Xenopus laevis (African clawed frog): 108712981
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Entry
108712981 CDS
T01010
Symbol
lingo1.S
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108712981 (lingo1.S)
Membrane trafficking [BR:
xla04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
108712981 (lingo1.S)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRR_NXF1-5
LRR_RPS2
V-set
LRRNT
Motif
Other DBs
NCBI-GeneID:
108712981
NCBI-ProteinID:
XP_018111061
Xenbase:
XB-GENE-17334051
UniProt:
A0A974DA85
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Position
3S:60095381..60220950
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AA seq
606 aa
AA seq
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MILQLPSCLCPILLIVVGSILSGSASGCPQRCDCSPQDRSVLCHRKRYLDVPEGIPTDTR
LLDLSKNRIKTLNQDEFSAFPYLEELELNENIVSIIEPGAFNGLFNLRSLGLRSNRLKLI
PLGVFTGLSNLTQLDISENKIVILLDDMFQDLYNLKSLEVGDNDLVYISHRAFRGLNSLE
ELTLEKCNLTSVPTEALSHLHGIITLKLRYLNINVIRDYSFKRLYRLKSLEIAHWPYLDT
MTSNSLYGLNLTSLSITHSNLSSIPYVSIRHLVYLRFLNLSFNPITAVEGSMLYELLRLQ
EFHLEGGQLSVVEPYAFRGLNHLKVLNVSSNNLNTLEESSFHSVGNLETLILDKNPLACD
CRLLWIFRRRWRLNFSRQQPSCSSPEYVQGKEFKDFPDVLQPNYFTCRRARIQDHTAQVV
YVDEGHTVHFFCRADGDPPPTILWQSPRKTFITSKSNGRLTVFPDGTLEVRYAQVQDNGT
YHCIASNAGGNDTSLAHLHVRSYSPNWPLKPNKTFAFMSNQPNESDVNSTRTSVPFPFDI
KTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGLSSADAPRK
FNMKMI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgattctccaactgccgtcctgtctgtgtcccatccttctgattgttgttggctccatt
ttgtctggctcggcatcaggttgtccccagcgctgtgattgctctcctcaggaccgatct
gtgctttgccaccgcaaacgttatcttgatgtccctgagggcattcccacagacacacga
ttgttggacctcagcaagaaccgtatcaaaactctcaaccaggatgagttctctgccttc
ccatatctagaggagctggagctcaatgagaacattgtgagcataattgaaccaggagca
ttcaatggtctatttaatctgcggtcactgggactgagaagtaatcgtctcaagctaatc
cctctaggtgttttcacagggcttagtaacctaacccaattggacatcagcgagaataaa
attgttatactgttagatgatatgttccaggacctttacaacctcaagtctcttgaagtt
ggtgataatgatctggtttatatctcccaccgtgcctttcgcggtcttaatagcttggaa
gagttgacattagagaagtgcaatctcacctcggtgcccacagaggcactttcccacctt
catggcatcatcaccctgaaacttcgatatctcaacatcaatgttatcagagattactct
ttcaaaagactgtaccggttaaaaagcctggagatagcacactggccatatctggacacc
atgacatccaatagcctttatggactgaacttaacttctctttcaattacacacagcaat
cttagttctataccttatgtctctattcgtcatcttgtttatctccgtttccttaacctc
tccttcaaccctattacagctgtggagggttccatgttgtatgagttgctaagattacag
gagtttcaccttgaaggtggtcaactgtctgtagtggaaccgtatgctttccgtggtctc
aaccacctgaaggtgctcaatgtctcgtctaacaatctcaatacactagaagaatcctct
tttcattctgtgggtaacctggaaacactcatactggacaaaaatcccttggcatgtgac
tgccgtcttttgtggatctttcgacgacgctggagacttaactttagccgacagcagccc
tcctgttccagcccagagtatgtacaagggaaggagttcaaggatttccctgatgtcctt
cagcccaactatttcacatgccggcgtgctcgcattcaggaccacactgcacaagtagta
tatgtggatgagggtcacactgtacattttttctgccgagcagatggagaccctccacca
accattttgtggcagtctccacgcaagacatttatcaccagcaaaagtaatgggcgtctg
actgtgtttccagatggcacattggaggtgcgctatgctcaggtacaagataatgggact
tatcactgtatagcaagcaatgcaggaggcaatgacacctccttggcccatcttcatgtg
cgaagctactctcctaactggcctctcaaacccaacaaaacctttgcttttatgtccaat
caaccaaatgagagtgatgtgaacagcaccagaacaagtgtccccttcccatttgatata
aagactttaattattgccacaactatgggtttcatctctttcctgggtgtagtcctcttt
tgcttggtcttgcttttcttatggagcaggggtaagggcaacaccaaacacaacattgag
atagagtatgtaccgcgaaagtctgatgctggactctcctcagcagatgcccctcgtaaa
ttcaacatgaagatgatctga
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