KEGG   Xenopus laevis (African clawed frog): 108712872
Entry
108712872         CDS       T01010                                 
Symbol
ell3.S
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108712872 (ell3.S)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xla01009]
    108712872 (ell3.S)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xla03021]
    108712872 (ell3.S)
Protein phosphatases and associated proteins [BR:xla01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108712872 (ell3.S)
Transcription machinery [BR:xla03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     108712872 (ell3.S)
    Little elongation complex (LEC)
     108712872 (ell3.S)
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing HMW1C_N
Other DBs
NCBI-GeneID: 108712872
NCBI-ProteinID: XP_018110844
Xenbase: XB-GENE-17340273
UniProt: A0A974D9V5 A0A1L8GSQ4
LinkDB
Position
3S:46912177..46966509
AA seq 608 aa
MSRAGDELLGTLPYRTEARRSPRVNLFHLKLTDSALRCLRDFQRGQGSGPSSLQPVITFQ
GNQGYIKIPSPSPGCEDRVRIFAFYLSRESKDKPQSSFECIRQGTSWSGEKQLSCIGRIQ
DKITVCATDESYQLTRDRVSQVEKETSSRTAIEIKLEASHQNKYVKIPAKKNMEGSKEES
QCSRRPPVFLTPAAKKCNRVGVENRPLQEWVVHLLALKPYKKQDIIPRLEKAGENHREQK
DLLATLDLVGQVNPKDGSYSLKEEFYTQVQTDWVGYSPEERQHIESTLSRKHLNISESQN
IPTEMPAPPQRTQHGPPSSYSSARGQYSESKRPPAAGTTDNGSCKKMKTSHLDSRQRRSN
SPPVLNSNSRHKSSSETCAGLCSVPENQGVYSLHTHKNQSNHQSVPKSQHRESHKEKTPC
EAQDSGKAKPQGATSLCSQGHKKTEWNKQEKKQKDSSEEEEEDDDWEEGALQLERCLCSP
EENPPQAEPASPADGILDYCKKYGPITSADQRQVYEKDFTADYTEYLELHAKISQVLDHF
VRLGSKMKKLQKGTVEHKVAGKKILAEYKKFKVTYPGYREEKAKCEYLHHKLSHIKERIL
EYEKSPPT
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgtctcgggctggagatgagctactggggacccttccgtacaggaccgaagcccggagg
agcccccgtgtcaacctgttccacctcaagctgacagactcggctctgcgatgcctgcga
gacttccagaggggacagggttcgggaccctcttcattacagcctgtgatcacattccaa
ggcaaccaggggtatatcaagatcccatctcctagcccaggctgtgaggacagagttcga
atctttgccttctacctctccagggagagtaaggacaagcctcaatccagttttgagtgc
atacggcaaggcacatcatggtcaggggagaagcaactcagctgcattggcagaatacaa
gacaagatcactgtgtgtgctacagatgagtcctatcaacttactagggaccgtgtgtct
caggtggagaaagaaacttccagcaggacagctattgagatcaagcttgaagcatcacat
caaaataaatatgtgaagatccctgctaagaagaacatggaaggcagtaaggaggaatca
cagtgcagtcggagaccacctgtgtttttaacaccagcagcaaagaaatgtaatcgtgtt
ggtgtagagaataggccccttcaagaatgggtcgttcacctcctagccctgaagccttac
aagaaacaagacatcataccgagactagaaaaagctggtgaaaaccatagggagcagaaa
gatcttctggctaccctggatctggtgggacaggtaaatcctaaagatggcagctacagc
ttgaaagaagagttctacactcaagtgcagactgactgggtgggatatagcccagaggag
agacagcacatagaaagtactctgtccaggaagcatctgaacatttccgaatcacaaaat
attccaacagaaatgccagctcctcctcagagaacacagcacggccccccgtcttcttat
tccagtgccagaggccaatactctgaatctaaacgtccacctgctgcagggacaacagac
aatgggagttgcaaaaaaatgaagacatcgcacttggacagtcgtcagcgaagatcaaat
tctcccccagtgctgaactcaaactctagacataagagtagctcagaaacctgtgcaggt
ctgtgctccgtgcctgaaaatcaaggtgtttactctctacacacccacaaaaatcagagt
aaccatcagtcggtgccaaagagccaacatagggaaagccacaaggagaaaactccatgt
gaagcccaggactctggaaaggccaagcctcaaggggccacatctctgtgttcccaagga
cacaaaaaaactgagtggaacaaacaagaaaagaagcagaaggactccagtgaggaagaa
gaggaggacgacgactgggaagaaggagctcttcaactggaaagatgcctttgctctcca
gaagaaaatcctccacaagcagaacccgcttctcctgctgatgggatcctggattattgc
aagaagtacgggccaattacatccgcagatcagaggcaagtgtacgagaaggacttcact
gcagattacacagagtatctggagctccatgccaagatcagccaagtgctggatcacttt
gtgcggctcggatccaaaatgaagaagcttcagaaaggaacagtagaacacaaggtggct
ggaaagaaaatacttgcggagtacaagaagttcaaagtgacctaccctgggtatcgagaa
gaaaaggccaaatgtgaatacttacatcacaaactatcacacataaaggaacggatactg
gaatatgaaaaaagtcccccaacttag

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