Xenopus laevis (African clawed frog): 108713767
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Entry
108713767 CDS
T01010
Symbol
atg13.L
Name
(RefSeq) autophagy-related protein 13 isoform X2
KO
K08331
autophagy-related protein 13
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04136
Autophagy - other
xla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108713767 (atg13.L)
04136 Autophagy - other
108713767 (atg13.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108713767 (atg13.L)
03029 Mitochondrial biogenesis [BR:
xla03029
]
108713767 (atg13.L)
Membrane trafficking [BR:
xla04131
]
Autophagy
Autophagosome formation proteins
ULK complex
108713767 (atg13.L)
Atg1 complex
108713767 (atg13.L)
Mitochondrial biogenesis [BR:
xla03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
108713767 (atg13.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
108713767
NCBI-ProteinID:
XP_018112827
Xenbase:
XB-GENE-6486577
UniProt:
A0A1L8GIR3
A0A974HMQ8
LinkDB
All DBs
Position
4L:complement(8873599..8899168)
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AA seq
499 aa
AA seq
DB search
MDTDLSPQDRKDLDKFVKFFALKSVQVIVQARLGDKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALSGQLPAVGRSMCVEISLKTSEGDSMELEVWCLEMNEKCDRDIKVSYTVYNR
LSLLLKSLLAVTRVTPAYRLSRKQGHEYVILYRIYFGDVQLLGLKEGFQAVRIGTVGTPI
GTLTLTCAYRTNLAFMSTRQYEWTQPIMGIIIDHFVDRPFPSTSHMHPCNYRGAEEQVLT
YPAVEESQEFCATSFSTSPPSQLCSSRLSYQPAVPGAGPSELAYPVGLATGVSAAHPHQM
MAPGKESGLPAEHDRTLSVSPANVAGATSSSEEADSPSGSSATGTKSSPNKSPHILFTRK
VGAFVDKPSPQVTYASTDIPFAVFVPKLTDNEDTDPMVVYPETPEEESPEARSLHSSCSS
NGTPQDDFVMVDFRPAFSKDDLPMDVGTFYREFQNPPQLSSLSIDIAVQSMAEDLDSLPE
KLAMHEKNVKEFDAFVDSL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggacactgaccttagcccccaggaccggaaggatttggacaagtttgtcaaattcttt
gcactaaagagtgttcaggtgattgtacaagctcgactgggagataagatctgcacccgc
tcttcctcatctcctacaggctcagactggtttaacttggcaatcaaggatatcccggag
gtgacccatgaagcaaagaaagctctgtcagggcagctgcctgcagtgggacgttccatg
tgtgtggagatttcgctgaagacatccgagggtgattccatggagctggaagtctggtgt
ctggaaatgaatgaaaagtgcgaccgggacattaaggtctcttatactgtatataacaga
ttgtcgctgctgctgaagtcattacttgctgtcaccagagtgaccccggcttacagactc
tccaggaagcaaggacatgaatatgtcattctgtacaggatttactttggagacgttcaa
ctccttggtcttaaagaaggtttccaggctgtacgaattggaacggttggaacaccaatc
ggcacgctgacacttacctgtgcctacagaaccaacctggcttttatgtcaaccaggcag
tatgagtggacccagcccatcatggggattataattgatcactttgttgaccgacccttc
cccagcacctcacacatgcatccctgcaactacaggggcgctgaagagcaagtgcttacc
taccctgccgtggaggagtctcaagaattctgtgcaacatcgttttctacttcccctcct
tcacagctctgcagctctcgtctctcctatcaaccggcagtcccaggagcaggaccctcg
gaactggcttacccagtgggcttggctacgggagtgagtgcagcccacccgcaccagatg
atggcaccaggaaaagaaagtggtttgccagcagaacacgaccgaaccctttctgtgtct
cccgccaatgtagcaggggcaacgtccagcagtgaggaagcagattccccctcaggtagc
agcgccactgggacaaaaagttcgcccaacaagagcccacatatcctatttacaaggaag
gtgggagcttttgttgacaaaccttccccccaggtcacctatgccagtactgatataccg
tttgccgtgtttgtgccaaagctcacagataatgaggacactgaccctatggttgtctac
cctgagaccccagaagaggagtcgcctgaagccaggagcctgcacagttcctgttctagc
aatgggacaccccaagatgattttgtaatggttgactttagacctgccttctccaaagat
gaccttcccatggatgtggggaccttctaccgggagtttcagaatcctccgcagctaagc
agcttatccatagatattgccgtgcagtcaatggcggaggacttggactctctgccagag
aaactggccatgcatgaaaagaacgtgaaagagtttgatgcgtttgttgattctctgtag
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integrated database retrieval system
