Xenopus laevis (African clawed frog): 108713046
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Entry
108713046 CDS
T01010
Symbol
usp6nl.S
Name
(RefSeq) USP6 N-terminal-like protein isoform X2
KO
K20133
USP6 N-terminal-like protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108713046 (usp6nl.S)
Membrane trafficking [BR:
xla04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
108713046 (usp6nl.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF7328
Motif
Other DBs
NCBI-GeneID:
108713046
NCBI-ProteinID:
XP_018111210
Xenbase:
XB-GENE-17346459
UniProt:
A0A8J0UQV0
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Position
3S:complement(68745950..68831939)
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AA seq
836 aa
AA seq
DB search
MIFQIVKELVSPSRQRAATKKDTEDQDVAFKAAQERADIVAKYDRGREGAKIDPWEDADF
LLYKVTDRFGFLHKEELPVHDEVAQKQKLIEIERTTKWVKMIKSWDRYKNSEKLHRRIYK
GIPLQLRGEVWSLILDVPKLKGEKRDLYLVLKQRARRLSTDIRQIDLDVNRTFRDHIMFR
DRYGVKQQALFHVLAAYSLYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHA
MHGFFVPGFPKLLRFQEHHDKILKKFMPKLKQHFETQELYTSLYTMKWFFQCFLDRTPFT
LNLRIWDIYILEGERILTAMSYTILKLHKRTLIKQSLEDLIEFLQEELARDFHYDDDYVI
EQLSLSLTELRRAKLGLPPLGKDDEFPKKPLGQIPPEPQPTVLNHIMNGQRTTHRLPSEV
KSDKVPSPSNLLKNSPNNERQRKNSMEKPNLKVAKKGHADSSAEQHKVENEYRKYSDYSL
NQKDTKLNNHAAANKNSNATPNTSKGITPLWKMPSESKNKDLLKMAEGKGKPPDYNAADH
SEYQAVIVKQKSRFVDMVGKRGSNASQYDNVPGGDDSDNADENRHSSDSFTPRNTVYSTS
TASRNPSKGSSPSRISENSGNVFIPHSPSRSVEGPDDVFTIKQPPPSYSNSLLYTENSVN
KPNREQYSPINLTSPSRRSYGQSFDIPPDQMPVNLSGRQYNVTSPSHRIEVLPTDESATL
HLSSYNQKLNTRYILPPVDYHTDHTFFPDTAFGTIGQPLNREVSHNFLSSLQKSPNFPPS
TGQHYNFSSVSANSPVRLRTSNRVPPPQYVHSNSGATPQLFRNPRDGIIMHGSVML
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgatctttcagattgtaaaggaactagtctcaccatcgaggcaaagagcagccacaaag
aaagacacagaagaccaggatgtagcttttaaagctgctcaggaacgagctgatatagtt
gcaaaatatgacagaggccgagaaggtgcaaagattgatccttgggaagatgctgacttt
ttactttataaagtcactgatcgatttggatttttacacaaagaagaactgccagttcat
gatgaggtagcacaaaagcaaaaactgattgaaatagaaagaactacgaaatgggtgaaa
atgataaaaagctgggataggtacaagaacagtgaaaagcttcacaggaggatttataag
ggtatcccacttcagcttagaggggaagtgtggtctctaatcttggatgttccaaaactg
aagggggagaaaagagatctttacctggtcctaaaacaaagagcaagacgcttgtctact
gacatcagacaaattgacttggatgtgaaccgaacgtttcgagaccacatcatgttcaga
gacagatatggtgtaaagcaacaagctttgtttcatgtgttggcggcctattcactgtat
aacacggaagttggatactgtcaaggaatgagtcagattacagctttactgctaatgtat
atgaatgaagaagatgccttttgggctctggtaaaactgttctcagggccaaaacatgct
atgcacggtttttttgttccaggtttcccaaagctcttgagattccaagagcatcatgac
aagatactgaagaaatttatgcctaaacttaagcagcattttgaaactcaggaactctac
acaagtctgtataccatgaaatggtttttccagtgcttcctagatcggactcctttcact
ctaaacttgaggatatgggacatttacatacttgaaggagagaggattctcaccgccatg
tcctatactatattaaaacttcacaaaagaacactaattaaacagtcattggaagatctc
attgagttcctgcaagaggagctagccagggattttcattatgatgatgattatgtaatt
gaacagctcagcttgtccttgactgaacttagacgagcaaagcttggccttcctcctctg
ggcaaagatgacgagtttccaaagaaaccgctgggccagattccaccagagcctcaacct
acagttctaaatcatattatgaatggacaaaggacaacccacaggcttccctctgaagtt
aaatcagataaggtaccttcacctagtaatctgttaaaaaactcgccaaacaatgaaaga
caaaggaagaactccatggagaaacctaatttaaaagtggcaaagaaaggacatgctgat
tccagtgcagaacaacataaagtggaaaatgaatataggaaatattcagattattcttta
aaccagaaggatactaaattaaataaccatgctgcagctaacaagaattcaaatgcaaca
ccaaatacatcaaaaggtattacacctttgtggaagatgccttcagaatccaaaaataag
gatcttttaaaaatggctgagggtaagggtaaaccaccagattacaatgcagcagatcat
tcagaatatcaagctgtgattgtcaaacaaaaaagtaggtttgtagacatggttggtaaa
agagggtcgaatgcatctcagtacgataatgtccctggaggggacgatagtgacaatgct
gatgaaaatagacatagttctgactcctttaccccgagaaatactgtttattcaacaagt
actgcatctcggaatccctcaaaaggttccagcccatcaagaatatctgaaaattcagga
aatgtcttcataccacactctccatcacgttcggtagagggtccagatgatgtatttacc
ataaaacagccaccaccttcatacagcaactcactactttacactgaaaattcagtgaat
aaacctaatcgtgaacaatattcacccataaacttgacaagcccttcaagaagatcttat
ggacaaagctttgatatacctcctgatcaaatgcctgtaaatctctctggacggcaatac
aatgtcacatctccttctcacagaatagaagtcttaccaactgatgaaagcgcaactctg
catttaagtagttataaccaaaaattaaacaccagatatattttaccaccagtggattat
catacggaccatacattctttcctgatactgcatttggaacaattgggcagcctttaaat
agagaggtctctcataattttttatccagtttacaaaagtccccaaattttccaccgtca
acaggtcagcactataatttctcttctgtttctgctaatagtccagtgagactaaggact
tctaatagagtaccacctccgcaatatgtacattccaattctggagctacgcctcagcta
ttcagaaatccacgtgatggtattataatgcatggatctgtgatgctgtga
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