Xenopus laevis (African clawed frog): 108712273
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Entry
108712273 CDS
T01010
Symbol
gabra1.S
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04080
Neuroactive ligand-receptor interaction
xla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108712273 (gabra1.S)
04082 Neuroactive ligand signaling
108712273 (gabra1.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108712273 (gabra1.S)
Ion channels [BR:
xla04040
]
Ligand-gated channels
GABA-A
108712273 (gabra1.S)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
108712273
NCBI-ProteinID:
XP_041443978
Xenbase:
XB-GENE-17334257
UniProt:
A0A8J1MRH2
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Position
3S:17853867..17963938
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AA seq
454 aa
AA seq
DB search
MKRKFKFIDCLWACTIVLNLLSEIRCGQSKQDEIRDNTTIFTRILDRLLDGYDNRLRPGL
GERVTEVNTDIFVTSFGPVSDHDMEYTIDVFFRQGWRDERLKFKGPMTVLRLNNLMASKI
WTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACP
LKFGSYAYTRAEVVYSWTREPAQSVVVAEDGSRLNQYDLLGQTVASGIVQSSTGEYIVMT
THFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISAR
NSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPQKPKKVKDPL
IKKNNTYASATANYPPTIPRDPGLATIAKSATIEPKDIEPKPKPAETKKTFNSVSKIDRL
SRIAFPLLFGIFNLVYWATYLNREPAIKPSNPPK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaaattcaagttcatagattgtctctgggcctgcaccattgtgttaaaccta
ttaagtgaaataagatgtggacaaagcaaacaagatgagattagagacaatacaactata
ttcacaagaattctggaccgtcttcttgatggctatgataaccgcctaagaccaggactg
ggagagcgtgtaactgaagtgaacacggatatctttgtcaccagctttggacccgtttct
gatcatgatatggaatacacaatcgatgtattttttcgtcaaggatggagggatgaaaga
ttgaaattcaagggtcccatgactgttctccgcctgaacaacttaatggccagtaaaata
tggacaccagatactttttttcacaatggaaaaaaatctgtggcgcacaacatgaccatg
ccaaacaaactgctccggataacagaggatgggactcttttgtatacaatgcgactaact
gtacgagcagaatgccccatgcatttagaagattttccaatggatgcacatgcttgcccc
ttgaaatttggaagctatgcctatacaagagcagaagtggtgtattcttggaccagggaa
ccagctcagtctgttgttgtagctgaagatggctctcgtttgaatcagtatgaccttctt
ggtcaaacagtggcatctggaattgtccagtcaagtacaggtgaatatattgttatgaca
actcacttccacttgaaaaggaagattggttattttgtcattcagacctacttaccatgt
atcatgaccgtcattttatctcaggtttctttctggctcaatagagagtctgttcctgca
aggactgtatttggtgttacaactgtccttaccatgacaacgctgagtattagtgcccga
aattcactaccaaaagtagcatatgccactgccatggactggtttattgcagtatgttat
gcttttgtcttctctgccctgatcgagtttgcaactgtgaattactttacaaaaagagga
tacgcatgggatggaaaaagtgttgttccacaaaagccaaaaaaggtaaaggaccctctt
attaagaaaaacaacacatatgcttctgcaactgcaaactatcctcctactatacctcgg
gatcctggtctggcaaccatcgccaaaagtgcaaccatagaaccgaaagatattgagcca
aaaccaaagccagcagaaacaaagaaaactttcaacagcgttagcaaaattgaccggcta
tcaagaatagcatttcctcttctttttggaatctttaacttagtttactgggcaacatac
ctaaaccgggagccagcaattaaaccttcaaatccacctaaataa
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