Xenopus laevis (African clawed frog): 108713278
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Entry
108713278 CDS
T01010
Symbol
pdlim4.S
Name
(RefSeq) PDZ and LIM domain protein 4
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108713278 (pdlim4.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xla04990
]
108713278 (pdlim4.S)
Domain-containing proteins not elsewhere classified [BR:
xla04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
108713278 (pdlim4.S)
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Ortholog
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
108713278
NCBI-ProteinID:
XP_018111687
Xenbase:
XB-GENE-17335626
UniProt:
A0A1L8GVB1
A0A974D910
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Position
3S:110522511..110626197
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AA seq
332 aa
AA seq
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MFMSVTLNGPSPWGFRLVGGRDYNTPLTISKINPGSKAELSNLYPGDVILEINGENTENM
NHLDAQNKIKACTDQLTLSINRHDARTLLNEEELKRQQRKYSLEAELQDIFPSEITPTRR
SAPVSPRGSPIDIRQIPQQQYNNPSKLYTNNNNIEANLSSHMARINLSSPHSVDPLRSVP
RSKNGIDMESDVYKMLQDYEEPVSRPKQSGSFKYLQDMLEAGENGEKPERPPSSRNIKSP
VSKLSSPVPGLQILPQCTRCGNGIVGTIVKARDKLYHPECFMCDDCGLNLKQRGYFFIEE
QLYCETHAKERVKPPEGYDVVAVYPNAKVELV
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgttcatgagcgttacactcaatggcccttctccttggggatttaggctggtggggggc
agggactacaacacccctctgaccatttcaaagattaatcctgggagcaaggcggaattg
tctaacctatatccaggagatgttattctggaaatcaacggggagaacacagagaacatg
aatcacctagatgctcagaacaagatcaaggcctgcacagatcaactgacactttccata
aacagacatgatgcgaggaccttgttaaatgaagaagaactgaaaaggcagcagcgaaaa
tatagtttagaggcagaattgcaggatatcttcccttcagaaatcactccgactcggaga
tcagcaccagtatctccccgagggagcccaattgacatccgacaaataccacaacaacag
tacaacaacccgtccaagctctacacaaataacaacaatatagaagcaaacttatcttca
catatggcaagaatcaatctctcatccccacacagtgttgacccattgagatcagtccca
agaagcaagaatgggatagatatggagtcagatgtgtacaagatgctccaggattatgaa
gagcctgtgtcacgacccaagcagtccggatccttcaagtacttgcaggacatgctggaa
gctggagagaatggtgaaaagccggaaaggccgccaagctccagaaacatcaaatcacca
gtgtctaaactgagcagcccagtgcctggcctgcagatactccctcagtgcaccagatgt
ggcaatgggattgtaggcactatagtaaaggctcgagacaagctctaccacccagaatgc
tttatgtgcgacgactgtggcttaaacctgaagcaaaggggatatttctttattgaagag
cagctatactgcgaaactcatgccaaggagagagtcaagccgcccgaaggatacgatgtg
gtcgctgtatatcctaacgctaaggtggaactcgtctaa
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