KEGG   Xenopus laevis (African clawed frog): 108712258
Entry
108712258         CDS       T01010                                 
Name
(RefSeq) lysine-specific demethylase 5A isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xla01009]
    108712258
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xla03036]
    108712258
Enzymes [BR:xla01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     108712258
Protein phosphatases and associated proteins [BR:xla01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108712258
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108712258
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_5
Other DBs
NCBI-GeneID: 108712258
NCBI-ProteinID: XP_041443891
UniProt: A0A8J1MR27
LinkDB
Position
3S:complement(6252828..6304837)
AA seq 1693 aa
MAAYNEFVPPPECPVFEPSWEEFSDPLGFIGRIRPIAEKTGICKIRPPKDWQPPFACDVK
SFSFTPRIQRLNELEAMTRVKLDFLDQLGKFWELQGSALKIPVVDRKLLDVYALSKIVSS
EGGFELVTKEKKWSQVGNRMGYQPGKGTGSLLKIHYDRILYPYELFQSGVSLMGIKKTSL
KVEETVEVTEPCEVQKDSPETDKKIIAPMKRSRRIKSEPETIQITNSTEVKKLHVFGAAA
RMIGIGDSVKDRADEAYKKQNSSKLEAFGMQRRHQKGTLSVSFVDLYICLFCARGDCEDK
LLLCDGCDDSYHTFCLIPPLTEVPMGDWRCPKCVAEECNKPREAFGFEQAVREYNLQSFG
EMADSFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSRDFGSGFPILDG
RRKLTADEEDYAHSGWNLTNMPLLEQSVLTHINADISGMKVPWLYVGMCFSSFCWHIEDH
WSYSINYLHWGEPKTWYGVPSHAAEQLEDVMRTLAPELFETQPDLLHQLVTIMNPNILME
HGVPVYRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPMGRQCVSHYRRLRR
YCVFSHEELIFKMAADPECLDVGLAAAVCEEMTVMIEEETKLRHSIVQLGIVQAEEEVFE
LVPDDERQCSSCRTTCFLSALTCSCSLDRLVCLYHAEDLCSCPPQTKCLRYRYSLEDLPS
LLYGVKSRAQSYESWVNRVTESLSASLNHKKDVIELKVMLEDAEDRKFPENDLYRKLRDA
VKEAETCASVAQLLLTKKQKHNRLNPEYGKTRTKLTMEELKAFVHQLFSLPCIISQARQV
KNLLDDVEEFHERAHEAMRDDIPDSSKLQALIDLGSSLYVELPELPRLKQELLQARWLDE
VRQTLSDPHRVTLDVMKRLIDSGVGLAPHHAVEKAMADLQELLTVSERMEEKAKTCLQAR
PQHSMGGIESIIMEAKNIHAFLPNVLALKEALQRAKDWTSKVEAIQSGSHYAYLEQLENL
LVKGRPISVRLDSLPQVESQVAAARAWRERTARTFLKKNSSYTLLQVLSPRTDIGVYGSS
RSKRKKVKELMDEKDLELDSMSELEEPMEEPRNAASVVAVFKDMEHKEVDAMHSLRSANL
IKMTMVDRIEEVRFCVCRKAASGFMLQCELCKDWFHSTCVPLPKTSSQKKGSNWQSKDVK
FLCTQCMRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMSWQDQARQALATNEL
SCALAKLSVLSQRMVEQAAREKTEKIISAELQKAAANPDLQGHLPIFQQSSFSRGLSSSA
PSPQTPLVYDDEETDSDEDIRETYGYDVKDSGSIKSSSSLEPNLFCDEEIPIKSEEVVSH
MWTTSSFCAEHAYSSASKSCVQVSSTPRKKPRKSPLVPRSLEPPVLELSPGAKCQLEELM
MLGDLLEVSLDETQHIWRILQATHPPSEEKFLHVMEVHKGMQKDDSLDEKPVKLKNKDSS
EKKRKRKLERAEQLLGEGKQRSKELKKLDKNKKKKMKLGHDKAKELSKLAKRLAKEEERK
RKKEKAAAAKVELSKEIAEKKREKKVLDIPSKYDWSGAEDSDDENAVCAAQNCQRPCKDK
VDWVQCDGGCDEWFHQVCVGVSSEMAENEDYICTKCSRKRVQSSGPPCLPCPSNLTFFPG
FPMSPVEVKQEVS
NT seq 5082 nt   +upstreamnt  +downstreamnt
atggccgcctacaatgaatttgtgccccctccggaatgcccggtgtttgagcccagctgg
gaggaattctccgaccccttgggtttcattggacgcattcgaccgattgctgaaaaaaca
gggatatgcaaaatccgacctcccaaggactggcagccaccctttgcctgcgatgtgaaa
agcttcagcttcacccctcggatacagcgactcaacgaactcgaggcaatgacccgtgtg
aagcttgacttcctggatcagctgggaaaattttgggagctgcaagggtccgcacttaag
attccagtggtggatcgcaaacttttggatgtgtatgcacttagcaagatcgtttccagc
gagggaggctttgagcttgtaactaaagaaaagaaatggtctcaggtgggaaatcgaatg
ggataccagcctggaaaaggaacaggttctcttctgaagattcactatgaccgaatcctc
tacccctatgagctcttccagtctggtgtcagcctgatgggcatcaaaaaaacaagtctg
aaggtagaagagacggttgaagtgactgagccatgcgaggttcaaaaagactcgcctgag
actgacaagaaaataattgcccctatgaagcggtctcgacgtataaagtcagagccagaa
actatacagatcacaaacagcaccgaggtgaagaagttgcatgttttcggagcagcagcg
cgaatgattggaattggtgacagtgtgaaagaccgagctgatgaagcttacaagaagcag
aacagttcaaagctggaggcattcggaatgcagagaagacatcagaaggggaccctgtct
gttagttttgttgacttgtacatctgcctgttctgtgcccgtggtgactgtgaagacaaa
ttgctgctgtgtgatggatgcgatgacagctaccataccttttgcttgatcccacctctt
acagaggtacccatgggtgactggaggtgtcccaaatgtgtggctgaggagtgtaacaaa
ccccgtgaagcatttggatttgaacaggcagtgagggaatacaatttgcaaagcttcgga
gaaatggctgacagcttcaaatctgattacttcaatatgcctgtgcatatggttcctact
gagcttgtggaaaaggagttttggcgcttagtcagttccattgaagaagatgtgattgtg
gagtatggagccgacatctcctctcgggattttgggagcggcttcccaatattggatgga
aggagaaagctaactgcagacgaagaggattacgctcattctggatggaacctcactaac
atgcctctgcttgagcagtctgtgctcactcacataaacgctgatatctctggtatgaaa
gtgccctggctctatgttggcatgtgtttctcctcattctgttggcacattgaagaccac
tggagttactcaatcaactacctgcactggggggagccaaagacttggtatggtgttcct
tcacatgctgcagaacagctagaggatgtaatgaggactctggctccagagctttttgag
acacaaccggatctcttgcatcagcttgtaaccatcatgaaccccaacatcctgatggaa
catggagtgcctgtatacaggactaatcagtgtgccggagagtttgtgatcacctttcct
cgcgcttatcattctggattcaatcagggctacaactttgcagaggctgtaaatttctgc
actgcagactggcttccaatgggccgtcagtgtgtaagccactaccgcaggctgaggcgc
tattgtgttttctctcatgaagagctgatctttaagatggcagctgatccagagtgcctg
gatgtgggcctggcagccgcagtatgcgaagagatgaccgtaatgatagaagaggaaacc
aaactgaggcattcaattgtgcaattgggaatcgtacaggcagaggaggaggtctttgag
ttggtgccagacgatgaaaggcaatgttcttcatgcagaaccacatgctttctgtctgca
ctcacgtgttcctgcagcttggatcggcttgtatgtctgtatcatgcagaggatctctgc
tcttgtcccccacaaactaagtgtctcaggtaccgttattccctggaggatttgccatca
ttgctttatggtgtgaaatcacgggcacagtcttatgagtcctgggtgaatcgggttaca
gaatctctgtctgcctcactcaaccacaaaaaagacgtaatcgagctgaaagtcatgctc
gaggacgcagaagataggaagtttccagagaacgatctctaccgcaaactccgggatgct
gttaaggaggcagaaacctgtgcatcggttgcccagctgctactcaccaaaaaacaaaag
cacaacagattaaacccagaatatgggaagactcgcaccaaactcaccatggaggagctt
aaagcctttgttcatcagctgtttagcctgccctgtattatctctcaggcccgacaggtt
aagaatctgcttgatgatgtggaggagttccatgaacgtgctcatgaagccatgcgggat
gatatccctgactccagcaagctccaggcgctcattgacctcggctccagcttgtatgtg
gaacttccagaactgccgaggttaaagcaagagcttctgcaggcccgctggctcgacgag
gttcgacagactttgtcagaccctcacagggttactctggatgtgatgaagagactgatc
gactctggagtaggtctagccccacatcatgcagtggagaaagcaatggcagacttgcag
gaactgctcacagtatcagagaggatggaagagaaagccaaaacatgtctgcaagccagg
ccacagcacagcatgggaggtattgagagcatcattatggaagccaagaacatccacgct
tttttacccaatgtgcttgctcttaaggaagccctacaaagggccaaagattggacatcc
aaagtggaggccattcagagtggctctcactacgcgtacttggagcagttagagaacctg
cttgtgaaaggccgccccatttctgtgcgcctcgattccctccctcaggtggagtcccag
gttgcagcagctcgagcatggagagagagaacagccaggacattcttaaagaaaaactcc
agctatacactgctacaggtgttgagtccacggaccgacattggtgtgtacggcagcagt
cggagcaagaggaagaaagtcaaagagttaatggacgagaaagatttggaactggattcc
atgagtgaacttgaagaaccaatggaagagccccggaatgctgcatctgttgttgccgtg
tttaaagacatggagcacaaagaggtggacgccatgcattctctgagatcggctaatcta
atcaagatgacgatggtcgatcgtatcgaggaggtgcgcttctgtgtgtgccggaaggca
gccagtggcttcatgctgcagtgcgagctttgcaaagactggttccacagcacttgtgtt
ccactgcctaaaacgagctcacagaaaaagggctccaactggcagtccaaggacgtgaaa
ttcctttgcactcagtgtatgcgctcccggcggccgcgcctagagaccatcctctccctg
ctcgtttccctgcagaaactacctgtgcggttacctgaaggagaggccttgcagtgcctg
accgaacgagccatgagctggcaggaccaggcacggcaggcgttggccacaaacgaacta
tcatgcgctcttgctaagctttctgttctgagccagcgtatggtggagcaggcagcgcgt
gagaagacggagaagatcatcagtgcggagctgcaaaaagctgcagcaaacccagacctg
caaggtcacttgccaatattccagcagagctcctttagccggggcctgtccagctcagca
ccgtctccccagacgcctttggtttacgacgacgaggagactgattcagatgaggatata
cgggagacgtacggttatgatgtaaaggacagtggaagcatcaaatcttcaagcagcctg
gaaccaaacctgttctgtgatgaggagatccccattaagtctgaagaagtggtgagccac
atgtggacaacgtcatcgttttgtgctgaacatgcttactcctcggcttccaagagctgt
gtccaagtttcaagcaccccacggaagaaacccagaaaaagcccactggtgccgcgaagc
ctagagcctcctgtacttgagctgtccccaggtgccaagtgccagttggaggaacttatg
atgttgggagatctgctggaggtatcactggatgagactcagcatatctggaggatcctt
caggcaacacacccaccctctgaagaaaagttcctgcatgtcatggaggtacataaaggg
atgcaaaaggatgatagcctggatgagaaaccagtgaagctaaaaaacaaggactcttca
gaaaaaaaacgcaagagaaagttagagcgtgcagaacaactcctgggtgagggcaaacag
aggtccaaggaactgaaaaaactagataagaataaaaagaaaaagatgaaattggggcac
gacaaggccaaggagctgagcaagttggccaaaagactggccaaggaggaagaacgtaag
cggaagaaggagaaagcggcagctgccaaggttgagctcagcaaagaaattgctgagaag
aagcgagagaagaaagtgctggatattccatctaagtatgactggtcaggagctgaagat
tcagatgatgagaatgcagtatgtgctgcacagaactgccagcgaccgtgcaaagataag
gttgattgggtgcagtgtgatgggggctgcgacgaatggtttcatcaggtctgcgtgggt
gtctcctctgaaatggctgagaatgaagactacatctgtacgaaatgcagccggaagcgg
gtgcagagttcaggccccccgtgtctaccctgcccttcaaatttgactttcttccctggt
ttccctatgtctcccgttgaggttaaacaggaagtcagctag

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