Xenopus laevis (African clawed frog): 108713276 Help Entry 108713276         CDS       T01010                                  Symbol rad50.S Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism xla  Xenopus laevis (African clawed frog) Pathway xla03440   Homologous recombination xla03450   Non-homologous end-joining xla04218   Cellular senescence Brite KEGG Orthology (KO) [BR:xla00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     108713276 (rad50.S)    03450 Non-homologous end-joining     108713276 (rad50.S)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     108713276 (rad50.S)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:xla03032]     108713276 (rad50.S)    03400 DNA repair and recombination proteins [BR:xla03400]     108713276 (rad50.S) DNA replication proteins [BR:xla03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     108713276 (rad50.S) DNA repair and recombination proteins [BR:xla03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      108713276 (rad50.S)     BRCA1-C complex      108713276 (rad50.S)    NHEJ (non-homologous end-joining)     MRX complex      108713276 (rad50.S) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 Rad50_zn_hook AAA_21 SbcC_Walker_B SMC_N ABC_tran TilS-like AAA_22 AAA_29 AAA_16 zf-met AAA_13 Motif Other DBs NCBI-GeneID:  108713276 NCBI-ProteinID:  XP_018111683 Xenbase:  XB-GENE-17343258 UniProt:  A0A1L8GVF0 A0A974HS08 LinkDB All DBs Position 3S:complement(110131976..110192205) Genome browser AA seq 1311 aa AA seqDB search MSKIEKMSIQGVRSFGINDKNKQVIQFFTPLTILVGPNGAGKTTIIECLKYMTTGDFPSG SKGNTFVYHPKLAHETDVRAQICLQLKDVNGEPVAVQRSIICRQKGKSTECKTVDCVITR IKHGGPVSLRPKCEEMNKEMISALGVSSAVLNNVIFCHQEDSNWPLSEGKRLKGKFDEIF SITRYSKALETLRDVRMKEDQNVSNYQEEIKYLKENKEKAREIQDNLQSKEKQLTVSKEN VKSIESQLEPLKDRLADIQRNLFKVIRLENEIKALESRKRTMEQDNQDLMEKMEKVFQGT DEELNEMYQNQCFVREKERKLNDHQREMDRACKESQRLNREKGELLVQQGHLQLEADNHQ RYIKTRDSLIKSLAVQLELDGFELTPFNQRQTSNFQMLVKERQEEVEAHANQILREFSER EAMQQRQIDEIRDKKTGLERTIELKSSTESKKHTDLKKVKYDLQQLEGTSDRLHELDEEL QKTAHALENVEKSCNLEALKGEVVQLQTQKSELDRNVRELDQEMEQLNKHTMTRTQMDML KNDKADKDEQIRKMKSRHNDELISLYEYFPNKKQLEDWLYSKREDINQTRDKLARLTKEL VAAEQNSNHLSNELCQKEKQSASFEEKVFDVCGSQDFNSDLSQLLEDIEKTSKQRAMLAG ATAVYTQFITTLTEENQPCCPVCQRTFPSEAEVQDVINDMQSKLCLVPDKLKAAEDELKR KEKRKDEMMELKPMRQMLSDLKEKEIPEIRNKLEAINREIKRLQNDVEEQESLIVTFVSE EARAEACLQDISLMEQYQMELRDVDQKIAHYATKLLGVDLNRTVQQVNQEKLEKHHSLDN VSRRIELLQNHLQNQQEQVQQLKSRVNELTAEKLHISSNLQQRQQLEEQNVELTTELHCL SIEIKESREQVFPLESTLQKLQQEKQALLQRKESSYREAQEKVNDIKEKVKKINLHTKDI EKYIQDGKEEFKEQKESELQELTVRLNECEELKEKINREMVTIRQDIDTQKIQERCLQDN LTLRKRIEELKQVEEERDQLLKEMGQMKVTQMEKEYQELENKRETLKTNHSLTLGRQKGF EDEILRFKNELNEPKYKDAEEEYREKMIVMRTTELAIKDLDIYFKTMDQAIMKFHSIKME EINKIIRDLWCSTYRGQDIEYIEIQSEPDEGISAADNRRTYNYRVVMIKGDTELDMRGHC SAGQKVLASLIIRLALAEIFCSNCGVLALDEPTTNLDHENIDSLAHALVEIIKSRSRQRN FQLIVITHNEDFVELLGRSEYVEHFYRIKKNIDQCSEIIRCSVSSLASYLH NT seq 3936 nt NT seq  +upstreamnt  +downstreamnt atgtctaaaatagagaagatgagcatccaaggggtgagaagctttggaataaatgataaa aacaaacaagttattcagttcttcacccctctaaccattttagtcggacccaatggagca gggaaaacgactataattgagtgtctcaagtatatgactacaggagatttcccatcagga tccaaaggaaatacatttgtgtatcatcctaagttggctcatgagacagatgtccgtgca cagatttgtttgcaactcaaagacgttaatggagaacctgtggctgttcagcgttctatc atctgcaggcagaaaggaaagtcaacagaatgtaaaacagtagattgcgttataaccaga attaagcatggagggccagtcagtctaagaccaaaatgtgaagaaatgaataaggaaatg atcagtgcattaggagtctcttcagcagtcctgaataatgtaatattctgtcaccaggag gattccaattggcctctgagtgaaggaaagcggttgaaaggaaagtttgatgaaatattc tcaataacaaggtatagtaaggctttggaaaccttaagggacgttcgtatgaaagaagat cagaatgtgagtaattatcaggaagaaatcaaatatctgaaagagaacaaggaaaaggca agggaaattcaagataatcttcagagcaaagagaaacagctaacagtttccaaagaaaat gtaaaatctattgaaagtcaacttgagccacttaaggatcgcctggcagacatacagaga aacctttttaaagtgataagacttgagaatgagataaaagctttagagagccgtaagaga actatggagcaggataaccaagatttaatggagaaaatggagaaggtcttccaaggtaca gatgaagaactcaatgaaatgtatcaaaatcagtgctttgtaagggaaaaagaaagaaag ctaaatgatcaccagcgtgaaatggacagagcttgcaaagagtcccaaaggcttaatagg gaaaaaggagaactgctggttcagcaaggacacctgcagctggaggcagataatcatcag cgatacattaagacacgagactctctaatcaagtctttggcggtacagttagaacttgat ggttttgagctaactccatttaaccagaggcaaacaagcaactttcagatgttggtgaaa gaaaggcaagaagaggttgaggcccatgcaaatcagatcttgagagagttttcagaaagg gaggctatgcagcagaggcaaatcgatgaaattagagacaagaaaactggtcttgaaaga actattgagctgaaatcctctacagagagcaaaaagcacacagacctaaagaaagtcaaa tatgaccttcagcagttggaaggaacctctgataggctacatgaactagatgaagagctt cagaaaactgcgcatgcactggagaatgtggaaaagagctgcaacttggaagcattgaaa ggggaagttgtccaactacagacccaaaagtctgagctggacagaaatgtgcgggagctg gatcaggaaatggagcagctaaacaaacacacgatgacaagaacccaaatggacatgcta aagaatgacaaagcagacaaagatgaacaaataagaaaaatgaaatctagacacaatgat gagttgatttcattatatgagtattttccaaataagaagcaacttgaagactggctatat tccaaaagggaagatatcaatcagactcgagacaaactggcaagacttactaaggaatta gtagcagctgagcagaactcaaatcacctgagcaatgagctttgccaaaaagaaaaacag tctgcctcatttgaagagaaggtctttgatgtgtgtggcagccaggacttcaacagtgat ctgtcacagctcctggaggatatagagaaaacttctaaacagagagccatgcttgctggt gcaacagcagtttacacacagtttattaccacgctgaccgaggaaaaccagccctgctgc cctgtttgtcaaagaacatttccctcagaagcagaggtgcaggatgtaattaatgacatg cagtccaagctgtgcctggttcctgacaagctgaaggcagccgaagatgaattaaaaaga aaagaaaagaggaaggatgaaatgatggaactgaagccaatgagacaaatgctttcagac ctaaaagaaaaagaaatcccagagataagaaacaagctagaggcaataaacagagaaata aaacgactgcaaaatgatgtagaagagcaggaatctctcattgtcacatttgtatctgaa gaggcgcgtgccgaagcctgtttgcaggacatctccctcatggaacaatatcagatggaa cttagagatgtggaccagaaaatagcacactatgctactaaactactgggggtggacctt aaccgcactgtgcagcaggttaaccaagaaaaactggagaagcaccacagcctggataat gtttctagaagaattgagcttttgcaaaaccacttacaaaatcagcaagaacaagtccag caactgaaaagtagagtgaatgagctaacagcagaaaagcttcacatttcaagtaatctt cagcagcggcaacagttggaagagcaaaatgtcgagctgacgactgagcttcattgtttg tccatagagataaaggaatctagggagcaggttttcccactggaatccactttacagaaa cttcaacaagaaaagcaggcgcttctacagaggaaggaatcaagctacagagaggcacag gaaaaagttaatgacattaaggaaaaagtgaaaaaaatcaatttgcatacaaaggatatt gaaaagtatattcaagacggaaaggaggaatttaaggagcaaaaagaatccgagctacaa gaattaactgtgagactgaatgagtgcgaagagctgaaggaaaaaataaacagagagatg gtcactattaggcaggatatcgacacgcagaaaatacaagaaagatgtcttcaagacaac ttaactttgagaaaacggatagaggagcttaaacaggtggaggaagaacgagaccaactt ctcaaagaaatgggacaaatgaaagtcacgcaaatggaaaaggaatatcaagagctggaa aacaaaagggaaactctgaaaactaaccacagcctaacacttggacgacagaaaggattt gaggatgagattttacgcttcaagaatgaattaaatgagccaaagtacaaagatgctgaa gaagaatacagagagaaaatgattgtaatgagaacaactgagcttgccatcaaagatctg gatatttattttaaaacaatggaccaagcgataatgaagttccatagcataaaaatggag gaaatcaacaaaattatccgtgacctgtggtgtagtacataccgaggccaagatattgag tatattgaaatccagtcagagccagatgagggtatttccgcagcagataatagacgaaca tacaactatcgtgtagtcatgattaaaggcgacactgaactggatatgcgaggacattgt agtgccggacaaaaggtcctggcatcccttatcattcgcctggcattggcagaaattttc tgctcgaattgtggggttcttgctcttgacgaacctactaccaacttggatcatgaaaat attgattctctggcacatgcgctagttgagatcataaagagtcgctccagacagaggaac tttcagcttattgttataacacacaatgaggattttgtggaacttcttggacgctcagag tacgtggagcatttttataggattaaaaagaacatagaccagtgctctgaaatcatccgg tgcagtgtcagctctctggcatcctatcttcattag

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