Xenopus laevis (African clawed frog): 108713624
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Entry
108713624 CDS
T01010
Symbol
npas4.L
Name
(RefSeq) neuronal PAS domain-containing protein 4A
KO
K26457
neuronal PAS domain-containing protein 4
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108713624 (npas4.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108713624 (npas4.L)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS_9
HLH
DUF7207
Motif
Other DBs
NCBI-GeneID:
108713624
NCBI-ProteinID:
XP_018112651
Xenbase:
XB-GENE-17344870
UniProt:
A0A1L8GJZ3
A0A974D239
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Position
4L:complement(29544084..29548499)
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AA seq
723 aa
AA seq
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MYRSTKGASKARRDQINAEIRNLKELLPISEGDKVRLSYLHIMSLACIYTRKSVFFSRGH
QTEELECLLSNQDLMDFVHSLPGFLLTFTSEGKLIYVSENVADHLGHSMVDLVAQGDSIY
DIIDPSDHFVMRNQLAMPSSPDSERMFRCRFNTSKTARRQSAGNKMVLIRGRFQQPPAGT
YWSSNPVFTAFCIPLDPKPRVIQSHLFMDFFESQHAKDLSVLDVSDSSLQYLCYEKSDLI
SKSWYNLIHPEDLTHLSKQHLKLMNESCEGRSEIVIRLQRKDQLWVWIYSILILEASEAS
ITSYNYIISEEEAWCLRQQLTSEETPVPFTAGASSYQDTLLSPGDLSSPDQVFTPLANTP
TSAGQSFDFSEPMAIGSEDPILCQTTIPLVEDVVPPEGQSENQSLFTLFQPTSHEQTFRR
DQLGAVTPKDFTCTPPYTPHQNCSFLFGTLENPPQTTSEQETTILNPEMYYSYCSSLYEK
LPPTPDSPGDGGDCTVMRVPEIPGPLFVDLPMLPEGLVTPETSPINQAMFKYSEQEKSEI
DLLVKQIGSLANVFNGVATKELSSSDTMLLSGHGLAYRSVSLPACLPEIDTTTSFPRSWK
SVDLSIFLTCQDPSLPSSGHPVCSLFKDLPDSPPFAETGSPCSALEEDEVGGDLSASPSM
TSNVTTDLSPEECNFLEELMSYKTDLEAGASEIQCDRFNDELYQLQIQLQDGFQQDGSGK
PSF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtacaggtctacgaaaggcgcctcaaaggctagaagggaccagattaatgcagagatt
cgcaatttaaaagaactccttcctatctctgaaggcgacaaagtccgactgtcctacctt
cacatcatgtcccttgcttgcatttatacaaggaaatctgttttcttttcaagagggcac
cagacagaggaattagaatgtcttctctccaaccaggacctgatggattttgtccatagt
cttcctgggtttcttctgacatttacaagtgaaggaaagctgatatatgtatcagaaaat
gtagctgatcatcttggacattcaatggttgatctggtggctcaaggggacagcatctat
gacataattgacccttcagatcattttgtcatgaggaaccagctagcaatgccttcatct
ccagatagtgagcgaatgttcagatgccgattcaacacttcaaagacagctagaaggcaa
agtgcaggcaacaagatggttcttatcagaggaaggtttcagcaaccaccggctggtacc
tactggtcatccaacccagtatttacagctttctgcattccccttgatcccaagcccaga
gtgatccagagtcatttattcatggatttctttgagagtcagcatgctaaggacctatcc
gtgctggatgtgtcagacagttctttacagtatttgtgttatgaaaaaagtgatttgatc
agcaagtcctggtacaatctgattcatcctgaagatcttactcatctctccaaacagcat
ctcaaactgatgaatgaatcctgtgaaggcagatcagaaattgtaatacgtctgcaaaga
aaagatcaactatgggtttggatttattccattctgatacttgaggccagtgaggcgtcc
atcacttcatataactatataatcagcgaggaagaagcctggtgcttgaggcaacagctg
acttctgaggagactccagttccttttacagcaggggcatcctcctatcaagataccctc
ctttcaccaggagacctttcaagtccagatcaagtcttcaccccccttgcaaacacacca
acaagtgcaggacagtcatttgatttctcagagcccatggctattggttcagaagatcca
attctttgccagaccactatccctcttgtagaagatgtagtgccccctgaaggccaatca
gagaatcaatccctcttcacactctttcaaccaacttcacatgagcagaccttcagaaga
gatcagcttggagcagtaacacccaaagacttcacctgcactccaccttatactccacac
caaaactgttctttcctttttgggactctagaaaacccccctcaaacaacatctgagcaa
gaaaccaccatccttaacccagaaatgtattattcctattgcagctcactctatgagaag
cttcctccaactccagacagtccaggggatggtggtgactgcacagtaatgagggtacca
gaaattccaggaccactgtttgtggatctgccaatgcttccagaggggttagtcacccct
gaaacatccccaattaaccaggctatgttcaaatattcagagcaggagaagagtgaaata
gacctcctagtcaagcaaattggttctttagccaatgtcttcaacggtgtagccacaaaa
gaactttcatcctctgatacaatgctactgagtggccatggactggcatatagaagtgtc
tcactacctgcgtgtcttcctgaaatagatactactacttctttcccacggtcctggaaa
agcgttgacctctcaatattcttaacatgccaggacccatcacttccaagtagtggccac
ccagtctgcagtctattcaaagacttacctgactcacccccttttgcagaaacagggtct
ccctgcagtgccctagaggaggatgaagttggaggagatctctctgcctccccatccatg
acctcgaatgtgacgactgatctgtccccagaagaatgtaacttcttagaggaactgatg
tcctacaaaacagaccttgaggcaggtgcctcagagattcaatgtgaccggtttaatgat
gagttgtatcaactccagattcagttgcaagacggcttccaacaagatggaagtggaaaa
ccttcgttttga
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