Xenopus laevis (African clawed frog): 108712563
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Entry
108712563 CDS
T01010
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04150
mTOR signaling pathway
xla04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108712563
04150 mTOR signaling pathway
108712563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108712563
Membrane trafficking [BR:
xla04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
108712563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
SGL
EGF_LRP2
EGF
cEGF
Podoplanin
Motif
Other DBs
NCBI-GeneID:
108712563
NCBI-ProteinID:
XP_041443840
UniProt:
A0A8J1MS47
LinkDB
All DBs
Position
3S:complement(4876143..4944872)
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AA seq
1613 aa
AA seq
DB search
MGALLRSLLMCSLSCLLRASPLLLYANRRDLRLVDTAGMKGNSTVVVSGLEDAAAVDFVF
SRGLIYWSDVSEEAIKRIDFNKTGSSQDVVIGGLVSPDGLACDWLGEKLYWTDSETNRIE
VSNLDGSLRKVIFWQELDQPRAIALDPTRGYMYWTDWGEVPKIERAGMDGSVRSVIVDSD
IYWPNGLTLDYDEQKLYWADAKLSFIHKANMDGSHRQTVIKGSLAHPFALTLFGDTIYWT
DWTTRSILACNKYTGEDRREVDTDIFSPMDIHVFSHLRQPNATNPCAAHNGGCSHLCLMS
PMEPFYQCACPTGVRLMEDGKMCMHGATELLLLVRRTDLRRISLDTPDFTDIVLPLDDIR
HAIAVDYDPVDGYIYWTDDEVRAIRRTQIDGSSSQYIVTSQVAHPDGIAVDWVARNLYWT
DTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPMNGYMYWTDWGEIPKIERAAMDGSD
RIILVNTSLGWPNGLALDYAEGKIYWGDAKTDKIEVMTTDGTGRRILVEDKLPHIFGFTL
LGDYVYWTDWQRRSIERVHKRTGEREVIIDQLPDLMGLKATNIQKISGTNGCAENNGGCS
HLCLYRPQGPRCACPIGLELINDMKTCIVPEAFLLFSRRADIRRISLETSNSHVAIPLTG
VKEASALDFDVTDNRIYWTDVSLKTISRAFMNGSALEHVVQFGLDYPEGMAVDWLGKNLY
WADTGTNRIEVSKLDGQHRQILVWKDLDSPRALALDPAEGYMYWTEWGGKPKIDRTAMDG
SGRITLVPDVGRANGLTIDYAERRLYWTDLDTNLIESSNMLGLDRVVIADDLPHPFGLTQ
YQDYIYWTDWSRRSIERANKTSGQNRTMIQNDLDYVMDILVFHSSRQAGWNECASSNGHC
SHLCLATPVTGYTCGCPVHHSLNADNKTCDAPSSFLLFSQKNAINRMVIDEQQSPDIILP
IHNLRNVRAIDYDPVEKHLYWIDSRQNIRRAQEDGSQSMTIVSSTIPNQNMDMQPYDLSI
DVYSRLIYWTCEATNVINVTRLDGRAIGVVLKGEQERPRAILVNPERGYMYFTNLQDRSP
KIERAALDGTEREVLFFTGLSKPVALALDNKMGKLFWADSDLRRIESSDLSGGHRIVLED
SNVLQPVGLTVFGNHLYWIDRQQQMIERIEKTGRVGRTKIQARIPLLTDIHAVTELSMDE
YKEHPCSQDNGGCSHICIVKGDGTTRCSCPMHLVLLQEDELSCGEPPTCSPLQFTCFTGD
IDCIPGEWRCDGFTECEDHSDEQNCPMCSDSQYQCASGQCIDSSLRCNGEANCQDKSDEK
NCNEVCAPDQFHCGSGQCIGKHRRCDLSPDCSDSSDEQACYPTEEPPPPSTNTIGSIIGV
ILTVFVVGGVYFICQRVLCRRMKGDGETMTNDYVVHGPVSVPLAYVPHPSSLTGSLPGMS
RGKSVIGSLSIMAGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATERSHYTM
EFGYSSNSPSTHRSYSYRPYNYRHFAPPTTPCSTDVCDSDYTPSHRLTSAAAAKGYISDL
NYDSEPVPPPPTPRSQYLSAEENYESCPPSPYTERSYSHHLYPPPPSPCTDSS
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgggggccctgctgaggagcctgttgatgtgcagcctgagctgcttgttgagggcatct
ccgttactgctatatgccaatcgccgtgacctgcgactggtggacactgcgggaatgaag
gggaactccactgttgtggtcagcggcttggaagacgcagccgccgttgatttcgtattc
tcccgcggcctgatctactggagcgacgtgagcgaagaagcaatcaaaaggattgatttt
aacaaaactggtagctcgcaggacgttgtaataggtggcttggtttcgccagatggactg
gcttgcgattggctgggagaaaaactttactggactgactcggaaacaaatcggattgag
gtttctaatctggacgggtcattgcggaaagtaatattttggcaggagctggatcagcct
cgagcaattgcacttgatcctaccagagggtatatgtactggacagactggggagaggtg
ccaaagattgagcgagctggaatggacggttctgtgcgttctgtcatcgtagattctgac
atttactggccgaacgggctgacgctggattatgatgaacagaaactatactgggccgac
gcaaagctgagctttatccacaaggccaacatggacggttcacatcggcaaacggttatt
aaaggttcccttgctcatccctttgccttgactctatttggggacacgatctactggaca
gactggaccacacgctcaatcctagcctgtaacaagtacactggagaggaccggcgagag
gtggacacagacattttctcccccatggacatccatgtttttagccatctgagacagcca
aacgctaccaatccctgcgcagcccacaacgggggttgttctcatttatgcctgatgtct
cccatggagccattttatcagtgcgcttgtccaacaggtgtgcgtctcatggaggatggg
aagatgtgcatgcacggtgctacagagttgctgctgcttgtccgcaggacggaccttagg
cggatatcgctggatacgccggactttaccgacattgttttgccgctggacgatatccgc
catgctattgctgtagactatgatcctgtcgatggttacatttactggaccgatgatgag
gtgcgagccatacggcgcacgcagatcgatggctcttccagtcaatacattgtcacctcc
caagtggcccacccggatggtatcgctgtcgattgggtggctcggaacttgtactggact
gacacagggacagaccgcatagaggtcactcggctcaatgggaccatgcgcaagattctc
atatcggaggacctggacgaaccgagagccatagtcttagatcctatgaatgggtacatg
tattggactgactggggagaaatccctaaaatagagcgtgctgcaatggatggttcagat
aggattatattagtaaacacctctcttggctggcctaatggactggccctggattatgca
gaagggaaaatctactggggagatgccaagaccgataagatagaggttatgacaacagat
ggcacaggcaggcggattctggtggaagacaaactgccccatatctttggcttcacactt
ttgggtgactacgtgtattggactgactggcagagacgcagcattgaaagggttcacaaa
cgtacaggagagcgtgaggttattatcgaccagctacctgatctcatgggtctgaaagcc
accaacatacagaaaatatctggtacaaatggctgtgctgagaacaatggtggctgcagt
cacctttgcctgtaccgaccgcagggacctcgctgtgcctgtcccattggcttggaactg
ataaatgacatgaagacctgcattgtcccagaagctttcctcctcttctcccgcagggct
gacatccgccgcatctccctggagactagtaatagccatgtggccatacccctgactgga
gtaaaagaagcctctgctctcgattttgatgtcacggacaatagaatctattggacagat
gtcagtctaaagaccatcagtagagcgttcatgaatggcagtgctctagaacacgtggtg
cagttcggccttgactacccagagggaatggcagtggactggttagggaaaaacttatac
tgggcagatactggtactaaccgaattgaagtatcaaagttggacgggcagcaccgacag
atcctagtatggaaagaccttgacagccccagggccctggctttggacccagccgaaggg
tatatgtactggactgaatggggtggaaaacccaagatagacaggactgctatggatgga
agtgggcgcatcactctggtgccggatgtaggacgagccaatgggctcacaattgactat
gcagagaggcggctttactggacagatctggatactaatctcattgaatcatcaaatatg
cttggattggatcgtgtagtgattgccgacgacttgccccatccctttgggttaacccag
taccaggactatatctactggacagactggagccgacggagcattgagagagccaacaag
accagtgggcagaatcgaaccatgatccaaaatgacctggactacgttatggacattcta
gtatttcactcctcccggcaggctggttggaatgagtgtgcctccagcaatggccactgc
tctcacctctgcttggccactcctgttactggctatacctgtggctgccctgtacaccac
tccttgaatgcagacaacaaaacctgcgatgctcccagttccttcctcctcttcagtcag
aaaaatgccataaaccgcatggtgatcgatgagcagcagagtcccgatatcatcctgccc
attcacaacctacgcaatgtccgagccatcgactatgaccccgtggagaagcacctctac
tggattgactcacggcagaatatacgccgggctcaggaggatggcagccagagcatgacc
atagtttcaagcaccatccccaaccagaatatggacatgcagccgtacgatttgagtatt
gatgtctatagtcgcttgatttactggacctgcgaagcaaccaacgtcataaacgtcaca
cggctggatggaagagccatcggggtggttctaaagggagaacaggaacgtcccagagct
attcttgtgaatccagagagagggtacatgtattttaccaacctccaggacagatcacca
aaaatcgaaagagctgctctcgatggaacagagcgagaggtgctgttttttaccggcttg
agcaaaccagttgcccttgcgcttgacaacaaaatggggaagcttttctgggcagactcc
gacctgaggaggatcgaaagcagtgacctatcaggtggccatcgcatagttcttgaagat
tctaatgtcctacaaccagtcggactcacggtcttcggcaatcatctgtattggattgac
cggcaacagcaaatgattgagcgaattgagaaaaccggtcgtgtgggccgcaccaagatc
caagctcgtatcccactgctaaccgatatccatgctgtgactgaactgagcatggatgaa
tacaaggaacacccttgttcccaggataatgggggctgctcccacatctgcatagtgaaa
ggagatgggaccacccgctgttcctgcccgatgcaccttgtccttctccaggaggatgag
ctgtcatgtggggagcctcccacctgctcccccttacagtttacctgtttcaccggtgac
attgattgcatcccgggtgagtggcgctgcgatggttttacagagtgtgaggaccacagt
gacgagcagaactgccccatgtgctcagactcacagtaccaatgtgccagtggccagtgc
attgactcctccctacgctgtaacggagaggccaactgtcaggacaagtctgatgagaag
aactgcaatgaagtctgtgcacctgaccagtttcattgcggcagtggacagtgcattggg
aagcacaggcgttgcgatctcagcccggactgcagtgacagctcagatgagcaagcttgc
tatcccacagaggaaccgcctcctccgtcgaccaacaccatcggctccatcattggcgtg
atcctcaccgtatttgtggtagggggagtgtatttcatctgtcagcgagtgttgtgtcgt
cgcatgaaaggagatggagagaccatgaccaatgactacgtagtgcacggccccgtgtct
gtccccttagcttacgtcccgcacccgagctccctaaccggatccttgccaggtatgtca
cgtgggaaatctgtcatcggctctctcagcattatggctggaagcagtgggccaccgtat
gaccgggctcatgtaactggagcgtcgtccagcagctcctccagcaccaaaggaacttat
tttccaccgatcttaaacccacctccctccccagccaccgagcgttcccattacacaatg
gaatttggttactcatcaaacagtccttccacccacaggtcgtacagttacagaccgtac
aactaccggcattttgcccctcctacaactccctgcagcacggatgtgtgtgacagtgat
tacacgcccagccaccgattaacctccgcagcagcagcgaagggatacatcagcgatctc
aattacgattcagaaccagtccctccgcctccaactccccgtagccagtacctttcagca
gaggagaactacgaaagctgcccgccctctccctacacggaacgaagctactcccatcac
ctttaccccccgcctccatctccttgtacagactcttcctga
DBGET
integrated database retrieval system
