Xenopus laevis (African clawed frog): 108712637
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Entry
108712637 CDS
T01010
Name
(RefSeq) synaptopodin
KO
K21112
synaptopodin
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108712637
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Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
108712637
NCBI-ProteinID:
XP_018110439
UniProt:
A0A974D8P6
A0A1L8GRD7
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Position
3S:complement(15272098..15354721)
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AA seq
954 aa
AA seq
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MMLKADLSSLNTLGGPLVVRTDSQSLMESEPNEMNEYESWERTNENSDLNDEDDVFKNRQ
ESDYNQTTNWEFNDQEPVEIKSEVPSLTTDRVTSNSPVPISSNAVTAESVKTLLEIVPIA
KKPEEVHKSSWKAASSPKLKFTFQQPKKSYISRSVSLTEKELKEAQSISDNYAFQLSPTQ
SNCSKGALLFHRRRQKLNALEQRQHELIEQRGSKVNQETQHHQGIQGNQVKHEVRVLNSV
STESQRGSGRLQVGKKMEETSSDTGYAEETGNRWADDFKEQEPDFPPIDNRAPSPGASEE
DTQISMCANLKENLTVSDTNGLVNYIVEETKSPVKSEHNGQHRQCSEVHLTLSKPINVTN
RTARPFGCKQSSKEEQPLPDKTPVIDLPPPPTYAETLSSPPPVTRVRSPPAYSALYPIQT
EYLNPVNQVVTYEEGRVTPQSKSGILESLAAHRGPRKSMFTFIEKPKMAPNPDLLSMIQT
ADERRSKPNKHVETHAEDEPFALGTEASSFQNNKENRAADDFGPAEKGPDWLTCLKSPGV
TAKPPPVPIQGLTEATGKGADLFARRQSRMERFVVESPSPFDSARSPSPAMSLPPSWKYV
SNAHTPSSSFNHLAKVNQRSPKPAIAVAVSNTASETMQSQKELELSKRQPYQLQSSLFIL
SPTKDPMSCLPRAAPPPKPMVEFYRSARQTSCPTSPLVPSPTMYSPSYFNSIRPPSAVSP
SPASDTPNNFGRQTPINHVSPISPVPFSSTGVTSPRTKTVLQAPRPTFSATSAGLESQRS
KEFGTGSPISRAVQHRGSLDAWRSSPLSLLPGYEEGSRSKMHPPRSMSPSWSERSPSPFI
GERETGKQMKALIARNIINAARRKSASSVGALSPQSPVPNNGMWSPKFGNGTSLPDTPRS
RHSPTGSEISLDSEDSGTKSPGFRVYPLSPRGWYGSLKQKRASLPNNSPFTYTS
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttaaagcagatctgtcatctttaaacacattaggtggtccattggtggtacgt
actgattctcaatccttaatggaatctgagccgaatgaaatgaatgaatacgaatcttgg
gaaagaaccaatgaaaattcagatcttaatgatgaggatgatgtttttaaaaatcgtcag
gaaagtgactataaccaaacaaccaattgggaattcaatgaccaagaaccagtggaaatt
aaaagtgaggtgccaagcttgactactgacagagtcacatcaaattcacctgtgcctata
tcctccaatgcagttacagctgaatctgtcaagacattgttagagattgtccccattgct
aagaagcctgaagaagtacacaagtcatcctggaaggccgcgtcatcccccaagctaaaa
ttcacctttcaacagccgaagaagtcatatatttcacgaagtgtcagcctcaccgaaaag
gagctgaaggaagcgcagtccattagtgataattatgctttccaactgagccccacacaa
agtaactgttcaaaaggagcacttttgtttcatcgccgccggcagaaactaaatgccctt
gaacaaaggcaacatgaacttatagaacagagagggagcaaggttaatcaagagacacaa
catcatcaaggaatacaaggtaaccaagtcaaacatgaagtgagagttttaaattctgtg
tcaacagaaagtcaacgtggttctggtcgacttcaagttgggaaaaaaatggaagaaaca
tcatctgacacagggtatgcagaagaaacaggaaataggtgggcagatgacttcaaagaa
caagaaccagatttcccaccaatagataatagagccccctccccaggtgcttcagaagaa
gatactcaaatttcaatgtgtgcaaatcttaaggaaaacttgacagtgtcagatactaat
ggtttggtcaattatattgttgaagagactaaatcccctgtcaaaagtgagcacaatggt
caacacagacagtgctctgaggtacacctgactctgtccaaacctatcaatgtgactaac
agaaccgctaggccttttggatgtaagcagtcttctaaggaggagcagcctttaccagat
aaaactcctgtgatagatcttcctccaccaccaacttatgctgaaacattgtcaagtccg
ccaccagtaacacgtgttcgatcaccaccagcatattctgctttatatccaatacagacc
gagtatttaaaccctgttaatcaggttgtaacctatgaagaaggtagggtgactccccag
tcaaagtccggaatcttagagtcacttgcagcccatcgaggacctaggaaatcaatgttc
acattcattgaaaaaccaaagatggcaccaaatcctgaccttttgtctatgatacagaca
gcagatgaaagacggtcaaagcccaataagcatgtagaaacacatgctgaggatgaaccc
tttgcacttgggacagaagcttccagtttccaaaacaataaagagaatagagcagcagat
gattttggacctgctgaaaaagggcctgattggttaacctgtctgaagtctccaggggtc
acagcaaagccgcctcctgtaccaatccaaggtctgacagaagcaacagggaaaggtgca
gatttatttgctaggaggcagtcccggatggaaaggtttgttgttgaatccccatcacct
tttgactctgccaggtcaccttctcctgccatgtccctgccaccttcctggaagtatgtc
tcaaatgctcatacaccatcctcatcattcaatcatttagccaaagtcaatcaaagatca
cccaaacctgcaatagcagttgcagtatctaatactgcctcagagactatgcagtcacaa
aaagaactagagctttccaaacggcagccctaccaacttcagtcttcgctgtttatactc
tctccaaccaaagaccctatgagctgtcttccaagagcagccccaccacccaaacccatg
gtggaattttatcgttcagcaaggcaaacatcctgtccaacttctccactagttccttct
cctacaatgtattcaccatcttactttaattcaatccgacccccttctgctgtgtctcct
tctccagccagtgatacccccaataattttggaagacagacaccaatcaatcatgtttct
ccaatatccccagttcctttctcaagcactggagtaacatctccacgaaccaaaactgtg
ttacaagcacctcgcccaacattctctgccacaagtgccggtctggaatctcagagatca
aaagaatttggaactggatctccaatttcaagagctgtgcaacaccgcgggtcattggat
gcatggagaagctctcctctgtcactcctaccaggctatgaagaaggttccaggagtaaa
atgcaccctcctcgttccatgtccccttcatggagtgaacgttctccttctccgttcata
ggggagagggagactgggaagcaaatgaaagctcttattgctcggaacatcatcaatgca
gccaggaggaaaagtgcatcctctgttggtgctttaagtccccagtctcctgttccaaac
aatggaatgtggagtccaaaatttggcaatggcacctctcttcctgatacacctagatct
agacactctccgacgggctctgaaatctctctggattcagaagattctgggacaaaatca
cctgggttccgggtctatccattgagtccaaggggatggtatggaagtttgaaacaaaag
agggctagcttgcccaacaattcaccattcacgtacacgtcatag
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