KEGG   Xenopus laevis (African clawed frog): 108713275
Entry
108713275         CDS       T01010                                 
Symbol
ell.L
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108713275 (ell.L)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xla01009]
    108713275 (ell.L)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xla03021]
    108713275 (ell.L)
Protein phosphatases and associated proteins [BR:xla01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108713275 (ell.L)
Transcription machinery [BR:xla03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     108713275 (ell.L)
    Little elongation complex (LEC)
     108713275 (ell.L)
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing EzrA
Other DBs
NCBI-GeneID: 108713275
NCBI-ProteinID: XP_018111686
Xenbase: XB-GENE-17338025
UniProt: A0A974DZB7 A0A1L8HX53
LinkDB
Position
1L:complement(116015509..116088600)
AA seq 625 aa
MNGRDLKVGSWASGGGGGGGNGVVKMAALQEERSYGLSCGIVGGRVSVFHVKLTDSALKA
FENYQNSRASLKLKPAIRFQGSQGQITIPLPESPTEIRTFTFYLSNVGRDSPQGSFDCIQ
QYIQSNGHVKLDCLGSIQDKITVCATDDSYQKARQSMAQAEEENKSRGAIVIKMGSRYGV
KKIQVRKPAPGVPDAVPSRKHPTPVNLASAIRKTSTGLSQRPFKDRVVHLLALKPYKKPE
LILRLQKDGLSIQEKDLLDSLLQQVANLSAKDCTYTLKDCLYKEVQKDWPGYSEGDQQLL
KKILTRKLLLQQNSSTQPGDNAPLSPPKENVNSSSPLPQKRPSQNTDFTDPLSKKLRISH
FMHRSQPTFNGKLSSSNGKDSLAAIPSQIPSSDPVCSSSHLPAFHDPLSDSSTDTQHRDC
VSQEASERLGHPLQTDSNAEGKLNCNSQHAKPKKKSKKHKEKERSKEKLGEKQNCTPVKN
SGVTGGTLQDTIDLNGACSNSSVPTSTSEMPDYLLKYAAISSPEQRQSFKNDFNAEYSEY
RDLHARIERITRRFTQLDSQLKQLCQGSEEFKTIHDQILQEYRKIKKTNPNYSQEKNRCE
YLHNKLAHIKKLIAQYDQQQFQSCH
NT seq 1878 nt   +upstreamnt  +downstreamnt
atgaatgggagggatctgaaggtggggagctgggctagcggtggtggcggcggcggaggg
aatggtgttgttaagatggcggctctgcaggaggaacggagctatgggctgtcctgcggg
atcgtcggcggtagagtgtccgtcttccatgttaaactcaccgatagcgcactgaaggcc
ttcgaaaactaccagaacagccgggcatctctaaagctaaagccagccatccgattccaa
ggctcccaagggcaaatcaccattcccctgcctgagagcccgacggaaatacggactttc
acgttctatctgtcaaatgttggcagagacagtccccaggggagctttgactgtatccag
cagtacattcagagcaacgggcatgtcaagctggactgtctgggcagcatccaggataaa
atcactgtgtgtgccacagacgactcctatcagaaggcacggcagagcatggcgcaggct
gaggaggagaacaagagtaggggtgccattgtcatcaaaatgggcagcagatatggagtt
aaaaagattcaggtgcggaaacctgctcctggagtcccagatgctgttccctcccggaag
caccccactccagtcaaccttgctagtgccatacggaaaaccagcacagggctgtctcag
cgacccttcaaagacagggtagtgcacttactggccctaaagccttacaagaaacctgaa
cttatcttgcgattgcagaaagatggactttcaatacaggaaaaggatttgcttgacagc
ctcctgcaacaggtggcaaatctgagtgccaaagactgcacctatacattgaaagactgt
ttgtacaaggaagtacagaaggactggccaggctactctgaaggagaccaacagctctta
aaaaagattcttactcgaaagctgttactgcagcagaattcaagtacccagcctggagac
aatgcacctctgagccctccaaaagaaaatgtgaattcttcctcccctctccctcagaag
cggccgtcacaaaatacagatttcactgatcccttatcgaagaaacttcgaatctcccat
ttcatgcatcgctctcaacccaccttcaatggaaagctgagctcttccaatggaaaggat
tcacttgctgccataccttcccagatcccttcgtctgacccagtctgttccagctcccat
ttacctgcttttcatgaccccctttcagactccagcactgatacccaacacagagactgt
gtgagccaggaggcctcagagaggctaggccatccacttcaaacagacagtaatgctgag
ggcaaactgaactgtaactctcagcatgccaagcccaaaaagaagtctaaaaagcacaaa
gaaaaggagcggtccaaagagaagttaggggaaaagcaaaactgcactcctgtcaagaac
tctggcgtaactggtggaactcttcaggatactattgatttaaatggtgcatgcagtaac
tccagtgttcccacttccacatcagaaatgccggattacttactgaaatatgcggcaatc
tcatctccggaacagcggcagagtttcaaaaatgacttcaatgcagagtacagtgaatac
agagacttgcatgccaggatagagcgtataacacgcaggtttacacagttggactcccag
ctcaaacagctttgtcagggctcagaggaattcaagactatccatgatcagatcctacag
gaatatcgcaaaatcaaaaaaacaaatccaaactacagtcaagagaagaaccggtgtgaa
tatcttcataataaacttgcccacataaaaaaactcattgcacagtatgaccaacagcag
tttcagtcttgccattga

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