Xenopus laevis (African clawed frog): 108712882
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Entry
108712882 CDS
T01010
Symbol
tmc3.S
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xla02000
]
108712882 (tmc3.S)
03037 Cilium and associated proteins [BR:
xla03037
]
108712882 (tmc3.S)
Transporters [BR:
xla02000
]
Other transporters
Pores ion channels [TC:
1
]
108712882 (tmc3.S)
Cilium and associated proteins [BR:
xla03037
]
Other cilia and associated proteins
Stereociliary proteins
108712882 (tmc3.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
108712882
NCBI-ProteinID:
XP_041443691
Xenbase:
XB-GENE-17330753
UniProt:
A0A8J1MQH9
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All DBs
Position
3S:complement(47813903..47857994)
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AA seq
1145 aa
AA seq
DB search
MATVSVSAALKSSKSMKRYKSVRRKASIYRIPPDSNSDEDDDDDGKEENNDPETIFQNIQ
MQKEIMANIRCRPWPMRQKLRSLRQAKEIVLKYEGRLTRTRGYQAAGAELWKKFLRVSYN
FVVLFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFVVIPEILAGAPFG
STVNKKIPDKELSSAQDLNTIWSLGGYLQYSVLFYGYYGRERKIGRAGYRLPLAYFLVGM
AVFAYSFITLLRKMAKNSRLSMASASDENYTFCWKIFCAWDYLIGNPEASESKTAAIVNG
IREAVLEEQEKHKSKNLAVTISLRILANILVLLSLAGSIYIIYFVVDRSQKLERTKIELS
LWEKNEVSVVVSLITMIAPSAFELVAALEMYHPRTTLRFQLARVLVLYLGNLYSLIIALL
DKVNSMSHSSNNTSLAPMYATTAFTMLSTASPGWDLNRTSTLALDIDLNRTKPMLPTNWT
LSPVASDIPGAKNECWETYVGQKAAQAVQLFNFNLYLLQEMLKLSIIDMIFTVASILLID
FFRGLFVRYLSNCCCWDLESKFPEYGEFKIAENVLHLVYNQGMIWMGAFFSPCLPAFNVF
KLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTVFSIVRYKPSIN
CGPFSGQEKIYDVISETIEKDFPAWFNKVMSYVSSPVVALPALLLLFMLIYYLQSIARSL
KFTNNQLRTQLHTERIEDKKKVFQMAIDLHCSGFIFLNVILFFFQPKLITIQFLCNLARL
QNKDGPENKAEPDSDIISQESSARSSTPRKNGSVVNFESPVSKGNRIHTISQSASRVDVP
QAASLTQSPSISGMQKQRTEHVPNRPASIKQRGDHDVDRTKNYNPISHKKQDHNAFSEPL
FRKGIKQSSPNHGAGAPSFVAKRPPTRYFIVNEQDSHMKLCSTSKLPRHFRMEESGDIVE
LYPRNIRRYVAQHPHRSYSPYLSEDEEDDLHRVLMRKSNRPHSMSDLRHPPRFYIGDRTD
NQISSNRDAAKMQYKSREGGFRHEGEKPHNRKKINHKNIDLAEHYVERHRKVKSKHKLEP
CLTESDSVSNASSSDQQNSSTDQYIQVIHNKDKYIKNSGKLTRKKVKTTVDLNVSQLNDL
ICSNV
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagtgagtgtatctgctgcgctgaagtcttccaagtctatgaaaaggtataaa
agtgttaggaggaaagccagcatctacagaattccacctgacagcaactcggatgaagat
gatgatgatgatggcaaggaagaaaataatgaccctgaaactatcttccagaatatacag
atgcagaaagagattatggcaaatatcagatgcagaccctggccaatgagacaaaagctg
cgctcgctcagacaagctaaagaaattgtcttaaagtatgaagggagattaacaagaaca
cgggggtaccaagcagctggagcagagctttggaaaaaatttcttagggtttcctataac
tttgttgtcctatttattccttgggaaatgaggataaagaagatagagagtcactttgga
tctggggttgcctcctactttatatttttgagatggctgtttgggataaacattgtcctt
acaatcatgactggggcatttgttgttattcctgagatccttgctggtgccccgtttgga
agcactgtcaacaagaaaattccagataaagaactttcatcagcccaggacctcaacacc
atctggtcattggggggttacctgcaatactctgtgttattttatggctattacggtcga
gaaagaaaaatagggcgagccgggtaccgccttccattggcgtattttcttgttggaatg
gctgtcttcgcctacagtttcatcacacttttaagaaaaatggcaaagaactctagactg
agtatggcaagtgcctcagatgaaaactataccttctgctggaaaatcttctgtgcgtgg
gattatctaattggcaatccagaggcatctgagagtaaaacagctgcaatagtcaacggc
attcgagaagcagttttagaagaacaagagaaacataaaagcaaaaatctagcggttaca
ataagcctcaggattctcgcaaacatcctagttctcctttcactggctggaagtatttac
attatttattttgtggtggacagatcccaaaagttggaaagaacaaaaatagaattgagt
ctatgggaaaaaaatgaggttagtgttgttgtctctctaatcactatgattgccccttct
gcctttgagcttgtagctgctttggagatgtatcacccaaggactactttgagatttcag
cttgcaagggtgcttgtgttatatcttggtaatctctacagcttaataattgccctgctg
gacaaagtgaatagcatgagtcacagtagcaataatacctccttggccccaatgtatgct
acaacagcattcaccatgttatctactgcttctcctggctgggacctgaacagaacctca
acccttgcactggatatagatctgaacaggacaaaacccatgctaccaaccaactggaca
ttatcccctgttgcttcagacatcccaggtgcaaaaaatgagtgctgggaaacctatgtt
ggacagaaagcagctcaggctgtgcaattatttaacttcaatctatatttactccaggaa
atgctgaagttatcgattatcgacatgattttcacagtagcgagtatactgcttattgat
ttctttcgtggactgtttgtgagatatttgagtaattgctgttgctgggatctggagagc
aaatttccagaatatggagaattcaaaattgcagaaaatgtcctgcatctagtctacaat
caaggaatgatttggatgggtgcttttttttccccgtgtcttccagcgttcaacgttttc
aaattaatagggttgatgtatttgagaagctgggcagtgctgacgtgcaatgttccgcat
cagcaagtcttcagagcttcaagatctaataacttttatttggctatgttgttgttcatg
ctgttcctgtgtatgctgccaacagtattttctatagtaagatataagccatctataaac
tgtggaccatttagtggacaagagaagatttatgatgttatttcagagaccatagagaaa
gattttccagcttggtttaacaaagttatgagttatgtcagcagcccagttgtggccctt
cctgcattactgcttctttttatgttaatttactaccttcagagtattgcaagatctctg
aaattcactaacaatcagctaagaacacagctacacactgaaagaattgaagacaagaaa
aaagttttccaaatggctatagacctacattgttcggggtttattttcctaaatgtcatt
cttttcttttttcaacctaagttgattacaatacaatttctttgtaacctagcccggctg
cagaataaagatggacctgaaaataaagcagaaccagacagtgatataatcagtcaggaa
tcatctgcacgttcatcaactccaagaaaaaatggcagtgtggtgaattttgaatctcct
gtgagcaaaggcaataggatacacacaatctcacagtcagcctcacgtgtggatgttcct
caagcagcaagtctaactcagagtccttctatatctggcatgcaaaaacaaaggacagag
catgttccaaacaggcccgcaagtatcaaacagagaggagaccatgatgttgatcgcaca
aaaaactacaatccaatatcacataaaaagcaagaccacaatgctttctctgagcctcta
ttcagaaaaggaataaagcaaagcagcccaaatcatggagctggagcaccaagttttgtg
gccaaaaggcctcccacaagatattttattgtcaatgaacaagattctcacatgaagctt
tgttcaacttcaaagctaccaagacatttcagaatggaagagtctggagatattgtggag
ctatacccaagaaatatcagaagatatgttgctcaacacccgcatcggtcctactcacct
tatttaagtgaggatgaagaagatgacttgcatagagttctaatgcgtaagtctaacagg
cctcattcaatgtcagatctccgacatccacctcgattctatattggggatcgtacagac
aatcagatatcatctaacagagatgcagctaaaatgcaatataaatcacgggaaggcggc
ttccgccatgaaggggaaaaaccacataatcgcaaaaagataaatcataaaaacatagac
cttgctgagcactatgtggaacgccaccgcaaagtaaaatcaaaacacaagcttgaacca
tgcttaactgagtcagattctgtctccaatgcatccagcagtgatcaacaaaacagcagc
acagatcaatacatacaggttatccataataaagacaaatatatcaaaaacagtggaaag
ctaactcgaaagaaggtaaaaactactgtggacttaaatgtttcccaactgaatgatctg
atttgttcaaatgtctaa
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