Xenopus laevis (African clawed frog): 108712990
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Entry
108712990 CDS
T01010
Symbol
bbs4.S
Name
(RefSeq) Bardet-Biedl syndrome 4 protein homolog
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108712990 (bbs4.S)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xla03037
]
108712990 (bbs4.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
108712990 (bbs4.S)
Cilium and associated proteins [BR:
xla03037
]
Primary cilia and associated proteins
BBSome
108712990 (bbs4.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_11
TPR_19
TPR_16
TPR_17
TPR_14
TPR_CcmH_CycH
TPR_12
ANAPC3
TPR_9
TPR_15
TPR_Slam
TPR_7
ARM_TT21_2nd
PknG_TPR
NatA_aux_su
ARM_TT21_5th
ARM_TT21
ARM_TT21_C
Clathrin
MAS20
Motif
Other DBs
NCBI-GeneID:
108712990
NCBI-ProteinID:
XP_018111093
Xenbase:
XB-GENE-6489222
UniProt:
A0A974HR08
A0A1L8GTC8
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Position
3S:complement(60826463..60864194)
Genome browser
AA seq
516 aa
AA seq
DB search
MAEELQVVGPQESGLRKSRVKKVPELPILERRNWLIHLHYVRKDYDSCKVAIKEQLQATQ
GVCEYAIYVQALILRLEGKIQESLELFQTCAVLNPTSSDNLKQVARSLFLLGKHKAAVEV
YNEAARLNQKDWEICHNLGVCYLFLKDLSKSKEQLTLALQLHRQDLSAITLGRIQLQEGD
VEGAIKTFMQALQLSPENTELLTTLGLLYLQNGLFQKAFEYLGNALTYDPSNYKGILAAG
CMMQSHGDYDVALSKYRVAASSVPESSPLWNNIGMCFYGKKKYVAAISCLKRALYLSPFD
WRVLYNLGLVHLSMQQYASAFHFLSAAISLHHGNAGLYMLLAVALTYLDDIENAKSSYQQ
AANLDQTDPLVNLNFAVLLYNQGDKKGALNQYQELERKVTSLRETATEFDAEMVDMAQKL
GAALQVGESLVWTRQTKDSKGKPRGAGKGHEAEQAPLGSNQALGRAMSSAAGYSKAGGLS
SGTSATTVSKHPSLPLEPEDPSHTRTAAPDYRRGHS
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagctgcaagtagtgggccctcaagaatctggtttgagaaaatcccgtgtc
aagaaagtaccggagcttcccatcctagagagacgcaactggttgatccatttacactat
gtaagaaaagattatgactcatgtaaggtggcgattaaggagcagctgcaggccactcag
ggagtatgtgaatatgcaatatatgtgcaagcattaatcctcagactggaaggaaaaatt
caggagtccctagagctttttcagacatgcgcagtcctgaatccaaccagctccgataac
ctgaaacaagttgctcgatctttgtttttattgggaaaacataaagcggctgttgaggtt
tacaatgaagcagcgagacttaatcaaaaggattgggagatatgtcacaatcttggagtc
tgctacctttttctgaaagatctgagcaagagtaaggaacagctaactttggcactgcaa
ttgcacagacaagatctcagcgctatcactcttggaaggatacagcttcaagagggagat
gtagaaggtgctattaaaaccttcatgcaagctcttcagctgtctccagaaaacactgaa
ctattaacaacactgggattgctgtacctgcagaatggtttgttccagaaagcatttgaa
taccttggaaatgctctcacatatgatcctagtaattacaagggcatcttagcagcaggc
tgtatgatgcagtcccacggagattatgatgtagccctcagcaagtacagagttgcagca
tccagtgtccctgaaagctcccctttgtggaataacattggcatgtgtttttatgggaaa
aagaagtatgtggctgctattagttgtcttaagcgtgcactttatctctccccatttgac
tggagagttctctataatctgggtctagtccatctcagcatgcaacagtatgcctcggct
ttccacttcctaagtgcagccatctctcttcaccatggcaatgctggcctatacatgctg
ctggcggtggcactcacatatctggatgatattgaaaatgccaagagctcatatcagcag
gcagcaaatcttgatcagacagatcccttggtgaatctgaattttgcagtcctgctgtac
aaccaaggagacaagaaaggagctttgaatcaataccaggagcttgagcgcaaagtcact
tctctcagagagactgccacggagtttgacgctgagatggtggacatggctcagaagttg
ggtgctgctctgcaggttggggagagcctagtatggactaggcaaaccaaagactcaaaa
gggaaaccgagaggagcaggaaaaggccatgaggctgagcaggctccattggggtctaat
caggctctgggaagagcaatgtcctcagcagctggatatagcaaggctggtggcctatct
tcaggaacaagcgccactacagtctccaaacatccctctctgccacttgagccagaagat
ccatcacatacgagaactgctgctccagactacaggagaggtcacagctaa
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