Xenopus laevis (African clawed frog): 108711465
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Entry
108711465 CDS
T01010
Symbol
aff1.L
Name
(RefSeq) AF4/FMR2 family member 1 isoform X1
KO
K15184
AF4/FMR2 family member 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
108711465 (aff1.L)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
108711465 (aff1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
108711465
NCBI-ProteinID:
XP_018108715
Xenbase:
XB-GENE-6488271
UniProt:
A0A974DYX5
A0A1L8HVR5
LinkDB
All DBs
Position
1L:91214770..91321884
Genome browser
AA seq
1166 aa
AA seq
DB search
MTRIAMAAQSSLYNEERNLLRLRERERRNQEVHQEKETFIDCAPLFPEPYKTSKGDELSS
RIQSMLGNYEEVEEPIGANGNIHISDISKSGVAVSTLQKTERQRVGPPISSTAVSSRHHQ
RPQTDNDIPSWQLIKSHSSVRSHTQDLIPFEQRSRTKTKNKNGKRLKEYDCTEQSSSPSS
ISALSPLLSSLSSPIKPLSPLHSTQQTDSKPQTDETEDKAYRHATPVHNDTGNRDGPASV
TNLITATQTFPSSMSSKASAMPQKPTAYVRPMDGQDQVLSESPYIKPLQEDYYEESYGNL
TDEKLSKLENPSETFDTLSNEAQCVEEILKEMTHSWPPPLTAIHTPSTSEPSKFSFPSKE
NQRVPSVKGNQKQYDTSSKQLPSPQQGTSMLEDDLQLSDSDNSNEDEVCEKPSSSAPPSV
LQSQTNSVVSAHSSSVESESSESDSSSDSGSEDISSDNEVIEPPRVPTPEPDPDIWQLRH
YMNKVGQSAAPVENHNLVDQELSSQWESKTQGSIPPSPHESPKNLETSHKTSPWTSPEQV
QNKEDCPESPVVSKTVTPRQTAGIKQPSKSFKSLGPEEPNVGLKVESEPYRPRDQPSKEK
PSVKTKDKIELNVCKDTKASIAQTSEKKKHKSSHHVSSSKKCSNSLSEKSHSTHSLPQCS
HNALSVTSVKVQSKANNRTHLSHPAVVVRENLHKDKVLLPIGDNRLPPLTNNHKTCSLVV
KIELSLLSNVPGVAIKANQLKSKKESCKETTSLRKEESQKKHSKNHSKEHTKRKVEEGER
NVTHKKIKLETETQSNSSHKQLPTKKALKESSESFSKKHRQEKPMSPTEHTQKKPEKLPQ
KRHPSENTTCSQLSTTTSKSNQKEPSSSKHRKLEEKLSHHVKTSKGSAENNTNPFPVPSL
PNGNAKPTRPQLKFEEKLLSPEHYMKEAKKLKHKADAMSDKIGKSFNYLDAAMFFIECGI
AMEADVQAPKSAYTMIAETVDLIKFILKLKNFTDSSAPAYEKSFAVLCMRCQSVLYMAMF
RYKKDTAIKYSRTLGEHFKSSSRAAQVPSPCVTRSTGTPSPLSPTPSPASSGGSQPGSIA
SNSGSSSVAIPQMIHHIASSYVNITSYFLYAYDIWEQADLLAKKHKEFFADLSTVVCPLA
LNSPMDKLVHYTRQGLQWLRLETSLT
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcatcgctatggctgcccagtccagcttgtacaatgaagaaaggaatctgctt
cgactcagagaacgagaaagacgaaatcaagaagttcatcaggagaaggaaactttcatt
gactgtgctcccctgtttcccgaaccctacaagacaagcaaaggagatgagttatcaagt
cgaattcaaagcatgcttggtaattatgaagaagtagaggagccaattggtgcaaacggc
aatatacatatatctgatatttccaaaagtggtgtagcggtttccacactgcagaagact
gagcgacagagagtagggcctcctatttcctctactgctgtatcttctagacaccaccaa
aggcctcaaacagacaatgacatcccttcttggcagctaattaaaagccacagttcagtt
cgaagtcacacacaggatctcataccttttgagcagcgcagcagaaccaagacaaagaat
aagaatggtaagagacttaaggaatatgactgtactgaacaatcgtcctctccttcctcg
atttctgccctttctcctcttctttcctccttgtcttctcccatcaagcccttgtcccca
ttacattccacccaacaaactgattccaagccacaaactgacgagaccgaggataaagct
taccgccatgctactccagtccacaatgacacagggaacagggatggtcctgcatctgtt
acaaatctgataactgccactcaaacctttccatcatccatgtcttcaaaagctagtgct
atgcctcaaaaacctacagcttatgtgcgcccaatggatggacaagatcaggttcttagt
gagtctccatatataaaacctttgcaagaagactattatgaagagtcttatggaaacctt
acagatgagaaattatcgaagttggaaaatccttctgaaacatttgataccctttccaat
gaagcccaatgtgttgaagagatacttaaggaaatgacccattcatggcctccaccactt
acagctattcatacacccagcacttctgaaccttccaaattctcatttccctcaaaggaa
aatcaacgtgttccatctgtcaaagggaaccagaaacagtatgacacctcttcaaagcaa
ttgccaagtccacagcagggaacatccatgctggaagatgacctccaactcagtgatagt
gataacagtaatgaagatgaggtctgcgaaaagccatcgtcttctgctccaccaagtgtc
ctgcagtcccagaccaacagtgtggtttcagcacattccagcagtgtagaatcagaaagc
agcgagtcagacagctcgtcagattctgggagcgaagacatctcaagtgacaacgaagtg
attgagcctccaagagtgcctactccagagccagatcctgatatatggcagttacgccat
tatatgaataaagttggacagtctgcagcaccagttgaaaaccataaccttgtggaccag
gaactatcaagtcagtgggagagtaaaacacaaggaagtattcccccctctcctcatgag
tccccaaagaatttagaaacatcccacaaaacatcaccatggacttctccagaacaagtt
cagaataaagaagactgcccagagtctcctgtggtcagtaaaactgttactccaaggcag
acagctggcataaaacagccaagcaagtctttcaaatctttggggccagaagagccaaat
gtgggacttaaagtagaaagtgaaccttacaggcctagagatcagccttccaaagagaag
ccatctgtgaaaacgaaagataaaatagaattaaatgtttgtaaggacacaaaagcaagc
attgcacaaaccagtgaaaaaaagaagcacaagagttctcatcatgttagtagcagcaaa
aagtgttcaaatagtctttcagaaaagagccattcaacccattcactcccacaatgctcc
cacaatgctctctcagtgacttctgtgaaggtgcagagcaaagccaataataggacgcat
ctttctcacccagcagttgttgtacgtgagaatttacacaaagacaaagtgttattaccc
attggagacaatagactaccaccacttactaacaaccacaaaacgtgttcccttgttgtt
aaaattgagctatcactactttcaaatgtcccaggggttgctataaaagcaaaccagctt
aaaagtaagaaggaaagctgcaaagaaacaacttctttgagaaaagaagagtcacagaag
aaacactctaaaaatcacagcaaagagcatacaaagagaaaggtggaagaaggagaaaga
aatgtaacacacaagaaaatcaagttggaaacagaaacacaatcaaattctagtcataaa
cagctgcctacgaaaaaagcacttaaggaatcctctgaaagtttttccaaaaagcatcgg
caagagaaaccaatgtctcccacagagcacacacagaagaaaccagagaagctgccacaa
aagaggcatcctagtgaaaataccacctgcagccaactgtccacaacaacgagcaaaagc
aaccaaaaagagccttcctcttctaagcacaggaaattggaggaaaagctctctcatcat
gtgaaaactagcaaggggtctgcagaaaataacacaaatcctttcccagtgccttctttg
ccaaatggtaatgccaagccaacaagaccacagctcaagtttgaagaaaagttactttca
ccagaacattacatgaaggaggccaagaaactaaaacacaaagctgatgccatgtcggac
aagatcggaaagtcgttcaactatttggatgctgccatgtttttcattgaatgtggtatt
gcaatggaggctgatgtacaggccccaaagtcagcctacaccatgattgctgaaactgtt
gatctcattaaatttatattaaagttgaagaacttcactgactcctctgcacctgcatat
gaaaagtcctttgctgttttatgtatgcgttgccagtccgttctttatatggcaatgttt
cgatacaaaaaagacactgcaataaagtattctcgcactcttggagaacacttcaagagt
tcttccagagctgcacaagtaccttctccatgtgtcacaagaagcactggtacaccgtcc
cctctgtctcctactccttctcctgccagctctggaggatctcagccagggtccattgct
agcaacagtgggagctcttcagttgccattccacagatgatccatcacatagcatcatct
tatgtcaacataacctcatatttcctgtatgcatatgatatctgggaacaggctgatctc
ctagcaaagaaacataaagaattctttgcagatctaagtacagtggtttgccctctggct
ctcaacagccctatggataagctggtacattacactagacagggattacagtggctgaga
ctggagaccagcttgacttaa
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