Xenopus laevis (African clawed frog): 108712385
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Entry
108712385 CDS
T01010
Symbol
mybpc1.S
Name
(RefSeq) myosin-binding protein C, slow-type isoform X1
KO
K12557
myosin-binding protein C, slow-type
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108712385 (mybpc1.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
108712385 (mybpc1.S)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108712385 (mybpc1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
Myb_DNA-bind_5
THB
V-set
Myb_DNA-bind_4
C2-set_2
Myb_DNA-binding
MADF_DNA_bdg
Pur_ac_phosph_N
fn3_2
DUF6081
SNX17-31_F2_FERM
Motif
Other DBs
NCBI-GeneID:
108712385
NCBI-ProteinID:
XP_041444601
Xenbase:
XB-GENE-6486841
UniProt:
A0A1L8GUX9
LinkDB
All DBs
Position
3S:complement(98183751..98249346)
Genome browser
AA seq
1505 aa
AA seq
DB search
MPEPTTGTGSTVTEKQKTVQVAGGSRTEITTQTVKTQIKWQKDGKEVKSEKTVTQTEQTK
RTVIVDNNVTQEEFSVSGSIKEEGKAADQNTVKAPPPVEEQNKPKEDGPKKAKDEDDSSS
GNTPPPGENAQSKERKGSVWSLGEGQPEDAEKRDNSQRSTLFIEKPSSGSVSVGGDIKFI
AKMEAKDLLRKPVVKWLKGKWMDLASKAGKHLQLKDTFDRINKIYTFEMQIIKAKENYAG
NYRCEVTYKDKFDSCSFDLEVIATQDASQNIDIRSAFKRSGEGQDDAGELDFSGLLKRRE
VKPEEGPEIDVWEILKSASPNEYEKIAFQYGITDLRGMLKRLKRMRREEKKSEAFSKKLD
PAYQIDKGGRVRFVVEVADPTVELKWYKNGQEIRPSTKYIFEHKGNQRILFINNCTLADD
AAYQVCAGDEKCSTELFVREPPVLVTKELENVHSYCGDRVEMECEVSDEDANVKWFKNGV
EITNEPRSRYRLKVDGKKHTLIIDEANRGDSATYSVMTTGGQSAAQLQVDLRPLKILQPL
TDMTVNLGKEINLKCEISENVPGRWYRNGQLVHGSDRIKIFHKGRIHRLVIESGLVEDEG
DYSFVPDLYLTNIPANVHVIDPPKIHFDALSYPDNTVIVVAGTKLRLEVPVTGEPAPKII
WSRGDKWITELSGRIHAESYPDHGLLVIDSAEREDSGTYRIMVKNEAGEAVAHIKIKVVD
IPDPPQAPDVTEVGEDWCTMKWDPPLYDGGCPILGYFIERKKKQSSRWMRLNFDLSKETM
FEPKKMIEGVAYEVRVFAVNSIGTSKPSPPSKAFVPLAVTSAPTMLTVDGVTDTSVTMKW
RPPDHIGAAGLDGYIIEYCFEGGEDEKQKKPEFSENEMEILVDGVSKHGQQLCGGLAAKT
TKAEKSKIWADIQAKLNAVGEQNRSIADIKKQWNNLKKQTKNKLSQIKQKGTEVSEGVPA
PPNQELNSLEKRVEAMLQLEQMEGTPGLDDDLQDDVTGGGADKPIFTDEEMNVLVDNIDK
LGPQLFGPPTAQTTAADKDKMWADIQKHINAVGGNNRSVEDIKKAWNKLKKQTKKKIEHN
KTQALVESKGQPSQYHELTPIEKRVEVILQIKEIDEEDFQGEPEEAEEWVVANPDPTDKT
RFTITGLPTGSKIFVRVKSINAAGPSDPKVHPQPILVKEVIVPPKIRLPRHLKQTYIRKV
GEAVNLVIPFQGKPRPKVSWKKNGSHVDKTQISIRNSECDTILFIRKAEMSHSGKYDLKV
KVENLQDKASIFIQIVDRPGPPQEVLIDEVWGENVALEWKPPLDNGNATITGYTIQKADK
KTMEWFTVLEHYHRNSATISELVIGNEYYFRIFSENMCGLSEAATRTVNSALIEKEGKAY
KRPDYDDFDFTEPPQFTHPLINTVAIAGYNATLNCSVRGNPKPKITWMKNKVVIMNDPRY
RTFSNQSVCTLEIRKPSPYDGGTYTCKAVNELGEAEVDCKLEVKGSLSGEPFGLWKQKQL
HNKDY
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgccggagccaacaacaggtacaggatctactgtgaccgaaaaacaaaagacggttcaa
gtagccgggggaagcagaactgagataaccacacagacagtcaagacacaaatcaaatgg
caaaaggatggaaaggaagtgaaaagtgaaaaaactgttacgcagacagagcaaacaaag
cgtacagtcattgttgataataatgtaacccaggaagaattttcagtgagtggcagcatc
aaagaagagggcaaagcagcagaccaaaatacagtaaaagcaccaccacccgtggaagag
caaaacaagcccaaggaagatgggccaaagaaggcaaaagatgaagatgattcctcttca
ggtaacacacctcctccaggtgagaatgctcagtcaaaggaaaggaaaggttctgtatgg
tcccttggagaaggacaaccagaagatgcagagaaacgtgataattcacaaagatcaaca
ttatttattgagaaaccttcaagtgggtctgtaagtgtgggtggtgatatcaagtttatt
gcaaaaatggaagctaaagatctccttcgcaaacctgtagttaaatggttgaaaggcaaa
tggatggacttggctagtaaagctggcaagcatctgcagctgaaggatacctttgaccgt
attaataaaatttacacttttgaaatgcaaataataaaagctaaagaaaactatgctggc
aactacagatgtgaagttacatataaggataaatttgatagctgctcctttgacctagag
gttatagctacccaagatgcttctcagaatattgacatccgatccgcatttaagagaagt
ggtgaaggacaagatgatgcaggagaacttgactttagtggtctcctgaaacgtagggag
gtcaagccagaagagggccctgaaatcgatgtgtgggagatccttaagagtgcaagtcct
aatgaatatgagaagatagcgtttcagtatggcatcactgatctcagaggaatgcttaaa
cgactgaaacgcatgcgcagagaggaaaagaaaagtgaagcattttccaaaaaactggat
ccagcttatcagattgataaaggaggacgtgtgaggtttgttgtggaagtcgctgaccca
acagtagaactgaagtggtataaaaatggacaagaaatccgtccaagcactaaatacata
tttgaacacaaaggaaatcagaggatactgttcattaataactgtacattagctgatgac
gctgcctatcaagtgtgtgcaggagatgaaaagtgctcaacggaactgtttgtaagagag
cctcctgtattggttacaaaggaactggagaatgttcattcctactgcggagatagagtg
gagatggagtgtgaggtctctgatgaagatgctaatgtgaaatggtttaagaatggagtg
gaaatcacaaatgagccacggtcaagatatagacttaaagtagatggcaaaaagcataca
ctgattattgatgaagcaaatcggggagattcggctacttactctgtgatgacaactgga
gggcagtcggcggctcagcttcaggttgatttacggccactgaagatattacagcccctg
actgacatgacagtgaatcttggcaaagaaatcaacctgaaatgtgaaatctcagagaat
gtaccagggagatggtacagaaatggacaactagtacatggtagtgatcggataaagatt
ttccataaaggaaggattcacagattggtcatagaaagtggtttagttgaagatgaaggc
gattactcatttgttcctgatctttatttaaccaatattcctgccaatgtccatgtgatc
gatcctcccaaaatccactttgatgccctttcttatcctgataacaccgtgatagttgta
gcagggacaaaacttcgacttgaggtccctgttactggagagccagctccaaaaattatc
tggagtagaggggataagtggatcacagagctaagtggtcgtatccatgcagaatcatat
cctgatcatggacttctggtcattgactcagctgagagggaagactctggtacttaccgc
atcatggttaagaacgaagcaggagaagcagtagctcacatcaaaattaaggttgtagat
attccggatccccctcaggctcctgatgttacagaagttggggaagattggtgtactatg
aaatgggatcccccattatatgatggtggctgtcctattttggggtattttattgaaaga
aagaagaaacaaagctctaggtggatgcggttaaactttgacctcagcaaggaaaccatg
tttgagcctaagaaaatgattgaaggtgtggcatatgaagtccgggtatttgcagttaac
tcaattggcacttctaaacccagtcctccttctaaagcatttgtaccattggctgtaaca
agtgcgcctactatgttaactgtagatggagtgactgacacgtcagtcacaatgaaatgg
aggccaccagatcacatcggggctgcaggtttagatggttatatcattgaatattgcttt
gaaggaggagaagatgaaaagcagaagaagccagaattttctgaaaatgagatggaaata
ttagttgatggtgtctccaaacatggccaacaactttgtggtggcttggctgctaaaacc
accaaagcagagaaaagtaagatctgggcagatatccaagcgaaactcaatgctgtgggg
gaacagaacagatccattgctgacattaaaaaacaatggaataatctcaaaaagcaaact
aaaaataagttatcacaaatcaagcagaaaggcacagaggtgagtgaaggagtgcctgct
ccaccaaatcaggagctaaattccttggaaaaacgtgttgaagccatgttgcaactggag
caaatggaaggcactcctggattggatgatgacctacaagatgatgtaactggaggagga
gcagacaaaccaatctttacggatgaagagatgaacgttttagtggataatattgacaaa
cttgggcctcagctatttggacctcctactgcccaaaccactgctgcagataaagacaaa
atgtgggcagacatccaaaagcatataaatgctgtggggggcaataacaggtctgttgaa
gacattaagaaagcttggaataagctcaaaaagcaaacaaagaaaaagatagagcacaac
aaaactcaagccttagtggaaagtaaaggacaaccctcacaatatcatgaactaacacct
attgagaagcgtgtggaggttatattacaaatcaaagaaattgatgaagaggattttcaa
ggggaaccggaggaagccgaagagtgggtagtggctaatcccgacccaacagataaaaca
agattcacaatcacagggttaccaactggatctaaaatttttgtgagagtgaaatcaata
aatgctgcaggcccgagtgatccaaaagtccacccccaaccaattcttgtcaaggaggta
attgtgcctccaaagatacgtctaccccgtcacttaaaacagacatatatccgaaaagta
ggagaagctgtaaaccttgttataccgttccagggaaaacctagaccaaaggtatcatgg
aaaaagaatgggtcgcatgtggataaaacgcaaatcagtattcgtaacagtgaatgtgac
acaatactttttattcggaaagcagaaatgagccattctggaaaatatgacttgaaagta
aaagttgagaacctccaagataaggcatcgatcttcattcagattgttgatcgtcctggg
cctccacaagaagtactcattgatgaggtttggggtgaaaatgttgcactggaatggaag
cccccattagataatggtaatgccactattactggatacaccatacagaaggcagacaag
aagacaatggaatggttcacggtcttggaacactatcacagaaacagtgccacaatatca
gaacttgtgataggaaacgagtactatttcaggattttctcggaaaatatgtgtggcctc
agtgaggcagctaccaggactgtaaatagtgcacttattgagaaggaaggtaaagcttac
aagagaccagattatgatgactttgattttactgaaccgccacagtttacccatccccta
ataaatacagtagctattgctggatacaatgctaccctcaactgcagtgtcagagggaac
ccaaagccaaaaataacatggatgaaaaacaaagtggttatcatgaatgatcccagatac
agaacgtttagtaaccagagcgtgtgcaccctggagatacgcaaacctagcccctatgat
gggggtacatatacctgcaaagctgtaaatgaactgggtgaggctgaggttgattgcaag
ctggaggttaaagggtcattaagtggagaaccatttggactctggaaacagaagcagttg
cacaataaggactattga
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