Xenopus laevis (African clawed frog): 108711384
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Entry
108711384 CDS
T01010
Symbol
myo5c.L
Name
(RefSeq) unconventional myosin-Vc isoform X2
KO
K10357
myosin V
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108711384 (myo5c.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
108711384 (myo5c.L)
04131 Membrane trafficking [BR:
xla04131
]
108711384 (myo5c.L)
03029 Mitochondrial biogenesis [BR:
xla03029
]
108711384 (myo5c.L)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
108711384 (myo5c.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108711384 (myo5c.L)
mRNA cycle factors
P-body specific factors
108711384 (myo5c.L)
Membrane trafficking [BR:
xla04131
]
Others
Actin-binding proteins
Myosins
108711384 (myo5c.L)
Mitochondrial biogenesis [BR:
xla03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108711384 (myo5c.L)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108711384 (myo5c.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
108711384
NCBI-ProteinID:
XP_018108558
Xenbase:
XB-GENE-6487722
UniProt:
A0A974HTS3
A0A1L8H0N5
LinkDB
All DBs
Position
3L:107362950..107420080
Genome browser
AA seq
1719 aa
AA seq
DB search
MALLAELYTQFNRVWIPDTEEVWRSAEITKDLKIGDTVLHLCLEDGTNLKYPVDPEKQVL
PPLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESNVIYTYSGIILVAINPYKELPIY
GDAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRY
FATVSKTSSKAHVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYKIIGANL
RTYLLEKSRVVFQSENERNYHIFYQLCASANKPEFGHLHLTRAEEFNYTSMGGCTVITGV
DDKKDMIDTQKTFALLGLSTDFQMDVFKTIAAILHLGNVDIKRVSDDRSSVNVDDKHLKI
FCDLLELDTSKVAQWLCNRRIVTVSDMVIKPMTKHQADNARDALAKKIYSHLFDHVIVKI
NNALQYPGKQHTFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMK
EDIPWTLIDFYDNQIVIDLIEAKMGILDLLDEECLLPQGTDENWLQKLYNNYINKNPLFE
KPRMSNRSFIIQHFADKVEYKCDGFLEKNRDTVYDVLIDLLKSSKFQLCSSFFQDSTNKS
SAFSSGIHVKSARPVIKSSNKELRMTVGSKFRTSLCLLMETLNATTPHYVRCIKPNDLKL
PFEYDAKRVVQQLRACGVLETIRISAQSYPSRWTYIEFFGRYSILMTQQEMAINDKKHIC
KVVLQRLIQDSNQYQFGRTKIFFRAGQVAYLEKLRSDKLRNACVVIQKNVRGWVQRKKFN
RARNSAIVIQQYFRGQRAIRQAITGTALKHAWAAIIIQKYVRGFLVRRIYQLILVATVTI
QSFTRGHLARKRYHKIREEHKAVILQKYARAWLARRRFQNVRRFVLNIQLSYRVQRLQKK
LEDQNKENHGLLERLTSLASSHTNDVDKVHKLEAELEKTVSQKKNQEEKGKKYKEDSDEK
IAKLQTQNAELLEQKHQLEVKLETQTQEVKDQMDQLTNQLFSDVEKEEKQRMKLEKHFEA
QVNEFDAMIEKLKDEIQALKERNKHLVKQAEEEQLLNDGLREEIDQLSIQVKKIPTFQTD
IELLENQKRELEHQLQAQKREMREKLDEMAKHLLNSFEIEDVKARLAEEELGNLNEDGEI
WFAYEGLKKATRILEAHFQTQRENYEKEIELLNFKVEHLNDDIKQIQKSYTEEKDSKELI
TQEVARLRSDNKVVKGLKKKLAELEEQNMDLQGRLYEQTMKLPEKSNRRKHYPEDDEVSL
KLWNGQRENDVANVKIQAIQTDNIYMKEQNETDTRDFEEQADMKDRTIKKLQDQIKALTK
SIEKDDQVKVPTVFKDYLGMLEFAPENETKLIRNLILDLKPRGVVVNMIPGLPAHIMFMC
VRYTDYINNAERIKSLMNASINNIKQVIKEHADDFEMLSFWLSNVHHFLNCLKQYSGEEE
FMKYNQPLQNKNCLKNFDLSEYRQIISDLAIRIYHQFITVMENNIQPMIVPGMLEYESLH
GISVSKPTGFRKRSSSIDDTDAYTMTSILQQLSYFYTTMCQHGMDPELLKQTMKQLFFLI
STVTINSLFLRRDMCSCRKGMQIRCNISYLEEWLQDKNLHGATAKETLEPLSQAAWLLQV
KKITDEDAKEIYERCTALSSVQIVKILNSYTPIDDFEKRVTPSFVRKVQSMLSNREDGSQ
LMLDSKYLFQVTFPYSPSPHALEMIQIPSSLKLGFLTRI
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttagctgagctgtacactcagttcaacagggtctggatccccgatacagag
gaagtgtggcgctctgctgaaattacaaaggatcttaagatcggggacactgtgctccat
ttgtgtttggaagatggaactaacttgaagtacccagtggatcctgaaaagcaggttctt
ccccctctaagaaatccagatattcttgttggtgaaaatgatctcacggccctcagttat
ttgcatgagccagctgttctgcacaatctcaaagttcggtttgtggagtccaacgttatc
tatacatacagcggtattatcttggttgcaatcaatccatacaaggagctcccaatatat
ggagatgcaattattcatgcatacagtggacagaatatgggagacatggatccacacata
tttgctgttgcagaagaggcctacaaacaaatggcaaggaacaataggaatcagtccatt
attgttagtggagaatctggagcaggaaagacagtgtcagcgcgatatgctatgcggtac
tttgccacagtcagtaaaacaagcagcaaggcacatgtggaagataaagtgctggcgtcc
aatccaataacagaggctattggaaatgcaaaaacgactcgaaatgataacagcagtcgc
tttggaaagtataccgaaatcagttttgacagaaggtataaaattattggtgcaaacttg
agaacgtatcttctggaaaaatcccgcgtagtctttcagtcagaaaatgaaaggaattac
cacatattttaccaactctgtgcttctgccaacaaaccggaatttggacaccttcatcta
acgagagcggaagagttcaactacacttcaatgggcggctgcacagttataacaggagtt
gatgacaaaaaagatatgatagatacccaaaagacatttgctttattaggtttaagcact
gactttcagatggatgtatttaaaaccatagcagctatcctacatttaggaaacgtggac
atcaaacgtgtcagtgatgacagatcctctgttaatgtagatgacaaacacttgaagata
ttttgtgatcttctggaactagatacctcaaaggtggcccagtggctttgcaaccggaga
attgtgaccgtatcagacatggttataaagcccatgaccaaacatcaagctgataatgca
agggatgctttggccaaaaagatctactcccacctttttgatcatgtcattgttaaaata
aataacgcattacagtacccagggaaacaacacacatttattggtgtccttgatatttat
gggtttgaaacatttgaaattaatagttttgaacagttttgcatcaattatgccaatgag
aagttgcagcaacagttcaaccttcatgttttcaagcttgagcaagaagaatatatgaaa
gaagacatcccatggactctcattgacttttatgataatcaaatagtcattgacctcatt
gaagcaaagatgggtattttggacctgctagatgaagaatgcttgctgccacaaggaaca
gatgagaattggttgcagaagctgtataataactacatcaacaagaaccccttgtttgaa
aagccccgaatgtccaacagatcattcattatacaacactttgcagataaggtagaatac
aagtgtgatggatttttggagaaaaaccgagacactgtgtacgatgttttaatcgatctt
ctaaaatctagtaagtttcagctgtgctccagtttttttcaagacagcacaaacaagtca
tcagcattcagttctggaatccatgtgaaatcagcaagacctgtgataaaatcatcaaat
aaagagctcagaatgactgtgggcagcaagttccggacctcattatgtttgctcatggag
acccttaatgcaacaactccacactacgtacgatgcataaagcccaatgatttaaaactt
ccatttgagtatgatgccaaaagagtagtgcaacagctgcgagcatgtggtgttctagaa
accataagaatcagtgcacaaagctacccttccaggtggacatacattgagttctttggc
cgttacagcattcttatgactcagcaggaaatggccataaatgataagaaacacatttgc
aaagtagtcctgcaaagactgatccaggattccaaccaatatcagtttggaagaacaaaa
atcttcttcagagcaggccaggtggcttacctggaaaaactgagatctgacaaacttagg
aacgcctgtgttgtaatacaaaagaatgtacgaggctgggtccaaaggaagaaatttaac
cgtgccaggaattcggccattgtcatacaacagtacttccggggccagagagctattagg
caagcaataactggaacagccctgaagcatgcatgggcagcgatcattatccaaaaatat
gttcgaggattcttagtccgtcgcatctaccagcttatcctggtggccacagtgactatt
cagtcattcacacgtggtcacttggctagaaagaggtatcacaagatacgagaagagcac
aaggctgtaatactgcagaagtatgcccgtgcttggctggcaaggcgcaggttccagaat
gtccgtcgttttgtgctcaacatccagctttcctacagggtgcagcgtctgcagaagaaa
cttgaagatcagaacaaagagaaccatgggctgttagaaaggctgacaagcctggcctca
tcacacacaaatgatgtggataaagtgcacaaacttgaagcggagctggaaaaaacagtc
tcgcaaaagaaaaatcaagaagaaaagggcaagaagtacaaggaagactctgacgagaaa
attgcaaagcttcaaacacaaaatgctgagcttcttgagcagaaacatcaactggaagtt
aaacttgagacccaaacccaagaagtgaaagatcagatggatcagctcactaaccaacta
ttctctgatgtggagaaagaagaaaagcaaagaatgaaacttgagaaacattttgaggcc
caagtaaatgaatttgacgcaatgatagaaaagctaaaagatgaaattcaagctttaaag
gagaggaacaagcatcttgtgaagcaggcagaagaagagcaacttctcaatgacggttta
cgagaggagatagaccaactatccattcaagttaagaaaataccaacatttcaaacagat
attgaacttcttgaaaatcagaaaagggagttagaacaccagctacaggcgcaaaagcgt
gaaatgagagaaaagttggatgaaatggcaaaacaccttctgaacagttttgaaatagag
gatgttaaagctaggctggctgaagaggaactaggaaatctaaatgaagatggagaaata
tggtttgcttatgaaggtctgaaaaaagcaaccagaatactagaagctcattttcagacg
cagagagagaactatgaaaaggagattgagttgttgaactttaaggttgaacacctcaac
gatgacattaaacagatacagaaatcttacacggaggaaaaagactcaaaagagctcatt
actcaagaagttgcaaggctgagatctgacaataaggtggtaaagggtcttaagaaaaag
ttggctgaacttgaggaacaaaacatggatctacaaggccgtctctatgaacaaactatg
aaactgcctgaaaaatctaaccgaagaaaacattatcctgaagatgatgaagtatccctc
aaattgtggaatggccagagagaaaatgatgtggcaaatgtaaaaatccaagcaattcag
acagacaacatatatatgaaggaacaaaatgaaacagacaccagggactttgaagaacag
gcagatatgaaagaccgaacaatcaagaaactgcaagatcagataaaggctctaacaaag
tccattgaaaaagatgatcaagtaaaggtgccaacagtgtttaaagattatttgggaatg
ctggagtttgctccagaaaatgaaacaaaactcatcaggaatcttatccttgacctcaaa
cctcgtggtgttgtagtcaacatgatccctggcctcccagctcatattatgttcatgtgt
gtgcgctacacagactacataaacaatgctgaaagaatcaaatctctgatgaacgcatcc
attaacaacatcaaacaagttattaaggaacatgcagatgattttgagatgttgtcattc
tggctttccaatgttcatcattttctcaactgcttaaagcaatacagtggggaagaggaa
tttatgaaatacaaccagccccttcagaataagaactgtttgaagaattttgatctgtca
gaatatagacagattatcagtgatttggccatccggatataccatcagttcattactgta
atggagaacaacattcagccaatgatagtgcctggcatgctggaatatgaaagtcttcat
ggaatttcagtctccaaaccaacaggattccggaaacgctcatctagtatagatgacaca
gacgcttacactatgacctccattctccagcagcttagctatttttatacaactatgtgc
cagcatggcatggaccctgagctcctgaaacaaacaatgaagcagctttttttcctgatt
tctactgtaaccatcaacagtctttttcttcgcagggacatgtgctcatgtagaaaagga
atgcagattcggtgtaatatcagttaccttgaagaatggcttcaagacaagaaccttcat
ggagctacagccaaagaaacactggagcccctttcccaggcagcatggctgttgcaagtt
aaaaaaattacagatgaagacgccaaagaaatatatgaacgttgtactgcactttcatct
gtgcagattgtgaaaatccttaactcatacactccgattgatgattttgagaaacgtgta
acaccttcctttgtacgcaaggtccagtccatgttaagcaacagagaagatggctctcaa
ttaatgctggatagcaaatacctcttccaagtgacatttccttacagtccgtctcctcat
gcactggagatgattcaaattcccagcagtctcaagcttggcttcctaacaagaatctga
DBGET
integrated database retrieval system
