Xenopus laevis (African clawed frog): 108711719
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Entry
108711719 CDS
T01010
Symbol
rfx1.L
Name
(RefSeq) MHC class II regulatory factor RFX1 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108711719 (rfx1.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Other basic domains
RF-X
108711719 (rfx1.L)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX1_trans_act
RFX_DNA_binding
ThermoDBP-RP_arch
Motif
Other DBs
NCBI-GeneID:
108711719
NCBI-ProteinID:
XP_018109199
Xenbase:
XB-GENE-6486029
UniProt:
A0A8J0UTH3
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Position
3L:150692365..150723858
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AA seq
880 aa
AA seq
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MATQAYVTELQAAPPAPTQGTSQQYVAELQVTQQTTPGSSQSAGSQTPTAQQYIVVTVSE
GSVRGSDGELSPEGTPTPTAAVATQVVQQVQAAQQRLLLEARVQPKITAVSPLQLTGSSL
PQQRLVVQSSPQGTKAAQVSLTVHTVQQPALSPSDGDSPSLKAGQAQPLQLHGTQQERSV
VQANPQKSSPVHQLTVQALQHVQGTPEVQQLQQVPVQHVYPSQVQYVEGTDTTYTGGTIR
SGSYSYTETPLYNQATGSTYYESQGATGQVSSPTSSPALASSPSLPMYVSGGQILTNTTQ
SAASGGTGAGASGSGTYVIQGGFIMGSSTQSYSHTTRASPATVQWLLDNYETAEGVSLPR
STLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSS
LMRLMEDQQHLAMRQQPFSQKQRLKAVQKMEGMSNGVGGSQQQTPGLSDISSQVQQYQQF
LDGSKTLPEFAEIDLQGKPLPDDITLANVKAFQLLYREHCEAIVDVVVNLQFTLVETLWK
TFWRFNQAQHSDNAIDDEAEKRLPKDCLVLLSKYEPLLKWSRDCDHLLYQVLVETLIPDV
LRPIPSALTQAIRNFAKSLESWLTSAMMNIPEEMVRIKAGAASAFAQTLRRYTSLNHLAQ
AARAVLQNTAQINQMLSDLNRVDFTNVQEQASWVCRCADRVVQRLEQDFKLTLQQQSSLE
QWAEWLDSVVSQVLKPYQGSPGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIR
LLYDEYMYYLIEHRVAQARGETPIAVMGEFATPGNTLRSLDQEKEEEEEEDDESDEDLAH
ELPLTMNDPSNTLGCDSLEPPAKLARSDSQGIFVQVPPTS
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggccacacaggcctatgtgacagagctccaggcagctccacccgctcccactcagggc
acctcacagcagtatgtggcggagctgcaggtcacacagcagacgacccctggcagctcc
cagtcggcaggatcccagactcccactgctcagcagtacattgtagttactgtctcggaa
gggtcagtgagaggcagtgatggagagctcagcccagagggaaccccgacacccacagcc
gcagtcgccacacaggtggtacaacaagtgcaggcagcacagcagaggctgctgttagaa
gcaagggtgcagcccaaaatcactgcagtctccccgctgcagctgactggatcatcgcta
ccccagcaacggctggtggtgcagagctctcctcagggaactaaagcagcacaagtctca
ctaacagtacacaccgtgcagcagccagcactctccccatctgatggggacagcccatct
ctgaaggcaggacaagcccaaccattgcagctgcatggaacacaacaagagcgatcagtc
gtacaggcgaatcctcagaaatcctcccccgttcatcagctgacagttcaggctctacag
catgtccaggggaccccagaggtccagcagctgcagcaagtcccagtgcaacatgtatat
cccagccaggtgcaatatgtggagggaactgacaccacatatactggaggcaccatccga
tccgggtcctactcctacactgagactcctctgtacaaccaggctacgggatctacttac
tacgagtcccagggagccacagggcaggtcagctctcccacctcctccccagctttggcc
agcagcccgtcgttgcccatgtatgtgtctggggggcagattctcaccaacaccacccag
tccgcggcctcaggtggaactggagcaggtgctagtggatcaggaacctacgttatccag
ggtggatttatcatgggcagctctactcagtcctactctcataccacacgggcctcgcca
gccacggtgcagtggctgctggataactatgagacggccgagggggtgagcctaccccgc
agcaccctttattgccactacttactgcactgtcaggagcagaaactggagcctgtaaat
gccgcctcttttgggaagctgatccgctcagtcttcatgggcttgcgaacccgccgactg
ggcacaagggggaactccaagtaccactattatggcctgagaatcaaagccagctcctca
ctaatgcgcctgatggaggatcagcagcaccttgctatgcggcagcagcccttctcccag
aagcagagacttaaagctgtccagaaaatggaaggaatgagtaacggggtcgggggctcc
cagcagcagactcctggtctgtccgacatcagttctcaggtgcagcagtaccagcagttt
ttagatggctcaaagacacttccagaatttgcagagatcgatttgcaggggaagcccctc
cctgatgatattaccctggccaatgtaaaagctttccagctgctgtacagagagcactgc
gaggctatagtggacgtggttgtgaatttgcagtttaccctggtagagaccctgtggaaa
accttttggaggttcaaccaagcgcagcacagtgataacgcaatagatgatgaagctgag
aagcgtctgcctaaggactgcctggtgctgctctcaaaatatgagcctttgcttaaatgg
agcagagactgtgatcatctcctgtatcaggttctggtggagacactcataccagatgtt
ctgcgccccataccaagtgccctgacacaagctattcgcaactttgcaaagagtctggaa
agctggctaaccagtgcaatgatgaacatacctgaagagatggtgcggattaaggctggc
gctgcaagtgcctttgcccagacgctgcgtcgatacacgtctctgaatcacctggcgcaa
gctgctcgtgccgtgctgcagaacactgctcagatcaaccaaatgctcagcgacctcaac
cgagtcgatttcaccaatgtgcaggaacaagcctcctgggtgtgtcgctgtgcagaccgg
gtggtacagaggctggagcaggatttcaagctgacacttcagcagcagagttccctcgag
cagtgggccgagtggttggatagtgttgtctcccaggtgctgaaaccttaccaggggagc
ccaggatttcccaaagcggcgaaactcttcctgctgaagtggtccttctacagctcaatg
gttataagggatctgaccctccgcagcgctgccagttttggatctttccacctgattcgg
ctgttgtacgatgagtacatgtactacctgatagagcaccgcgtggcacaggctcgtggg
gagactcctatcgctgtcatgggagagtttgcgaccccaggaaacacattgcgctccctc
gaccaagagaaagaggaagaagaggaagaggatgatgagagtgatgaagatctggctcat
gagttgcccctgaccatgaatgacccctccaacactttgggctgtgactcgctagagcct
cctgctaagctcgcaaggagcgactcccaagggatctttgtgcaggtgcctccaacctcc
taa
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