Xenopus laevis (African clawed frog): 108712573
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Entry
108712573 CDS
T01010
Symbol
dcp1b.S
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108712573 (dcp1b.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
108712573 (dcp1b.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108712573 (dcp1b.S)
mRNA degradation factors
5'-3' decay
Decapping complex
108712573 (dcp1b.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
108712573
NCBI-ProteinID:
XP_018110316
Xenbase:
XB-GENE-17343274
UniProt:
A0A8J0UNM9
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All DBs
Position
3S:5583722..5610562
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AA seq
552 aa
AA seq
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MAASGSAVLGRGLDISLAALRRHDPYIQSIVDVASQVALYTFSHKASEWEKTDVEGTLFV
YTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARFFIYGIWFYDKEECQ
RIAELMKNLTQQEQVKAQQGAASGVSPMTLGTGEGKEVDILQMLTKAKDEYSKCKCSEPK
MITNSSAIYTNPNLIKPIAVKPSESQPVPQPGKAPESEKQHLSLAALFGKPDKAQEETRL
HSEPGTVRHSVVRSLSYEEAGKVVDNVEKQLCPAIQKLMVAGGGLQPVSEIPENHNGRYP
PDRDIFPGLFQLVTQQTPFSSEDYESGKNLLQTLHTAQVVGPKADVASSCTAQSLNYYDS
SLQSQQTPASMPPLSSEPVMGSGTISPQELLKKLNLVRQEQQMQSNPRPALAAKFPVVSQ
SVTKTSWVESIPQLEKQNLLLQQACSPQRIPASVSPALLMSPMVFAQPNLQTRTNGTANL
STKEPSNLLFPTALPDNPACTNTLNSWNIALTRSQLQEALLHLIQNDDSFLNTIYETYLS
VLGQGGPGGRKT
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccgggagcgcagtgctgggccggggattggatattagtttggcggccctg
aggcgacacgacccgtatattcagtctatcgtggatgtggccagccaggtggctctttat
acgtttagccataaggccagtgagtgggagaagactgatgtggaaggaacactgtttgtg
tatacaagatctgcatcgcccaaacatggcttcactatcatgaacaggctgagcatggag
aatcggacagagccaatcactaaggatctggatttccagctacaagatccgtttctgctg
tatcgcaatgcccggttttttatctacgggatttggttttatgacaaagaagagtgccag
agaattgccgaactcatgaaaaacttaactcagcaggagcaagtgaaagctcaacaggga
gccgccagcggagtctctccaatgaccctgggcacaggagaaggaaaggaggtggatata
ttgcagatgttaaccaaagcaaaggatgagtacagcaagtgcaagtgctctgaacccaag
atgatcaccaactcatccgccatctacaccaaccccaacctcatcaagcccattgcagtg
aaacccagtgagtcccagcctgtgccacagccagggaaggctccggagtccgaaaagcaa
catttatcgctcgcggctctgttcggaaagccagacaaagcacaagaggagacgagactt
cattccgagcccggcactgtccgccattctgtggtccgttccctgtcctatgaagaagct
gggaaagtggtggataatgtcgagaagcagctctgcccggcaatccagaagcttatggtg
gcagggggtgggttgcaacccgtctcagagattcctgagaaccataatggcagatatcca
cccgacagggacatcttccctggtttattccagctggtcacccagcagactcccttttcc
agtgaagactatgagagtgggaagaatctcttgcaaacgcttcacacagcccaggtggtg
gggcccaaagcagatgtggcgtcctcatgcaccgcacaatcccttaattactatgacagc
tctctacagagccaacagactccagcctcaatgcctcctttgtcttctgaacccgtcatg
ggctccggcaccatctccccacaggagctgctcaagaagctaaatttggtgcgtcaggag
cagcaaatgcaaagcaatcccaggccggccctagcggcaaaattcccggtggtctcccag
agcgtgacgaaaacatcttgggtggaaagtattcctcagctcgagaaacagaatctgctt
cttcagcaggcctgttctcctcagcgtattccggcctccgtgtcaccagccctcctcatg
tcccccatggtatttgcccagccgaacctgcagaccaggacaaacggaacagccaacctc
tccaccaaagagccctccaatctgctcttccccacggcactcccagacaacccggcctgc
acaaacaccctgaatagctggaatattgccctcaccaggagtcagctccaggaggccctg
ctgcacctcatccagaatgacgacagtttcctgaatacaatttacgagacctacctttca
gtgctgggacaggggggaccaggcggacggaagacctaa
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