Xenopus laevis (African clawed frog): 108713947
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Entry
108713947 CDS
T01010
Symbol
bbs1.L
Name
(RefSeq) Bardet-Biedl syndrome 1 protein isoform X1
KO
K16746
Bardet-Biedl syndrome 1 protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xla03037
]
108713947 (bbs1.L)
Cilium and associated proteins [BR:
xla03037
]
Primary cilia and associated proteins
BBSome
108713947 (bbs1.L)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BBS1
GAE_BBS1
BBS2_Mid
PHTB1_N
Motif
Other DBs
NCBI-GeneID:
108713947
NCBI-ProteinID:
XP_018113187
Xenbase:
XB-GENE-6486187
UniProt:
A0A1L8GK24
A0A974D4P7
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Position
4L:complement(29459807..29479433)
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AA seq
588 aa
AA seq
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MSSSSDSSSREGESHSKWLDAHYDPVAGLGTFSSCIALADLHGDGDFKMVVGDMGHGPYN
MKLKVFKGTGQMSENALLDLPTGVVAFLMDQNEPRTPAIAVASGPFIYVYKNLRPYFKFT
LPAMEVNPLEKEVWDQAKEDKIDPVTLKEMLESIRDKAEIPLSVRSLRFMMLELQEMESF
VNTYKLQPLKRQTVITCMGTLKKNMADEDAVCCLVIGTESGELFILDPEAFTILTRVSLS
SVPTLLDVTGQYDIEYRITVACRNGNVYILRRDSKRPKYCIELSAQVVGLVRVQKNIMIG
TSQETLHGYSQKGKRLWTVTLPASIMTMALLEQKSRGIQAVLVGLKNLEVHLYRDKNLLS
VINTPDIVTGLCFGRYGREDDTLIMTTQGGGLLIKILKRTAQFEDKDTSPGPPTGQSIKL
NVPKKTKLYVDQTLRERENAVAMHRVFQMDLYRLRLSAARAYVKALDASLAPVSSTMQEP
LTLNAAVQGIGPQFKLILNLQNTSVNRPSMQLLISFLFDEKLYKLKPAFFKVPLLVPGLN
YPIDTSVECCSNKGISDIIKVFVLREGKSTPLLTAHINMPVSEGLVAA
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatcatctgacagcagcagccgagagggtgaatcacactcaaagtggttggat
gctcactatgaccctgttgctggacttggtacattttcctcttgcattgctcttgcagac
ttgcacggagatggagattttaaaatggttgtgggtgacatgggacatggcccttataat
atgaagttaaaggtgtttaaagggaccggacagatgtctgaaaatgctcttcttgacttg
cccactggtgtggttgctttcctgatggatcaaaacgaaccacgcaccccagccattgct
gtagcctcaggaccattcatttatgtgtacaagaatctgaggccatactttaaattcact
cttccagcaatggaggtcaatcctcttgagaaggaagtgtgggatcaggcgaaagaggac
aaaatagacccagtgacactgaaagagatgttggagagcatcagagataaggcagagatt
cctttatctgtacggtcactgcgatttatgatgttggaactgcaggagatggagtccttt
gtgaacacttataaactgcaacctctaaagcggcagactgtgatcacctgtatgggcaca
ctgaagaaaaatatggcagatgaggatgctgtgtgctgcctagtgattggtacagaaagt
ggagagttgttcattctggatccagaggcatttactattttgacacgggtcagcctttcc
agtgtgccaacacttcttgatgtaaccggacaatatgatattgagtatcgcattactgtt
gcctgtaggaatggcaatgtgtatatccttcgaagagactccaagaggccaaagtactgt
attgagctcagtgcacaagtggtaggtttggtgcgtgtgcagaaaaacatcatgattgga
acatcccaggagacattacatgggtactcccaaaagggtaagcgcctgtggacagtaacg
ctgcctgcatctattatgacaatggctttgctggagcagaaatcacgtggtattcaggct
gtgctggttggactgaaaaacctggaagttcatttatacagagacaagaaccttctaagc
gttataaataccccagacattgtgactggtctttgttttggccgctatggaagggaggat
gatactctaattatgaccacacaaggaggaggtcttctcattaagatcctaaagaggact
gcacagtttgaggacaaagatacctcgcctggccctcccacaggtcaaagcattaaactc
aatgtccccaagaaaactaaactctatgttgaccagacactgagagagagggaaaatgct
gtggcaatgcaccgcgtatttcagatggacttgtatcgcctgaggcttagtgctgccagg
gcatatgtaaaagcattagatgccagcttggctcctgtttcttcaacaatgcaggagcca
ttaactctgaatgcagctgtgcagggcattggtcctcagttcaaactgattctgaactta
cagaacacctcagtgaatcgtccttcaatgcagctacttataagcttcttgtttgatgaa
aagctttacaaactgaagccagcatttttcaaggttcctctgctggtcccaggattgaat
tatccaattgacacatctgttgaatgttgcagcaataaaggaatttctgacatcatcaag
gtttttgtgctgagggaaggaaagagtacaccactcctgactgctcatatcaacatgcca
gttagtgaggggctggttgctgcttga
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