Xenopus laevis (African clawed frog): 108713400
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Entry
108713400 CDS
T01010
Name
(RefSeq) survival of motor neuron protein isoform X1
KO
K13129
survival motor neuron protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
108713400
Spliceosome [BR:
xla03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
108713400
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GFIT
Motif
Pfam:
SMN_Tudor
SMN_YG-box
SMN_G2-BD
TUDOR
Tudor_3
Agenet
SGF29_Tudor
Motif
Other DBs
NCBI-GeneID:
108713400
NCBI-ProteinID:
XP_018112158
UniProt:
A0A8J0UZ17
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Position
1L:120798108..120819796
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AA seq
411 aa
AA seq
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MAACDREILYHNKDSSQSEDIDEWDDAALIKSYEKAVQSFQDMLRCSDKNRRQEGASAAG
DKRETNRETEWGREGHKDMQKEEAEKWNKKQKAQPPPPFIHPSSLSSSQPLHSKWKVGDA
CSAVWSEDGCVYPATVLSIERETGTCVVQYNGYGNTERHQLDEIVSVGSSEDSTPPVRQW
KVGDRCSVQWSEDGQIYSAIIRSVDEVLGTCVVVYEGYKNEEVQNLAELMPPTSALPRSR
SKKQASPARLGLDSSGDEEDTDWQYTCRSSTSSPDIARNWRKQGKKSDWLYTFPPPPPPP
PPPPPPPPSLPPPPPPKGCFWPPPPPPVRAHLPAWHNWPPSAPLPPPPPPPPFFSTDWED
YDEDEQEDEDVLACMLMAWYMTGYHTGFYKGLKQGRAEALRPNLKKVSRRK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtgtgacagggagattttgtatcacaacaaggacagctcacagagcgaagat
attgatgagtgggatgatgctgccctcattaaatcctatgaaaaggcagtacaatccttc
caggacatgttaagatgcagcgacaagaataggagacaagagggggcctctgctgcaggg
gacaagcgggaaacaaatcgggaaacagaatggggaagagagggccacaaggacatgcaa
aaagaggaggctgaaaagtggaacaagaaacagaaggcacaaccaccccctcctttcatc
catccttcgtctctctcctcctctcagccccttcattcaaaatggaaagtaggggatgcc
tgcagtgctgtatggtcagaggatggatgtgtatatccagcaacagttttatccattgag
cgagagactgggacatgtgtggtacaatataatggatatggaaatacagaaagacaccag
ctggatgaaatagtatcagtggggagtagtgaggatagtaccccccctgttagacaatgg
aaagttggtgatcgttgttcagtgcagtggtctgaggatggacagatctattctgctatc
attcgctcagtggatgaggtgctgggcacctgtgtggtggtgtatgaggggtataagaat
gaggaggtgcagaatttggctgagctgatgcccccaaccagtgccctccctcgcagtcgc
agcaagaagcaggcgagtcctgcacgtctaggactggacagctcaggggatgaggaggac
actgattggcagtatacatgcagaagttccacctcatcccctgatattgcacgaaattgg
aggaaacaaggaaaaaaatctgactggctatataccttccctcctcccccaccaccgcca
cctcctccgcccccaccacctccttcactacctcctcctccacccccaaagggttgtttt
tggcccccacctcctcctcctgtgagggcccatctaccagcatggcacaactggcctccg
tctgcaccattaccccctcctcctccgccacctcctttctttagcacagactgggaggat
tatgatgaggatgaacaagaagatgaagatgttttagcctgtatgctaatggcttggtat
atgactgggtatcacaccggcttctacaagggtctcaaacaaggaagggcagaggccttg
agacccaacctaaaaaaagtatcaaggagaaaatag
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