Xenopus laevis (African clawed frog): 108712229
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Entry
108712229 CDS
T01010
Symbol
csgalnact1.L
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
xla01100
Metabolic pathways
Module
xla_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
108712229 (csgalnact1.L)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xla01003
]
108712229 (csgalnact1.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
108712229 (csgalnact1.L)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
108712229 (csgalnact1.L)
Glycosyltransferases [BR:
xla01003
]
Glycan extension
O-Glycan
108712229 (csgalnact1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
Myc-LZ
DUF4618
Motif
Other DBs
NCBI-GeneID:
108712229
NCBI-ProteinID:
XP_018109758
Xenbase:
XB-GENE-17331842
UniProt:
A0A974E024
A0A1L8HW87
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Position
1L:104135344..104356449
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AA seq
529 aa
AA seq
DB search
MVRRGLLSWISRVGILLVCLCCVVSVLYMLTCTPRSEDEQLLLPRANSPTGKEGYHAILQ
EQEEEHRNYIASLKKQIAQLKDELQQRSEQLKTVQGPYSESVGVAFDHGSPEKAQNDLID
FLHSQVNKAEVHNGIKVPTEYAAIPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDELAE
TLDVALDALNSPDEDGNSHRKVYTSADFIEGIYRTERDKGTLYELTFKGEKSQEFKRLVL
FRPFGPIMKVKNERLNMAKVIMNIIVPLAKRADKFQQFMQNFREVCIRQDGRIHLTVVYF
GKEQAQEVRSILENTSKAANFKNFTFIQLNEEFSRGKGLDVGARAWKGSNVLLFFCDVDI
YFTAEFLNSCRINTQPGKRVFYPVLFSQYNPAIIYGHHDAIPSIDQQLVIKKDTGFWRDF
GFGMTCQYRSDFINIGGFDLDIKGWGGEDVHLYRKYLHSNLIVIRTTVRGLVHLWHEKRC
MDELTPEQYKMCMQSKAMNEASHGQLGMLVFRHEIEAHLRKQRVGIKKS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggtacgacgaggtttactcagctggatttctcgtgttggaatcctactggtctgttta
tgctgtgttgtgtcagttttatacatgctaacatgcactccgaggtctgaggatgaacag
cttttattaccccgagctaatagccctacaggaaaagaagggtaccatgctatcttacag
gaacaagaagaagaacatcgaaattacattgcaagcctaaaaaagcaaattgctcagctg
aaggatgaacttcagcaacgcagtgagcagttaaaaactgttcagggtccctacagtgaa
tctgtaggtgtagcctttgatcatggaagccctgagaaggcccaaaatgacctgatagac
tttttgcactcacaggttaacaaagctgaagtacacaatggcatcaaagttccaacggag
tatgcagctattccctttgatagtttcactttacaaaaagtataccagctagaaacaggc
cttacacggcatccagaggaaaagcctgtccgcaaggacaagagagatgaacttgcagag
actttagatgtagcactggatgcactgaatagtccggatgaagatggcaattcccataga
aaagtttatacatctgctgacttcattgaagggatctacagaacagaaagagataaaggc
acactttatgaattaactttcaaaggagagaaaagccaggaatttaaacgtcttgttctg
ttccgtccatttggaccaatcatgaaagtgaaaaatgaaagactcaacatggccaaagtc
attatgaatattattgtgcctctggcaaaaagagcagacaaatttcagcagttcatgcag
aatttcagagaagtgtgcattcgccaggatggaagaattcaccttactgtggtctacttt
ggaaaagaacaggcgcaagaagtacgatcaatacttgaaaatacctctaaagctgcaaac
ttcaaaaacttcacttttattcagttgaatgaggaattctctcgtgggaaaggcttagat
gttggagcacgtgcttggaaaggaagcaatgtccttctgtttttttgtgatgttgatatc
tacttcactgctgaatttcttaattcatgcagaataaatacacagccaggaaaaagagtt
ttttacccagttcttttcagtcagtataaccctgcaataatttatgggcatcatgatgca
attccatccatcgaccaacaactagttattaaaaaggacactgggttttggagagacttt
ggatttggaatgacttgtcaataccgttcagacttcataaacataggtggatttgattta
gatatcaaagggtggggaggagaggatgttcatctttaccgcaagtaccttcacagcaac
ctaattgtcatcaggacgacagtgagaggtcttgttcatctgtggcatgaaaagcgatgt
atggatgaacttactccagaacagtataagatgtgcatgcagtcaaaggctatgaacgag
gcttctcatggacagctaggaatgctggtcttcagacatgagatagaggctcacttacgg
aaacagcgagttggcataaagaaatcatga
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