KEGG   Xenopus laevis (African clawed frog): 108713786
Entry
108713786         CDS       T01010                                 
Symbol
ddb2.L
Name
(RefSeq) DNA damage-binding protein 2
  KO
K10140  DNA damage-binding protein 2
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03420  Nucleotide excision repair
xla04115  p53 signaling pathway
xla04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108713786 (ddb2.L)
  09124 Replication and repair
   03420 Nucleotide excision repair
    108713786 (ddb2.L)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    108713786 (ddb2.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xla04121]
    108713786 (ddb2.L)
   03400 DNA repair and recombination proteins [BR:xla03400]
    108713786 (ddb2.L)
Ubiquitin system [BR:xla04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     108713786 (ddb2.L)
DNA repair and recombination proteins [BR:xla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      108713786 (ddb2.L)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_RIG_2nd WDR55 Beta-prop_EIPR1 Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_EML EIF3I WD40_RFWD3 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 108713786
NCBI-ProteinID: XP_018112869
Xenbase: XB-GENE-17339696
UniProt: A0A1L8GIW4 A0A974D3U2
LinkDB
Position
4L:11542274..11554175
AA seq 489 aa
MPPKRATRGRRNLEEEEEQEDVSLGKRKRENVKNAEAGQKKPSKRRSGGQRGSALDTPCS
RKESDCGTNRGDKWTSIVHYLYRSTLGGNVGAKYLQTPFLQSLASYILYRTNSPFVRRVT
TLEWHPMHPNTVAVGSKGGDIILWDYEELNNTLIPGIGAGGCITGMKFDPFNPNQLYTSS
VAGSTVLQDFSGRNIQTFTNTEDWAMWYCSVDVSAGRQCVVTGDNVGNVVLLETCGKEIW
KLRLHKKKVTHVEFNPRCDWLLATASVDQTVKLWDLRNMKDKSSCLYTLPHARGVNSAYF
SPWDGAKLLTTDQHSEIRVYSACDWAKPQHIIPHPHRQFQHLTAIKATWHPRYDLIVVGR
YPDPLFPGYSSDELRTVDVFDGQKGNIVCQLYDPYASGIVSLNKFNPMGDLLASGMGFNI
LIWSREILLMMKQEEMMKALREKGLSVGRKDLPNSRLPHSREKPGNKVGATENSKTRTVK
DSTKRGKHK
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgccccccaaaagagcaacacgtggaaggaggaatcttgaggaggaagaggagcaggaa
gacgtgtctctaggaaaaaggaaacgggagaacgtgaaaaatgctgaagccgggcagaag
aaaccatcaaagaggagaagcggggggcagcgggggtctgcactagacacaccctgcagc
agaaaagagtctgactgtggaacaaacagaggggacaagtggacaagtatagtgcattat
ctgtatcgcagcactctggggggcaatgtcggagcaaagtacctgcaaaccccctttctc
cagtccctggcttcctacatattatatcggaccaacagcccctttgttcgtagggttacc
actctggagtggcaccctatgcacccaaataccgttgcagtgggatcgaaaggaggagac
atcatcctgtgggactatgaagaactcaataacacccttattcctgggattggagcagga
gggtgcatcaccggaatgaagttcgacccgtttaaccctaatcagttgtacacctcgtca
gtggcgggtagcacggtgctgcaggacttctctgggcgcaatatacaaacgttcaccaac
actgaggactgggcaatgtggtactgcagcgtcgacgtctctgctggaaggcagtgtgtg
gtcactggggataacgtcggcaatgtggtcctcctagagacctgtgggaaggagatttgg
aagttacggctgcacaagaagaaagtcacgcacgttgaattcaacccacgctgtgattgg
ctgctggcgaccgcttctgtggatcagaccgtgaagctgtgggacctgagaaacatgaaa
gacaagtccagctgtctgtacacattgccgcacgcacggggtgttaactctgcttatttt
agcccctgggatggagcaaagctactcactaccgatcagcacagcgagatccgtgtctac
tcagcatgtgattgggccaaaccgcagcacataatacctcatcctcacaggcaattccag
cacttgactgcaataaaggctacgtggcatccccgctatgatttaattgttgttggccga
taccccgacccgctctttccaggatattcgtcagatgagctgcggacagtagacgtgttt
gatgggcagaaagggaacatcgtgtgccagctctatgatccttatgcatctggtattgtt
tctctcaacaaatttaatccaatgggagatcttctggcttctggcatgggttttaatatc
ttgatctggagccgggagattctgttgatgatgaagcaggaggagatgatgaaggctctg
agggaaaagggactttcagtggggagaaaggaccttccgaattccagattgccacattcc
agagagaagccagggaataaagtcggtgcgacggagaacagtaagacacggactgtaaag
gactctactaagcgcgggaagcacaagtga

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