Xenopus laevis (African clawed frog): 108712922
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Entry
108712922 CDS
T01010
Symbol
myo5a.S
Name
(RefSeq) unconventional myosin-Va isoform X4
KO
K10357
myosin V
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108712922 (myo5a.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
108712922 (myo5a.S)
04131 Membrane trafficking [BR:
xla04131
]
108712922 (myo5a.S)
03029 Mitochondrial biogenesis [BR:
xla03029
]
108712922 (myo5a.S)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
108712922 (myo5a.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108712922 (myo5a.S)
mRNA cycle factors
P-body specific factors
108712922 (myo5a.S)
Membrane trafficking [BR:
xla04131
]
Others
Actin-binding proteins
Myosins
108712922 (myo5a.S)
Mitochondrial biogenesis [BR:
xla03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108712922 (myo5a.S)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108712922 (myo5a.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
Myosin_N
AAA_16
HTH_17
AAA_22
NPHP3_N
DUF5382
Motif
Other DBs
NCBI-GeneID:
108712922
NCBI-ProteinID:
XP_018110930
Xenbase:
XB-GENE-17336478
UniProt:
A0A1L8GSX4
A0A974D852
LinkDB
All DBs
Position
3S:complement(52200976..52291451)
Genome browser
AA seq
1825 aa
AA seq
DB search
MAASELYTKHARVWIPDPEEVWKSAEILKDYKPGDTILRLRLEEGTDLEYHLDAKTKDLP
PLRNPDILVGENDLTALSYLHEPAILHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
TDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASETNVEERVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRILGAHMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKMLRLGTANDFHYTKQGGSPVIDGVD
DQKEMRNTRQACTLLGIGESSQMGIFRILAAILHLGNVEIKSRDSDSCLIPPKHLPLNIF
CDLMGVDYEEMSHWLCHRKLVTAAETYIKPISRLQATNARDALAKHIYAFLFNWIVCHVN
KALLSSTKQNSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPKGSDSTWAQKLYNTHLKKCALFEK
PRLSNVAFIIKHFADKVEYQCEGFLEKNKDTVFEEQIRVLKASKFTLLTELFQEEEQNLS
PTSSAPPSGRTLLSRTGLRSLKPKPDQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVR
CIKPNDFKYPFTFDSKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDV
LSDWKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRMACIRIQKTIRS
WLLRKKYLRMKKAAITIQRYVRGYQARCYAQFLRRTRAAIIIQKFQRMYVVRQKYQHIQS
FTLALQSYLRGYAARKRYQEILRAHKATVIQKHVRGWLARVTYKRSLSAILYLQCCYRRM
MAKRELKKLKIEARSVEHYKKLNYGMENKIMQLQRKVDEQNKDNKSLLERLTHLEVTYNA
DKDKLRNDVDRLLHVEEEAKNAANRMVSLQDELARLRKELQQTQTEKNRIEERAEKYQTE
TERLVAELREQNALLKTEKEKLNLLIQEQAKKMTEDMEKKIIEETKQLELELNDERLRYQ
NLLNEYSRLEERYDDLKDEMNTMSPPKPGHKRRDSTHSSNESEYTFSSEITESEDFPYRY
EEPADRKTPLDMSLFLKLQKRVKELEQEKQVMQDDLDKKEEQIIRAKMMEEAKTPTRGTE
LEYESLKRQELESENKKLKNDLNELRKAITEKASPDAKGRGGTVYQVLLEQMTSVSEELE
VRKEEVLILRSQLVSQMEAIPHKDTMTESMVLSEDVQKMKDKREIAQAYTGMKETNRVLE
SQLQSQKKAFENEVEALRGEIQALKEENNRQQQLLAQNLQLPPEARIEASLQHEITRLTN
ENLDLMEQLEKQDKTVRKLKKQLKVFAKKIGELEVGQMENVSPGQTVDEPIRPVNIPRKE
KDFQGMLEYKKEDEAKLVKNLILELKPRGVAVNLIPGLPAYVLFMCLRHADYLNDDQKVR
SLLTSTINGIKKILKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNSSRQNEHCL
SNFDLAEYRQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGMSGIKPTGLRKRT
SSIADEGTYTLDSIVRQLNTFHSIMCQHGMDPELIKQVVKQMFYIIGAVTLNNLLLRKDM
CSWSKGMQIRYNVSQLEEWLRDKNLINSSAKETLEPLIQAAQLLQVKKKTDEDAEAICSM
CNALSTAQIVKVLNLYTPVNEFEERVLVSFIRNIQIRLRDRKESPQLLMDAKHIFPVTFP
FNPSSLALETIQIPGSLGLGFLTRV
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatccgagctgtacacaaagcatgcaagggtatggatccctgacccagaggaa
gtatggaaatctgcagagatcctcaaggactacaagccgggagacaccattcttcggcta
cgtctggaggaaggcacggatttggaataccatcttgatgccaagacaaaggatctcccc
cctctgagaaacccagacatccttgtgggagagaatgacctcactgccctgagttatctc
catgagccagccattctacacaatttgaaagtacggtttatagactccaaacttatttat
acttactgtggcattgttctcgtagctataaacccttatgaacagttgcccatctatggc
acagacatcattaatgcgtacagtgggcagaatatgggggacatggatccccatattttt
gcagtggcagaagaagcatataaacaaatggccagggatgagcgcaatcagtctattatt
gtaagtggagaatctggagctgggaaaactgtctctgccaagtatgccatgagatacttt
gcaacagtcagtggttctgccagtgaaacaaatgttgaagaaagagtgttggcctccaat
cccatcatggagtctataggtaatgctaaaaccacaaggaatgataacagcagtcgcttt
ggcaaatacattgaaattggctttgacaaacgctacaggattcttggtgcccacatgaga
acctatttgctggagaaatctagagtggtgtttcaggctgaagaagagaggaattatcac
atcttttatcagctgtgtgcatctgctgctttgcctgagttcaagatgcttcgacttggc
actgccaatgatttccactatacaaagcaaggaggcagtcctgtgattgatggcgttgat
gaccagaaggaaatgagaaacacaaggcaagcttgcaccttactaggaattggagaatca
tctcaaatgggaatttttaggattttagctgctatacttcacctggggaatgtggaaatt
aaatctcgggattcagatagctgcttaattccaccaaaacacttaccccttaatatattt
tgtgatcttatgggtgtggattacgaagagatgtctcattggctgtgccacaggaagctg
gttactgctgctgagacctacatcaagcctatttccaggttacaagccacaaatgccaga
gatgccctggctaagcacatctatgctttcttatttaactggattgtgtgtcatgtcaac
aaagctcttctttcctcaactaagcagaattcgtttattggcgtccttgatatatacggg
tttgaaacatttgaaatcaacagctttgaacagttttgtatcaactatgctaatgaaaaa
ctccagcaacagtttaatttgcatgtttttaagttggaacaagaagaatatatgaaggag
caaattccatggacgttaattgatttttatgataaccaaccttgtatcaatctcattgaa
gctaaaatgggtgttctggatcttcttgatgaagaatgcaagatgcccaaagggtcagac
agcacatgggcacagaagttatacaatactcatcttaagaaatgtgcattatttgaaaag
ccacgtctgtctaatgtggcttttattatcaaacactttgcagacaaggtagagtatcag
tgtgaaggttttctggaaaagaacaaagatacagtatttgaagaacaaattagagtgctg
aaagcaagtaagtttacactgctaacagaactgttccaagaagaggagcagaacttgagc
cctacttcttctgcgccaccctcaggcagaactttgctatcccgcactgggttgcgctcc
ctgaagcccaagcctgaccagacaagcaaggagcataaaaaaactgtcggccatcagttc
agaaattcccttcaccttctaatggagactctcaatgccacaaccccacattatgtgcgt
tgcattaagccaaatgacttcaagtaccccttcacatttgactctaaacgagcagtgcag
cagcttagggcttgcggtgtactggaaaccatccgaatcagcgctgctggatttccttct
aggtggacatatcaggaattttttagcagataccgtgttttaatgaagcaaaaagatgtt
ctcagtgattggaagcaaacctgcaaaaatgttctggagaagcttattttggacaaggat
aaataccagtttggtaagacaaagattttcttccgtgctggtcaagtggcctatctggaa
aagatcagagcagacaagctgagaatggcctgtatccgaatccagaagacaatccgatca
tggcttttgaggaagaaatatttgcgcatgaagaaagcagccataacaatccagagatat
gttaggggataccaggcacgatgttatgcacagtttctgcgtagaacacgggctgcaatt
attatccaaaaattccaaaggatgtacgttgttcggcagaagtaccagcatatacagtcg
tttactcttgctctccagtcatatctgcgtggttatgcagcaaggaagagatatcaagag
attcttcgagctcacaaagctaccgtcattcagaagcatgtgcgtggctggttagcccgt
gtcacatataagagaagtttaagtgctattctgtacctgcagtgttgttaccgcaggatg
atggccaaaagggaactgaagaaactaaagatagaggcacgctccgtggaacactacaag
aaactcaactatgggatggagaacaaaatcatgcagttgcagcgtaaagttgatgagcag
aataaagacaacaaatccttgctggagaggctaacacacctggaggtcacatacaatgca
gacaaagataagctaagaaatgatgttgacagactgctccatgttgaagaggaggccaaa
aatgcagcaaacagaatggtcagcttgcaggatgagcttgccaggcttaggaaagagctg
cagcaaacacagactgaaaagaaccgcattgaagagcgggcagagaaataccagacagag
actgaacggcttgttgctgagctgagagaacagaatgctttgctgaagactgaaaaagag
aaactgaatcttttaatccaggagcaggcaaaaaaaatgacagaggatatggagaagaaa
attatagaagaaacaaagcagttggagcttgaactgaatgatgaacgactacggtaccag
aatctcctcaatgagtacagccgcctggaggagcgatacgatgacctgaaggatgaaatg
aataccatgagtcctccaaagccaggacacaagcgcagagactctactcatagcagcaat
gaatcagaatacacttttagctctgagatcacagagtcggaagatttcccataccgatat
gaggagcctgctgatagaaaaacaccactggacatgtctctgttccttaagcttcagaaa
cgggtaaaggaacttgagcaggaaaagcaagtaatgcaagatgatttggataagaaggag
gaacagataatacgagccaaaatgatggaggaggcaaagacaccaaccagaggtacagaa
ctggagtatgaatcactcaagcgtcaggaactagaatctgagaacaaaaagctgaagaat
gatttgaatgagctgcggaaggcaatcactgagaaagcttccccagatgctaaaggccgt
ggtggaactgtgtatcaagttctcttggagcagatgacatcagtaagtgaggaacttgaa
gtgcgtaaggaagaagtccttatactgaggtcccagctggtgagccaaatggaagccatt
ccacacaaggacacaatgactgaatctatggttctttccgaggatgtacagaagatgaag
gataagagggaaattgcccaggcatatactggcatgaaggagacaaatagggttttggag
tcccagctgcaatcgcagaaaaaggcctttgaaaatgaagtggaagctctcagaggtgag
atccaggctctaaaagaggagaacaaccggcagcagcaacttttagctcagaacctccaa
ctgccacctgaagcacggattgaagccagcttgcagcatgaaatcaccaggcttaccaac
gagaacttggatctgatggagcaacttgaaaagcaagataagactgtccgcaaactgaaa
aagcagttgaaagtctttgccaagaaaattggggagctggaagtgggtcaaatggaaaat
gtttctcctggtcagacagtggatgaacccattcgtcctgttaatattccacgcaaagag
aaggacttccaaggaatgctggaatataagaaagaggatgaagcaaagctcgtcaagaac
ctcattttagaactgaagcctcgtggtgtagcagtcaaccttattccaggtctgccagca
tatgttttgttcatgtgtttgcgtcatgccgattacctcaacgatgatcagaaagttcgc
tccttgcttacttcaactattaatggtatcaagaaaatcttaaagaaacgaggagatgat
tttgaaactgtgtccttctggctgtccaatacgtgccggttcctccattgcttgaagcaa
tacagtggagaagagggatttatgaagcacaactcctcacggcagaatgagcactgtctg
tccaactttgacctcgctgaatacagacaagtcttgagtgacctggccattcagatttac
cagcagttggtcagagtgttggaaaacatcttacagccaatgattgtttcaggaatgctg
gagcacgagactattcagggtatgtctggaatcaagcctaccgggctgcggaagagaact
tccagtatagcagatgagggaacctacacattagactccattgtcagacagcttaatacc
ttccattccataatgtgtcagcatgggatggatcctgaacttatcaagcaggtggtcaaa
cagatgttctacatcattggtgccgtcacactcaacaacttgctcttgcgaaaggatatg
tgctcttggagcaaaggcatgcagataaggtacaatgtgagccagttggaagaatggctg
cgtgacaagaacctgataaatagcagcgctaaagaaacactggagccattaattcaagct
gctcagttactgcaggtgaaaaagaaaaccgatgaagatgcagaagccatttgctccatg
tgcaatgctctgtctactgcccagattgtcaaggtgttgaacctctacactccagtcaat
gagtttgaagagagggtgttggtatcatttataaggaatatacagatacgtttaagggat
aggaaggaatcccctcagctgctaatggatgctaagcatatcttccccgtcacgttccct
ttcaacccttcctcgcttgccctagaaacaattcagattcctggcagccttggccttggc
ttcctcacacgtgtctaa
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integrated database retrieval system
