Xenopus laevis (African clawed frog): 108712555
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Entry
108712555 CDS
T01010
Symbol
prdm4.S
Name
(RefSeq) PR domain zinc finger protein 4
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108712555 (prdm4.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
108712555 (prdm4.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
Zn_ribbon_PRDM4
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
C2CH-3rd_BIRD-IDD
zf-C2H2_16
zf-C2H2_jaz
zf-met
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
108712555
NCBI-ProteinID:
XP_018110282
Xenbase:
XB-GENE-17335139
UniProt:
A0A974D5X7
A0A1L8GQR7
LinkDB
All DBs
Position
3S:4466992..4479858
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AA seq
762 aa
AA seq
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MHYRMNELNLSTVGMEQLTPSSVTNSLPLSGSHLGLSASPPHNTLPAPGLPVAIPNLGPS
LSSLPSALSVMLPMGIGDRGVMCGLPERNYPLPPPPYPHLDSSYFRHILPGILSYLADRP
PPQYIHPCSLNVDGSSTAPQPLDPFQPGGSVGLETGIVSLDSRSVGGHTAQSLHPSDGHE
LDTGITMGSVSRVNSPIPSDSITEELSMEGVPTEHGQISNVARSHEPLTVDGSLPPDAVG
HAVVLPLHSGSLELPVVMESEHHMATGSSMSESSLSDTIHTVAMNSNPQLSSLTSVSLHG
ASITLEPVTPEVSMGGGHVDTGSLTFVPSTLHIDSNSNKENMATLFTIWCTLCDRAYPSD
CPEHGPVTFIPDSPIESRARLSLPKELVLRQSVTGAEMGVWAQESIPVRTCFGPLIGQES
QSLEVADWTDKSASHIWKMYHNGVMEFCIITTDENECNWMMFVRKARNPEEQNLVAYPHD
GKIYFCTSNEVSPEQELLFYYSRDYARQMGLPEQPEFFVCHCGKECHSYADFKSHLNSHL
TAESLSSGANGLMPTNRKWKCSMCSRSFTSSSKLNVHFMGHMGMKPHKCEFCNKAFSDPS
NLRTHLRIHTGQKNHRCGLCNKSFTQKAHVASHMAIHTGEKTLKCDFCEKMFMRRHDLKQ
HRLTHTRERHIKCPKCEKCFSRTGHLKKHIDSHEGRRDYVCEKCSKAFLTRYHLTRHLKI
CKGPSTAPLTPDTDEEEDLEDEELLSSDCAAFDTDGQLTVHT
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgcattacagaatgaatgagttgaacctcagcaccgtggggatggagcagctgactcct
tcctctgtgaccaattctctcccgctctcggggagtcatcttggactttctgcctccccc
ccgcacaatactcttccagcgccgggcctaccagtggcaatccctaacctgggtccatcc
ttaagctccctcccttctgcgctctcagtgatgcttcccatgggtataggagaccgaggt
gtgatgtgtggtctcccagagagaaactatccccttcctcctccaccttaccctcacctg
gacagcagctacttcaggcatatactgccaggaatcctctcgtatctagctgaccgcccc
ccaccgcagtacatacatccctgctcgctcaatgtagacggcagctccaccgcccctcag
cctctggacccttttcagcctgggggatctgtgggcttagagactggaattgtatcccta
gactctcgctcagttggtgggcacacagcacagagcctgcaccccagcgatggccatgag
ctagacactgggattactatgggtagtgtctccagagttaacagccccatcccatcggac
agcattacagaagagctaagcatggaaggagtcccaacagaacatgggcagatctcgaac
gttgctcgatctcatgagcccctcacagtggatggcagtttgccccctgatgccgtgggc
catgctgttgtgttaccgctgcacagcggatccttagagctcccagtagtaatggagtcg
gaacatcacatggcaactggttcaagcatgtcagaaagcagcctaagtgatactatccat
actgtggccatgaacagtaacccccagctttcatctttaacttccgtgtctctgcatggg
gccagcatcacccttgagccagtcaccccagaggtctccatgggagggggtcacgttgat
accgggagcctgacttttgtcccttccaccctacacatcgactccaattccaacaaagaa
aacatggcaactctgtttacaatttggtgtacgctgtgtgacagggcttacccttctgat
tgtcctgaacacggtccggtcacatttatacccgacagtcccattgagagtcgggcgaga
ttgtctctccctaaggagctggtgctgagacagtctgtaacaggagccgaaatgggtgta
tgggcacaggaaagcatcccagtcaggacctgctttgggcccttaataggacaggagagt
cagtctctggaggttgctgattggacagacaagtcagccagtcatatctggaagatgtac
cacaacggagtgatggagttctgcatcatcacgactgacgagaatgaatgtaattggatg
atgtttgtgcgcaaggccaggaatcccgaggaacagaatcttgtggcctaccctcacgat
gggaagatctacttctgcacctcgaatgaggtctcaccagaacaggagctgctcttttat
tacagtcgggactacgccaggcagatgggcctccctgaacagccggagtttttcgtgtgc
cactgtgggaaggagtgccattcgtatgcagatttcaagagccacctaaatagccaccta
actgccgagtctctgagcagcggagccaacgggctgatgcccaccaaccgcaagtggaaa
tgctcaatgtgctctcgctccttcacctcctcctccaaactcaacgttcatttcatgggt
cacatgggcatgaaaccccataagtgcgagttctgcaacaaggcattcagcgaccccagc
aaccttcgcacccacctccggatacacacgggtcagaagaatcatcgctgcggcctgtgc
aacaagtcattcacccagaaagctcacgtggcctcccacatggccatacacacgggcgag
aagaccctgaaatgcgacttctgcgagaagatgttcatgcgaaggcacgacctaaagcag
cacaggctcacccacacccgggaacggcatatcaaatgccccaagtgtgaaaaatgcttc
tcccgcacaggtcaccttaagaagcacatcgattcgcacgaagggaggcgggactatgtg
tgcgagaaatgctccaaggctttcctcaccaggtaccacctcaccaggcacctgaagatc
tgcaagggtccaagcaccgccccccttacgcccgatactgatgaggaagaggatttggag
gatgaagagttactgagctcggactgtgcagcgtttgatacggacgggcaactgactgtg
cacacgtga
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