KEGG   Xenopus laevis (African clawed frog): 108712758
Entry
108712758         CDS       T01010                                 
Symbol
ciao1.S
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein ciao1
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xla03036]
    108712758 (ciao1.S)
   03400 DNA repair and recombination proteins [BR:xla03400]
    108712758 (ciao1.S)
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    108712758 (ciao1.S)
DNA repair and recombination proteins [BR:xla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108712758 (ciao1.S)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 ANAPC4_WD40 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_Vps41 NBCH_WD40 Beta-prop_SCAP Beta-prop_TEP1_C eIF2A Beta-prop_ELP1_1st B-prop_COPA_B_2nd WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_HPS5 RMC1_N Beta-prop_NUP159_NUP214 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 108712758
NCBI-ProteinID: XP_018110646
Xenbase: XB-GENE-17339059
UniProt: A0A1L8GS13 A0A974HQK4
LinkDB
Position
3S:complement(28387823..28400991)
AA seq 333 aa
MKDTLALLSRVNAHPDSHCWFVAWNPSGTLLASCGGDRSIRIWGKDGDNWVCKSVLGEGH
QRTVRKVAWSPCGNYLASASFDATTCIWMKKKEEFECITTLEGHENEVKSVAWAPSGSLL
ATCSRDKSVWLWEVDEEEEYECVSVLNSHTQDVKHVVWHPNQELLASASYDDTVKLYREE
EDDWVCCATLAGHTSTVWSLAFDQTGERLATCSDDKTVRIWRQLENGEQGSKIDPNWKCV
CTLSGYHTRTVYDVNWNHLTGAIATACGDDAIRIFEEDSGSDPLQPTFSLTAHMPRAHTQ
DINCVAWHPKDPSLLASCSDDGEMAFWRYQKPE
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgaaggacaccctcgccctcctctctcgagttaacgctcacccagactcccactgctgg
tttgtagcatggaatccctctggaacattgctggcttcctgtgggggagatcgttctatc
cgcatctggggcaaagatggggacaactgggtgtgcaagtcagtccttggtgaaggacat
caacgcacagtccggaaagttgcctggtcaccctgtggtaattatttggcgtctgccagt
tttgatgccaccacttgcatctggatgaagaagaaagaggagtttgagtgcataaccacc
ctggaaggacatgaaaatgaggtgaaatctgtagcctgggcaccttcaggaagccttttg
gccacttgcagccgtgacaagagtgtgtggctttgggaagtggatgaagaggaggagtat
gagtgtgtcagtgtattgaattcacacactcaggatgtaaagcatgtggtatggcaccct
aaccaagagctcttggcatctgccagttacgatgatactgtgaagctgtaccgggaggag
gaagatgactgggtgtgctgtgccactttggcaggacacacttccactgtttggagcttg
gcctttgatcagacgggagagcgtctagccacctgcagtgacgataagactgtacgcatc
tggaggcagctagaaaatggagaacaaggaagtaagattgatcccaactggaagtgtgtt
tgcaccctgagcggatatcacaccagaaccgtgtatgatgtgaactggaatcatctgaca
ggagccattgctacagcctgtggagatgatgccatcaggatatttgaggaggattctgga
tctgaccccttgcagcccaccttttccctgactgctcacatgccacgtgcccatacccag
gatatcaactgtgtggcctggcaccctaaggaccctagtttgttggcttcatgcagtgat
gatggagaaatggcattctggagatatcaaaaacctgagtaa

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