtgccttggaatgtcattgtaacccgcaagga
tctttgagttccgtatgcgatccaaatggtggtcaatgccagtgccgtcccaacgtcatt
ggaagaaactgtgacaagtgtgaccctggaacctttggctttggacctagtggatgcaaa
ccttgtgagtgtgatgtgcgaggatcttctcatgctttttgccaccctgaaactggtcaa
tgtccctgcattcatggagcatacgggcgtcagtgtgatatctgcttacctggttactgg
ggtttcccaagctgtaggcagtgccagtgtaatggacatgctgaagactgtaatgtactt
actggagagtgcacaaattgtaaggaccataccgaaggatacagctgtgaacggtgtctt
tcaggttactatggagatcccagacttggatcaggggatcactgcagaccctgtccatgt
cctgacggtccaggtagtgagcgtcagtttgccagtggttgttacaaaaatcctacaacc
ttgcaggtggtgtgcacttgtaatatggggtatacaggaatacgatgtgatggatgttca
tctgggtattttggaaaccctgaagagattggcggagtgtgtcaaccatgccactgcaat
aacaatatcgatatggctgacccacttgcctgtgataaacagtcaggattatgcttgaag
tgtctgtatcacaccgaaggggacaactgccagcagtgtcaattaggatactatgggaat
gcccttcaacaggattgtagaagatgtgtttgcaattaccttggtacagaacaggagcac
tgcactggagaaatagaatgtcactgcagtaggacaaatgggcagtgcccatgcctgccc
aatgtgattggacagagttgtgatcgttgtgaaacaaatacctggaatttagcaagtggg
actggctgtgaatcatgtgcatgtaacaccaatcgatctctagggttatcttgtaatgag
ttcacgggccagtgccagtgcatgcctggatttggcggacgggattgcagtgaatgccag
gaacttttctggggaaatccagacatcgagtgcagagcttgtgattgtgactctagaggc
atccagacatcacagtgtaatcgtgctacaggacattgcatttgtaaagatggagttgaa
ggagttcgctgtgataagtgtgctcgtggatattctggtacattcccaaattgcacacct
tgtcacaactgttttaccttgtgggatgtcattatccaagagctttctaacaaaacaagt
cagcttctaaaccgtaccaatgccctgaagatctctggcattattggaccataccaacag
actgtagataaagtgcaagagaaattagatgaaatcagaagcattctggctaataatcca
gcttcacatccacttaaaaacattgagaatctccttgaggaagcagagaagctaaaatct
gaagtttcccaaagagcagctgaagtggagatgaaactagcagaaattaaaacgaatgac
acagagaagcttgatgctcttcaggcagatgctgaaagctttggacaagcattaaaagaa
cttggagagcagttagaatttatgaaaatctctaatgtgcagggcgccatggacagcatc
aacaaatatttccaaatgtctctggaggcacaagaaaaggtcaatgtgtctgtgtccaat
ccagatagcgtaattgaacattcagctgctacacgacaggaagtggaaaatctaataaat
gaaaactattctcagtttaagaaagagcaagaggagcagactcgattgttggatgaactt
gctggcaatgggcaaagtttggatctctcttcactttctgaaaagacttgtggcaactct
cctggtgtgctctgtgaagattctgaatgtggaggccttaactgcaagacagatgatgga
aagagaaaatgtggtgggccaggatgtgggggtctggtaactgtagcccacagtgcctgg
aaaacagccacaagttttgacacagaaattcaaaatgcactggcagaagtagaagaattg
tctaaaatggttgcagagtcaaagttgagggcagaagaagctaagctaaatgctcaggat
gtcctgaacaaagcaaatgccaccaaggaaaaagtgaaccggagcaatgaagacttaaga
aatctcatcaaacagataagagagtttttaatgcaagatggtgctgatctggatagcatt
gaagcggttgctagcgaagtactgaaaatggaaatgcccactacccctgaacaactacag
aaattgactgaggaaatccgtgaacgggtagaaagcctttctggtgtagacaaaatcctc
aaacagagtgctggggatattgcaagagcagaggctctcctagatgaagccaaagaatca
agcaaaagtgctgcagatattaaagcaacagtcgatgctgtgaaggaagcattagaagaa
gcgggaaaagctcaaagtgctgctgaaaaagccattaagagagcagatgatgatatcaaa
gggaccaatgatctgctcacgtctattgaatctgaaacagcagtgtctgaagagacctta
aataatgccacaaaacggcttgttcaactagaaaaaaacattgacgatctaatgaagaag
tcagctgccaactcgcagacagcaaatcaggttgaaaagtctgtaaatgaagtgaaagcc
agtgctgatggagctaaaaaggttctggatggggaacttaacaataaatataagacagtt
gaagatttgatagcaaagaaagcagaagattctgaagaagccagaaagaaagctcaagaa
ctacagaaggaagccaaagggttgctagaacaagcaaataaaaaattagacacaatcaaa
gatttagaaaagacgtatgaaggtaatgaaaggattctagaagaaaaagcaaaacagtta
gtacaactggaagaaacagtccgatctattctccaagccatcagccagaaagcagcagta
tatagcacatgcttataa
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integrated database retrieval system