Xenopus laevis (African clawed frog): 108713750
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Entry
108713750 CDS
T01010
Symbol
prdm11.L
Name
(RefSeq) zinc finger protein 862 isoform X1
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108713750 (prdm11.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
108713750 (prdm11.L)
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
SET
FOG1-like_PR
DUF4641
zf_PR_Knuckle
Motif
Other DBs
NCBI-GeneID:
108713750
NCBI-ProteinID:
XP_018112795
Xenbase:
XB-GENE-17331095
UniProt:
A0A974D3J2
A0A1L8GIP0
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Position
4L:complement(7084741..7103848)
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AA seq
1180 aa
AA seq
DB search
MSEISKECRVAFSLGLGDIVRVKREVGSPVEEQGHGHFRSVGPNSRCTDMDPKRLKEKRE
STMSKSLQQVDFWFCESCQEYFVDECPSHGPAILVPDTSVPIGIPERAALTVPCGIEVVK
DMSGESEVRCVNELIPKGHMFGPYQGQICSQDKSSGFFSWLIVDNNNRYKSIDGTDEAYA
NWMRYVVISREEREQNLMAFQHSEKIYFRACRDIQPGEKLRVWYSEDYMKRLHSMSQETI
NRNLTQGDKRLLRENNERNLENQEDVKGTFPLAALKQGKSLYKRSCEEVDLHPHTKKKKI
DLIFKDVLEASLESARIDEYRLVTSSPVSGQKNTKYPFENHGDRCIMNQQCSSPQNQTRN
TRDWKTKHISALGLNRQGSFPEDEGEDHSSVKAESPTESSAIGGVDEVPTTSFCPNCIRL
KKKIRELRAELEMLRSGKMAETSQMTNQINEIPEFADASAPEAMAIATTMIDEDEQEVDS
ADESVSNDMLAATDEPSKMSAGSGRRIRRFKQEWLKKFWFLRYSSTLNEMWCHVCRQYTV
QSSRTSAFIIGSKQFKIHTIKLHSQSNLHKKCLQLYKLRMHPEKTEEMCRNMTLLFNTAY
HLAMEGRPYYDFRPLAELLRKCELRVVDQYMNEGDCQILIHHIARALREDLVERIRQSPF
LSIILDGQSEDLLADTVAVYVQYTSSDGPPATEFLSLQELGLPTTESYLQGIDRAFSALG
IRLQEERPTIGLGVDGANITAGLRANLYMTIRKTLPWLLCLPLMVHRPHLEILDAISGKE
LPCLEELENNLKQLLSFYRYSPRLMCELRLTAATLCEETEFLGDIRAVKWIIGEQNVLNA
LIKDYLEVVAHLKDVSGQTQRADTSAIALALLQFLMDYQSIKLIYFLLDVIAVLSRLAYV
FQGEYLLVSQVDEKVEEAIQEISRLTDSPGEYLQEFEENFRESFNGIALKNLRVAEAKFQ
SIREKICQKTQVTLAQRFDSRSRMFVKACQVFDLSVWPRTTEELINYGEEDMLQIYELLD
SIPNFLNDLGREGADTRGNLLMEWRELKADYCTKSGFKDLIGHICKYKQRFLFLNKIVQI
LKVLPTSTACCEKGRNALQRLRKNNRSRLTLDQTSDLLTIAVNGAPITNFDAKRALDSWF
EEKSGNSYSLSAEMLSKMSSLDHKPVLQSMEHGTEYYQDI
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaattagcaaggaatgtcgggtggccttcagcctcggccttggggatatcgtg
cgggtgaagagagaagtgggatctccagttgaggagcaggggcacggccatttccgctcc
gtggggcccaactctcgctgcacggacatggatcccaagaggctgaaggagaagagagag
agcaccatgtctaaaagtctccagcaggtggatttttggttctgtgagtcctgccaggaa
tactttgtggacgaatgcccgagtcacggacctgccatcttggtcccggatacttccgtc
cccataggaataccagagcgagcggcattgactgtgccctgtgggatagaagtggtgaag
gacatgagcggggagagtgaagtgagatgtgtcaatgagctcattcccaagggccacatg
tttggcccctaccaagggcagatctgttcccaggacaaatcgtcaggcttcttttcatgg
ttgatcgtggataacaacaacagatacaaatcaatcgatggcacggatgaagcctatgca
aactggatgaggtacgtagtcatttccagagaggagcgagagcagaatctaatggctttc
caacacagcgagaagatctacttccgtgcctgccgggacatccagcctggggagaagctg
cgagtgtggtacagcgaggattatatgaaacgacttcatagtatgtctcaggagaccatt
aaccgcaacctcacccaaggagataagaggttgctaagggaaaataatgagagaaatttg
gaaaaccaagaggatgtgaaaggcactttcccattggctgccttaaagcagggaaagagc
ctgtacaagaggagctgtgaggaggtggacttgcatcctcacacgaagaagaaaaaaata
gacctcatcttcaaagatgtccttgaagcttctttggaatctgccaggatagacgaatat
cgtttggttaccagtagccctgtttcagggcaaaaaaatactaagtatccttttgagaac
catggagataggtgcataatgaatcagcagtgctcttctcctcagaaccaaacgaggaac
acgagggactggaaaacaaagcatatctctgctttgggtttgaacaggcaaggcagcttt
ccagaggacgagggagaagaccactcatcggtaaaggcagaaagcccgacggagtcttca
gcgataggtggcgtagatgaagtcccgaccacttctttctgccccaactgcatacggttg
aagaagaaaattagagaactccgggccgagttggaaatgctgaggtccggcaagatggcc
gaaacgagccagatgaccaatcagatcaacgagattccagagtttgcagacgcttcagcc
cctgaagccatggccattgctaccaccatgatcgacgaagatgaacaagaagtggattcg
gcggacgaatccgtgtccaatgatatgttagcagccactgacgagccttcgaaaatgtct
gctgggagcggcagaagaattcggcgttttaagcaagaatggctcaaaaagttctggttt
ttgaggtactcctccaccttaaatgagatgtggtgtcatgtctgcaggcagtacaccgtg
cagtcgtcgcggacgtctgcctttattattggttccaaacagttcaagattcataccatc
aagctccacagccaaagcaacctccataaaaagtgcttgcaactctacaagctcaggatg
catccagaaaagacggaggaaatgtgccgaaacatgactcttcttttcaatacggcgtac
cacttggcgatggaaggcaggccttattatgacttccgacctttagcagaactactgaga
aagtgtgaactcagagtggttgaccagtacatgaacgagggcgattgtcagatcttgatc
caccacatcgccagagcacttcgagaagacttggtagagcgtatcagacaatctcctttc
ctcagcattattttggatggacagagtgaagacttgctggccgacacagtggcggtttat
gtccagtacactagtagcgatgggccacctgctacggagtttctctctcttcaagagtta
ggtttgcccacgacagagagttatcttcagggaatcgacagggctttctctgcattggga
atcaggttgcaagaggagaggccaaccataggcttgggagtggatggagccaacatcacc
gcaggacttagagcaaatttgtatatgacaatcaggaaaactttgccttggctactatgc
ttgccattaatggtacatcggccccatttagaaatattggatgcaattagcggtaaagaa
ctcccctgcctagaagaattagagaacaatctgaagcagttgcttagtttctatcggtac
tctcctcgactgatgtgtgagctgaggcttaccgccgctaccctttgtgaagaaactgaa
ttcctaggtgacatccgagctgtgaagtggatcatcggggagcagaatgtcctcaacgcc
ttgattaaggactatctagaagtggtggcacatctcaaagatgtcagcggccaaacgcaa
agggcggatacgtcggcaattgcactggccctcctgcaatttctcatggattatcagtca
attaagctcatctacttcctgcttgatgtgatcgcagtcttgtcgaggctagcctatgtc
ttccaaggtgagtacctcctggtttcccaagtggacgaaaaggtggaagaggccatacaa
gagattagtcggttgaccgattcccccggcgaatacctccaggagtttgaagaaaacttc
cgggaaagctttaacggcatcgccttgaaaaatttacgagtggccgaagccaaatttcag
tcgattcgggagaagatctgccagaagacccaggttacgttggctcaacggttcgattcc
cgcagtcggatgtttgtaaaggcgtgccaggtgttcgatctgtccgtgtggcccaggacc
accgaagagctcatcaactacggcgaagaagatatgctacagatttatgaacttctggat
agcattccaaatttcctcaacgacctgggtagggaaggtgctgacacgaggggcaaccta
ctaatggaatggcgggagctcaaggctgattactgcaccaaaagtggcttcaaggatctc
atcggccacatctgcaaatacaagcaacggtttctgtttctcaataagatcgtccagatt
ctgaaggtccttcccacttcaaccgcctgctgcgagaaaggccgcaacgccctgcagcgg
ttacggaaaaacaaccgctccaggctgacactggatcaaacgagcgatctgctcaccata
gcagtgaacggtgcccccatcaccaatttcgacgccaagagagctctggacagttggttc
gaggagaaatcgggaaacagctactccttgtcggcggaaatgctaagcaagatgtcttcg
ctcgaccacaagccggtacttcaatccatggagcacggcacggagtattaccaagacatt
tga
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