Xenopus laevis (African clawed frog): 108712915
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Entry
108712915 CDS
T01010
Symbol
dmxl2.S
Name
(RefSeq) dmX-like protein 2 isoform X1
KO
K24155
rabconnectin-3a
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108712915 (dmxl2.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108712915 (dmxl2.S)
Membrane trafficking [BR:
xla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108712915 (dmxl2.S)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
108712915 (dmxl2.S)
RAVE complex
108712915 (dmxl2.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_IFT140_1st
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_LRRK2
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
108712915
NCBI-ProteinID:
XP_018110917
Xenbase:
XB-GENE-6489156
UniProt:
A0A8J0UVK2
LinkDB
All DBs
Position
3S:51605821..51684135
Genome browser
AA seq
3083 aa
AA seq
DB search
MHLHQVLTGAVNPGDNCYSVGSVNDIPFTAYGSGCDIVILANDFECVQIIPGAKHGNIQV
SCVECSQQQGRIAASYGNTVCIFEPFENINSHKRNSQLKKQWLRTGQFFLSSVTYNLAWD
PQGNQLLTATDYLQLWAPPSSDILEEEEDDMDSPDMENKVQPALNDWNCIWQCKTAVSVH
LMKWSPDGEYFATAGKDDCLLKVWYPLTGWKSSFLPQEYHEKRESLKDVHFSFVYLAHPR
AVIGFSWRNTSRFMPRASVCNLLLTSCQDGICRLWAETLLPEDSLLGGQIIEQNSCSSSL
SYLGKQKDKIEHALETIHHLKQLRRGRRRSSVLASHTEVLPSQHDVHCHISHHANSLCHF
HIAASINPNTDIPSVLAGTAFNLEEGYGGFVVHWLNNKELHFTLSAELFVQYLKTIVDQQ
TDKGDEEDEEEGLLMKLDNGEPEGGGSLTGSPEHEEAEKDLSTKASSPGTTLSLPTDLLD
RKIETLLSEWNKNADMLFTIHPVDGTFLVWHVKYLDEYNPGIFRQVQVSFSSRIPVAFPS
GDASSLSKNIIMYACTTSTREAVSAALQQEKMTSSVFAVNSLTCTRDLLNKNVKSSTVMM
VSKHIDGSLNQWAVTFADKSAFTTVLTVSHKFRYCGHRFHLNDLACHSVLPLLLTSSHHN
VLTTPDTDSPWELERSSKVADPMKNLKGFPGEHFRNAATQTFYDPNAIYSELILWRVDPI
GPLSYSGGVSELARINSLRTAAFCNVAWLPTLIPSYCLGTYCNSASACFVASDGTNLRLY
QAVVDARKLLDELSDPESSKLIGEVFNIVSQQSTARPGCIIELDAITDKCGSSTQLLHVF
QEDFILGYKAHKEEMKENETEVFFQPSQGYRPPPFSEKFFLVVIEKDFNNRSILNMWHLH
LKSVQAVVAKPAEVTVSENFLNVPGQQTAESSPDTSPGTSPMIRSASIANLQTASKLILS
SRLVYSEPLNIPRGVEVIRATPSAGHLSSSSIYPVCLAPYLLVTTCSDNKVRFWKCNVKS
FQDVGNEEQHSYQWKEWSLMNDGQDKSTSSVSIAGKPVAVSCSYTGRLAVAYKQPIQHNG
FVSKEFSMHVCLFECESTGGSEWVLEQTIHLDDLIRIGSMLDARVSVDSNLFVYSKSDVF
LNKDKHLMPNMKYLVHLDWVSKEDGSHILTVGVGSNIFMYGRLSGIVTDQTNSKDGIAVI
TLPLGGSIKQGIKSKWVLLRSVDLVSSVDGTPSLPVSLSWVRDGILVIGMDCEMHVYAQW
KHGIMPGDSETTASEDKVVKSKSELFQTHLVSKKTSVIDGAAIVDDVFGGPTVIQDGGLF
EAAHVVSPTLPQYHPTQLLELMDLGKVRRAKAILSHLVKCIAGEVAIVKDLDAGDEAAPK
RHLSRTISVSGSTAKDMIITGKDVTREYTEIDSVPPLPLYALLSADQDAPYPGTEETTTM
TQTKCSFDTKAEDQYSDLFHIQTVTTDDFIGLETEKKESKSKVINLSQYGPTFFGREHAS
VLSSHLMHSSLPGLTRLEQMFLVALADTVATTGTELGESRNNNYTGGDNLDECGLRYLLA
MRLHNCLLTSLLPLYRIQLLHQGLSTCHFAWAFHSEAEEELINMIPAIQRGDPQWSELRA
MGIGWWVRNINTLRRCIEKVAKASFQRNNDPLDAAVFYLAMKKKAVLWGLFRSQHDEKMT
QFFSHNFTEDRWRKAALKNAFSLLGKQRFGQSAAFFLLAGSLKDAIEVCLEKMEDIQLAM
IIARLYESEFDTSSTYESLLFERVLGCQKDGTSFCCAKLHPDPFLRSIAYWIMKDYTKAL
DTLLEQTPKEDDENPILIKSCNPVVFSFYNYLRTHPLLIRRHFGAPEANFATVGLKTEKN
YVDEITLIERKLFFTTANAHFKVGCPVLALEVLSKIPQLTKTFPINDEDICLPLFDKSSL
QTANKFSISREVNEPVSPVIKVTVSEDSASDFDWGLSALKVEDESLQLDWGDEKENETDY
EDALEMKTLETHDHKVKDVSPAVQSVEIISGGNEVDVIAEQLKFRACMKILMTELRTLAT
GHEVDGGKLRFQLYNWLEREIAAMHKIFNHESDSKDYTSETYESCESLDTREEKTDIGSY
ERHQIERRRLQAKREHSEKRKRWLQQNQALLRVFLSYCSLHGAQGGGLASVRMELKFLLQ
ESQQETTVKQLQSPLPLPTTLPLLSASVAVTKTVIANPVLYLNNHIHDILYTIVQMKNPP
HPDNKDPKVDTLHLLGASLSASIYQALCDSHSYSSQGEANQFTGMVYQGLLLSERRRLRT
ESIEEHATPNSLPASWPGVSSLINLLTTAQDEDQPKLNILLCEAVVAVYVSLLTHALATD
SSSQLFRLAAHPLSSRMWAAIFGGGVKLVVKPRKPPESVPGKTKDFDEHKKESACPLPNE
KQPTQDSALLYRKENTSIIDMALEYQVCAIPVLSEEIDKHRRRFNMRMLVPGRPVKDVAV
PPPVPTERPTYKETFIHPELSMWDYFVAKPFLPLSDSGVIYDSDESIPSDEEEEDDAFLS
DTQLQEHTNSSSYSWTLIRLAMVKLAIQNLKQFFPIAGLELSDLPVTSPLGIAVVKNLEN
WEQILQERMDQFEGPPPNYINIYPSELATGAGPAALRLKALLDADNTPFKSKDYTALPVR
RLWHFLVKQELLQDSFIRYAFTKKRKQSESVEDSVERYKVNNDHQKNKVEADLGYPGGKA
KVIHKESDMIMAFAINKANNNEIVLASTHDVQELDISSLLAAQPYIWIGEEYDRESKSSD
DLDFRGSLSAIPQSNVASFSLSQMQSSSSMPWLGSGQTATGAGVLIKRNLNNVKRMASHP
VHQYYLTGAQDGSVRMFEWSRPQQLVCFRQAGNARVTRLYFNAQGNKCGVADGEGFLSIW
QVNQNVTNPKHYLNWQCHTKTTSDFSFITSSSLVATAGQSSDNRNVCLWDTLISPNNSLV
HAFNCHENGATVLQYAPKQQLLITGGRKGAICIFDIRQRQTLHSFQAHDSAIKALALDLS
EEYFVTGSAEGNMKVWKLTGHGLIHSFKNEHAKQSIFRNIGAGVMQIEVGENKRIFSCGA
DGTLKMRMMPAALKTQSGIFDIL
NT seq
9252 nt
NT seq
+upstream
nt +downstream
nt
atgcatttacaccaggtcctgaccggggcggtgaacccgggggataactgctattcggtg
ggcagcgttaatgacattccattcacggcctatggatcaggatgcgacattgtcatacta
gcaaatgactttgagtgtgtacagattattcccggtgctaaacatggaaatattcaagtt
agctgtgtggagtgttcccagcagcaaggcaggattgctgcatcttatggcaacactgta
tgtatatttgaaccgtttgaaaacataaactcccacaagcgaaatagtcaactaaaaaag
cagtggctcaggacaggacagtttttcctgagttcagtgacttacaacttagcatgggat
cctcaaggtaaccagttgttaacagctactgattatttacaattatgggcccctccatca
agtgacattctagaagaggaagaggatgatatggacagccctgacatggagaataaagtt
cagcctgccctgaatgactggaattgtatctggcaatgcaagactgcagtctctgtgcat
ctgatgaaatggtccccagatggtgaatattttgcaacagcaggaaaggatgactgtttg
ctaaaagtttggtatccacttactggttggaaatcatctttcttacctcaagaatatcat
gaaaagagggaaagtttaaaggatgtgcatttctcttttgtttacttggctcatccaagg
gcagtgattggcttctcatggcggaatacaagcaggtttatgccaagggcttctgtgtgc
aatttgctccttacatcctgccaggatggcatttgtcgcctctgggctgaaaccttattg
ccagaggacagtttgcttggaggtcaaataattgagcaaaatagctgtagcagcagccta
tcctatttagggaaacagaaggacaagattgaacatgcacttgagacaattcaccatttg
aaacagttgagaagagggagaagaagatcttctgtccttgcaagtcacacagaagtactg
ccaagtcaacatgatgtccattgccacatttcacaccacgctaactcactgtgtcacttc
catatagcagcaagcattaatccaaacacagatatcccatctgttttggctggaacggca
tttaatttagaggagggttatgggggctttgttgttcattggctaaacaataaggaatta
cactttacattatcagctgaactgtttgttcagtatttaaaaacgattgttgatcagcag
actgataagggtgatgaggaagacgaggaagaaggactccttatgaaactcgataatggt
gagccagagggtggaggatcacttacaggctctcctgagcatgaggaagcggaaaaggat
ttgagcaccaaagcatcttcacctggcactacattgtctttacccacagatttactggac
cgcaaaattgaaacacttctttcagagtggaataaaaatgcagatatgctgttcacaatt
caccctgttgatggcacctttcttgtgtggcatgtaaaatatttggatgagtacaatccg
gggatctttagacaagttcaggtctctttttcttctcggattccagttgcttttccttca
ggagatgccagctctctaagcaaaaacattataatgtatgcttgtactacctcaaccagg
gaggctgtgtctgctgcactgcagcaagagaaaatgacctccagcgtctttgctgtaaat
tcattgacttgtacaagagaccttctaaataagaatgttaaatcttcaacagtcatgatg
gtgtcaaagcacattgatggatctttaaatcagtgggcagttacttttgcagacaagtca
gcctttaccactgtgcttactgtgtctcacaagtttagatattgtggtcacagattccac
ctaaatgatcttgcctgccactctgttctacctctgctgctaacttcatctcatcacaat
gtgctgacaaccccagacacggacagtccatgggagctggaacggagcagtaaagttgca
gatcctatgaagaacttgaaaggttttcctggagaacacttcagaaatgctgctactcaa
accttttatgatccaaatgctatttatagtgaacttatattatggcgtgtggatccaatt
ggtcccttgtcatatagtgggggagtttcagaactagctcgaataaattctctgcgtact
gctgctttctgcaatgtggcatggcttccaacacttataccaagttactgcttaggtaca
tactgcaattctgccagtgcttgctttgttgcctctgatgggacaaatttaaggctatac
caggctgttgtagatgcacggaagcttctggatgagttatcagatccagagtcctctaaa
cttattggtgaagtatttaacattgtaagtcagcagtctacagctcgacctgggtgtatc
attgaacttgatgcaattacagacaagtgtggctcaagtactcagctgcttcatgtcttt
caagaggattttattttgggttataaagctcataaagaagaaatgaaagagaacgagaca
gaggttttcttccagccatcccaaggttatcgtccaccacctttttcagagaaattcttt
cttgtggttattgaaaaagattttaacaaccgctccattctaaatatgtggcaccttcac
ttgaaatctgtccaagctgttgtggcaaagcctgctgaagtcacagtatctgaaaacttt
cttaacgttcctgggcaacaaactgcagaatcctcacctgatacctctcctggtacaagt
cctatgatacgatcagcatcaattgccaaccttcagacagctagcaagttaattctaagc
tcaagacttgtgtatagtgaaccacttaatattccaagaggtgtagaagtgataagggca
actccatcagcaggccacctaagttcatcctctatttacccagtgtgccttgcgccatac
ctactggttacaacctgctctgataacaaagttagattctggaagtgcaatgtaaagtca
tttcaagatgttggaaatgaggaacagcatagctatcagtggaaagaatggtctttaatg
aatgatggacaggacaaaagcactagttctgtaagcattgcaggaaaacccgttgctgta
agctgttcttatacaggaagacttgccgtggcatacaagcaacccattcagcataatggc
tttgtttccaaagaattttctatgcatgtctgcctttttgaatgtgaatctactgggggc
tcagaatgggtcttggaacaaaccattcatcttgatgacttgatcaggattgggagcatg
cttgatgctcgtgtcagtgttgacagcaatttgtttgtgtatagtaaatctgatgtgttc
ttaaacaaagacaaacatttaatgcccaacatgaaatacttagtacatttagactgggtg
tcaaaggaagatggttcacatatactcacagtgggagttggctccaatatttttatgtat
gggcgactctcgggtattgtaacagatcaaaccaacagcaaggatggaattgctgtcatt
actttgccactaggtggtagtataaaacaaggcattaaatcaaaatgggtcctgctcaga
tcagttgacttggtgtcttctgtggatggcactccttccttaccagtttcattgtcatgg
gtcagagatgggatcctagtgattggaatggactgtgaaatgcatgtgtatgcacagtgg
aaacatgggataatgcctggtgatagtgaaaccaccgcaagtgaagacaaagtagtaaaa
tctaagtctgaattatttcagacacatcttgtcagtaagaaaactagcgttattgatgga
gcagctattgtagatgatgtctttggaggcccgactgtaattcaggatggaggtctgttt
gaggctgcccatgtagtatccccaacccttccacagtaccaccctactcagttgcttgaa
ctaatggacctgggaaaagtaagaagagcaaaagctatactatcacatttggtaaaatgt
attgcaggagaagttgccatagttaaagaccttgatgctggagatgaggctgcaccaaaa
cgtcatctttcaagaactattagtgtgagtgggagcactgcaaaagatatgataataaca
gggaaggatgtaacccgagagtacacagaaatagattctgttcctccactgccactatat
gcccttctttctgcagaccaagatgctccatatccaggtacagaagaaactacaacgatg
acacagacaaaatgcagctttgatactaaagcagaggaccagtattctgatttatttcat
attcaaactgtgacaactgatgattttattggtttagaaactgagaaaaaagaaagtaaa
tccaaagtaatcaacctttctcagtatggtccaaccttctttgggcgtgagcatgccagt
gtgctttccagccatctgatgcactcaagtttgccaggcctgacacgtttagaacagatg
tttcttgttgctttagcagacactgtagccacaacaggtacagagcttggagaaagcaga
aataacaactatacagggggagacaatctggatgaatgtggtttaagatacttgctggcc
atgcgtttgcacaactgcctactgacatcacttctgcctctgtatagaattcaattgctc
caccaaggcttatccacctgtcactttgcatgggcgtttcactcagaggctgaagaggag
ttaattaacatgattccagctattcagcgtggtgatccacagtggtcagaacttagagca
atgggcattggttggtgggtccgtaacattaacacactcagaagatgcatcgagaaggtt
gctaaagcatcctttcagagaaacaatgacccattagatgctgcagttttttacctcgca
atgaagaagaaggctgtgctttggggtctcttcagatcccagcatgatgaaaaaatgacg
caattctttagccataattttactgaagatcgatggcgtaaggcagcattaaagaatgct
ttctctttgcttggaaaacaacgttttgggcagtctgctgctttcttcttactggctggc
tcattaaaggatgctattgaggtatgtttggaaaaaatggaagacattcaacttgcaatg
ataattgcccgtttatatgaatcagaatttgatacatcatcaacatatgagtctctactc
ttcgaaagagtattgggctgccagaaggacggaacaagtttctgctgcgcaaaactacac
cctgatccctttcttagaagcattgcttattggataatgaaggactacacaaaggcatta
gatactctgctggagcaaacaccaaaagaagatgatgaaaaccccattcttatcaaatca
tgtaatccagtggtcttcagtttctacaattacctccggactcaccctctgctgatccgc
agacattttggagctcctgaagcaaactttgcaactgtaggtttgaagactgaaaagaat
tatgtggatgaaattacacttatagaaagaaaattgtttttcacaactgctaatgctcat
ttcaaagttggatgtcctgttcttgctctagaagttttatcaaagattccccaactaacc
aaaacctttcctattaatgatgaagacatatgtttgcctttgtttgacaaaagcagtttg
caaactgctaacaaatttagcatcagtagagaagtgaatgaaccagtatcaccagtcata
aaagtgactgtttctgaagattctgcatctgattttgactgggggttgtccgctttgaag
gtagaggatgagtcacttcagctagattggggtgatgaaaaagaaaatgaaacagattat
gaggatgccttagaaatgaaaactcttgaaactcatgatcacaaggtgaaagatgtaagt
ccagcggtccagtcagtagaaatcatatctggaggcaatgaagttgatgtgattgctgaa
cagcttaagttcagggcatgtatgaaaattctcatgactgagcttagaactttagctaca
ggacatgaagtagatggtggaaaattgagattccaactctataactggttggaaagagaa
attgctgcaatgcataagatattcaaccatgaatctgacagcaaagattatacaagtgaa
acttatgaatcctgtgagagtttagatactcgggaagaaaaaactgatattggatcatat
gaacgccatcagattgaacgacgcaggttgcaagccaaacgtgaacactcagagaaacga
aagcgttggctgcaacagaatcaggctctgttaagggtatttttgagttattgcagctta
catggtgcacaaggaggtggtcttgcctctgtacgaatggaacttaaatttttactgcaa
gagtcacaacaggaaacaacagtaaagcagcttcaatcaccgcttcctcttcctacaaca
ctccccttgttgtctgcaagtgtcgctgtgacaaaaactgtaattgctaaccctgtgcta
tacctgaataatcacatccatgatattctgtacactattgtacaaatgaagaatcctccc
catccagataataaagacccaaaggtggacacacttcatttgttgggagcatcattgtct
gcctctatataccaagctttgtgtgacagccatagttacagcagccagggggaagcaaat
cagtttactggaatggtctaccaaggcctacttttgagtgagcgacggaggctgagaaca
gaaagcatcgaagaacatgccacaccaaattcactaccagcgtcatggccaggtgttagc
tctcttataaacctccttacaacggcacaagatgaagatcagcctaaactgaacattttg
ctgtgtgaagctgttgtagctgtatatgtgagccttttgacacatgcccttgccactgac
tccagcagtcaattgtttcggcttgcagctcatccattgagtagtcgaatgtgggcagct
atttttgggggtggagtgaagcttgttgtgaaaccaagaaaaccaccagaaagtgttcca
ggtaaaacaaaagattttgatgagcacaaaaaagaaagtgcttgtccattgccaaatgag
aagcaacctacacaagactctgcattgctttaccgaaaagaaaacacatctatcattgat
atggctcttgagtatcaagtgtgtgccatccctgtcctatctgaagaaatagataagcat
cgtcgtaggtttaacatgcgaatgcttgtgccaggtcgaccagtaaaagatgttgctgtc
ccaccaccagttcctacagagagaccaacatacaaagaaacatttattcatcctgagttg
agcatgtgggattactttgttgccaagcctttcctccccctgtctgacagcggtgtcatt
tatgactccgatgaaagtataccaagtgatgaggaggaagaagacgatgcatttctttca
gatactcagttacaggagcacacaaactcaagctcctacagctggacactgatacgcttg
gcaatggtgaaacttgcaatccagaatcttaagcagttctttcccatagctggccttgaa
ttatctgatctccctgtcacatcaccattgggcattgctgttgtaaaaaacctagagaat
tgggagcagatacttcaagagagaatggatcagtttgaaggccccccaccaaactatata
aatatatatcctagtgaattagctacaggggcgggacctgctgccttacgtctcaaggca
ttgttggatgctgacaatacaccatttaagtccaaagattacactgcacttccagttcga
aggctttggcactttcttgttaaacaggagcttctccaggattcatttataagatatgcc
tttaccaagaaaagaaagcagagtgagtcagtagaagacagtgtggagcgttacaaagta
aacaacgatcatcagaaaaacaaggttgaagcagaccttggttatccaggaggaaaagca
aaagtaattcacaaagagtctgacatgattatggcctttgcaattaacaaggcaaacaac
aatgaaattgtcttggcttccactcatgatgtgcaagaattagatatctcaagccttctg
gcagctcagccctatatatggattggagaagaatatgaccgagaatctaaaagctcagat
gaccttgattttagaggttctctctctgctattcctcagtcaaatgttgcttcctttagc
ctcagtcagatgcaatcttcttcatccatgccttggctaggtagtggacagacagccact
ggagctggggtgctcataaaaaggaatttaaataatgtgaaaaggatggcctcgcatcct
gttcaccaatattatcttactggtgctcaggatggcagtgtccgcatgtttgaatggagt
cgtccccagcagcttgtctgcttccgccaggctggaaatgcacgcgttacaagattgtat
tttaatgctcaagggaataagtgtggtgttgctgatggtgaaggatttttaagcatctgg
caagtaaaccagaatgtaacaaatccaaaacattatctgaactggcagtgtcataccaaa
acaacaagtgacttttcattcataacatcgtcaagcttagtggctacagctggtcaatct
agtgacaacagaaatgtttgtctatgggatacactgatatcacctaataacagcctggtt
catgcatttaattgccatgagaatggtgcaacagtacttcaatacgcacctaaacagcag
ctcttgattaccggtggaagaaaaggtgcaatctgcatctttgacattagacagagacaa
acacttcattcattccaggctcatgattctgcaattaaagcccttgccctggacttatct
gaagagtattttgttactggttctgcagaaggtaacatgaaggtgtggaagttaacaggc
catggtcttatccattcatttaaaaacgagcatgcaaagcagtctatttttcgtaacatt
ggtgctggcgttatgcagatcgaagtaggtgaaaacaagcgcatcttctcctgtggagca
gatggcactttgaaaatgaggatgatgcctgcagccttgaagacacagtctggcattttt
gatatcctctaa
DBGET
integrated database retrieval system