Xenopus laevis (African clawed frog): 108712914
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Entry
108712914 CDS
T01010
Symbol
sema6d.S
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
xla
Xenopus laevis (African clawed frog)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
108712914
NCBI-ProteinID:
XP_041444223
Xenbase:
XB-GENE-17340807
UniProt:
A0A8J1MS85
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Position
3S:complement(50826882..50874489)
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AA seq
1085 aa
AA seq
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MTLCMGFAWALLLTVSAVCAVNFPEDDEPINVVDYHYSRQYPVFRGRPSGNDSQHSLDFQ
LMLKIRDTLYVAGRDQVYAVNLNEVPKTELTPSRRLTWRSGPADRKNCAMKGKHKDECHN
YIKVFVPRNDEMVFVCGTNAFNPICRYYTLNTFEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATMADFQASDAVIYRSMGDGFALRTIKYDSKWLKEPHFLHAIEYGNYIYFFFREI
AVEHNNLGKAVHSRVARICKNDLGGSQRVLEKHWTSFVKARLNCSVPGDSFFYFDVLQSI
TDIIEINGIPTVVGVFTTQLNSIPGSAVCAFTMDDIEKVFRGRFKEQKSPDSVWTAVSED
RVPKPRPGCCARHGFGEGYRASTEFPDETLSFIKSHPLMDSAIPTIIEEPWFTKTRVRYR
LTAVAVDHLAGPYLNYTVMFVGSEAGVVLKILAKTSPFSLNDSVLLEEIDAYNRVKCSGN
SEEDRKVISLQMDRDHHALFVAYSGCIVRLPMSRCERYGSCKKSCIGARDPYCGWLNHET
CGRVKPGMFFGYEQDVEYGNTVQLGDCHDILPSATTPDYKIFGDPTSDIEVPSTSVTTMT
SSPVILPKVIGSWKPRMTGSRKFIYQDDPNTSEYIDPLTTGVHEGVRWEVQSGDANQMVH
MNVVITCVLAAFVLGAFIAGVIVYCYREMFTRKTRKIHKDAESAQSCTDSSGSFAKLNGL
FDSPVKEYHQSIDSPKHYTNILTSRKEMPPNGETKSMMMESQGQPPELSALPTPESTPVL
HQKSLQPIKNQWEKTHNNLNISRKETPLKSPQYFPSSPPPHSPLAHGQIPSAVVLPNATH
DFNTSFSNSNAHKSDKKLHNLEHSLGKQSSKRDHRRSVDSRNTLNDFLKHLNESTGSPKA
LMADIQVTHQNGQVPHQTLMLDTMGNMSEVPPKVPNREASLYSPSSTLPRNSPTKRVDVP
STPNGQMTPLESQRSYHKNSSQRHSISALPKNMNSPNGVLLSRQPSINRGGYMPPSPSTR
MDYMQGTPIIVHQQTSLSRQSSYTGHGTLPRMGVKRTPSIKPDVPPKPLFTSQNTSVRQL
NKYSY
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgacgctttgcatgggttttgcctgggcgttgctgctcaccgtaagtgcggtctgtgcc
gttaactttcctgaggatgacgagcctattaatgttgtcgattatcactattcaaggcaa
tatccagtatttagaggacgcccttcaggcaatgattcacagcacagcctggactttcaa
ctgatgctgaaaattcgagatacactttatgtggctggaagagatcaggtttatgctgtc
aatttaaatgaggtaccgaagactgaattaactccgagcagaaggttgacatggaggtcg
ggcccagcagaccgtaaaaactgtgcgatgaaaggaaagcacaaggatgaatgccataac
tacatcaaggttttcgttccaagaaacgatgagatggtgtttgtctgtggtacaaatgca
ttcaatcctatatgcagatattacacgttaaatactttcgagtatgatggggaagaaatt
agtggcttggcaagatgcccatttgatgccagacaaaccaatgtagccctctttgctgat
ggcaagttatattctgctaccatggccgatttccaagccagcgacgctgtgatctatcga
agtatgggggatggatttgctctgaggacaattaaatatgactccaaatggctgaaagag
ccacattttctccatgcgatagaatacggaaattatatctatttcttctttcgggagatt
gctgttgaacataataatctaggcaaggcggtgcactctcgggtggcacgcatatgcaaa
aatgacttgggaggctcacagcgagtgctggagaaacactggacttcattcgtaaaggcg
cgactcaattgctctgttcctggggattcattcttctactttgatgttctgcagtctatc
acagacataatagaaatcaatggaattcccactgttgttggtgtatttactacacagctg
aacagtatcccaggttcagcggtttgcgctttcaccatggatgacatagaaaaggtattc
agaggaagatttaaagaacaaaagtccccggactctgtttggacagctgtatctgaagac
agagtacctaagccaagacctggttgctgtgcaagacatggttttggagaaggctacagg
gcctctacagaatttccagatgaaaccttatcttttatcaagtcccatccactgatggac
tctgcaatcccaactataatagaagagccgtggttcactaagacacgcgtaaggtacaga
ttaactgctgtagcagtggaccacttggcagggccttacttaaattacacagtgatgttt
gtgggttctgaagctggtgttgtattaaagatcctagccaagaccagccccttttctctg
aatgacagtgtattactggaagagattgatgcctacaaccgtgtaaagtgttctgggaat
agcgaggaggatagaaaagtaatatcactgcagatggacagagaccatcatgccttgttt
gtggcatactcaggctgcattgttagactgcccatgagccgctgtgagcgatatggatcg
tgcaaaaagtcttgcatcggtgccagagatccttattgtggctggctaaaccacgagacc
tgcggaagagtgaaacctggcatgttctttggatatgaacaggatgtagaatacggtaac
acagtacagcttggcgactgtcatgacattttgccttctgcaactacaccagattacaaa
atatttggcgatccaacatctgacattgaggttccctctacttctgtaaccaccatgaca
agtagcccagtcattttacctaaagtgattggttcctggaagcccagaatgactggctct
cggaaatttatataccaagatgacccaaacacctctgagtatattgatccattaacaaca
ggtgtccacgagggtgtaagatgggaagtccagtcaggagatgccaaccaaatggtccac
atgaatgttgtgatcacctgtgtacttgctgcttttgtgctcggagcttttattgcagga
gtgatagtttactgctacagggagatgttcacaaggaaaacaagaaaaatccacaaagat
gcagagtctgctcagtcctgtacagattcaagtggaagttttgcaaaattaaatggattg
ttcgatagtcccgttaaagaatatcatcaaagcattgattcacccaagcactacacaaac
atactgactagtaggaaggaaatgccaccaaatggagaaaccaagtcaatgatgatggag
agtcaaggacagccacccgaactatcggcccttccgactcctgaatctaccccggtgctt
caccaaaagagtctgcagcctatcaaaaaccagtgggagaaaacacacaataacttaaac
atttcacggaaagaaactcctcttaaaagtccacagtattttccctccagccctccaccc
cattcacctttagctcatgggcaaataccgagtgctgttgttcttccaaatgccacccat
gacttcaatacttccttttcaaactcaaatgcccataaatcggataaaaaattgcacaac
ctagagcattctttgggaaaacagtcaagcaagagggaccacaggcgctctgttgattca
aggaatacattaaatgactttttgaaacatttgaatgaatccactggaagccccaaagct
cttatggcagatattcaagtaacgcatcagaatggtcaagttccacatcaaactttaatg
ctagatacaatgggaaacatgtctgaagtgccgcctaaagttcccaacagagaggcatct
ttgtattccccatcttctactcttccaagaaacagcccaacaaaaagagtggatgtgccg
tcaactccaaatgggcaaatgactcctttagaatcacaaaggagctatcataagaactct
tcacagaggcattcaatatcagccctgcctaaaaatatgaactcaccaaatggtgttttg
ctttcaagacagccaagtattaatcgaggaggatatatgcctccaagtcccagtacaagg
atggactatatgcaagggacacctataatagttcaccaacagacttctttgtcgcggcaa
agtagttatacagggcatggaacccttccccgtatgggggtaaaaaggacaccatctatt
aagccagatgtgccaccaaaacctttgtttacttcacaaaatacatctgtaagacagctg
aacaaatatagctactaa
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