Xenopus laevis (African clawed frog): 108714032
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Entry
108714032 CDS
T01010
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108714032
04091 Lectins [BR:
xla04091
]
108714032
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108714032
Lectins [BR:
xla04091
]
C-Type lectins
Others
108714032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
REJ
SUEL_Lectin
Ion_trans
Lectin_C
GPS
PKD
Abhydrolase_9_N
Motif
Other DBs
NCBI-GeneID:
108714032
NCBI-ProteinID:
XP_018113362
UniProt:
A0A8J0V592
LinkDB
All DBs
Position
4L:44999400..45062132
Genome browser
AA seq
2463 aa
AA seq
DB search
MMWLWVAVLCFLAPYSHADPSPCSKYQVPFNSSCYEFVTLERNFHSAQTWCERGGGHLVF
IDNQETQEFLGTYLSEDREWWIGLIYSPVNDFSQGFMTWLDTSNLTFTYWHNEDSPEPDR
KCGYIKKESGYHWSTTENCKQELFFICQFEFGHTISCENQNATLQCGSGEVIQISDSFYG
RRSPHFCTREEPSQTTSGCSWTNVKDLVAAQCHGLQACQITTDSSLFGAPCPSGSYLSID
YDCIEGLQIELPDKCLVGENITLMVNWLLSPYTGNLSCIISIDDGYSIDPYQPTNVSSNV
SHSFTFPGEFAVFVECSTSEWHVTAQKTITVEEHRAVLNVTGCYSKYESKNGVCSTYYGE
TLWIQVETSTGGEVNYTLLSNNIILNQSMAKREDLAYNLTLERAAQHLIGPGLHTLLIMA
SSNETPSITPSNITVHLIEPISGLQAELYNSILEVGTELKINMSIAYGAPVNLTFKIIGL
NETFSYTRENSSGEQNIYTIPVEAEGTYMVTVVAFNSFSNFSQNLGNITVLNSSYNIAGS
QDKNEGKNENITVLVKKTQAVRIEPGRYVNPFTSVVLHWPDSLSSNISWTCGSCWPGWFE
CVVQRVIDPVSEQILIPARCLPPPNTAFTVLAAVKVSEKEIFQDEQCLYMTAKSTLPIKI
RCKANCKEISLEEDVVLSTTCDNCDKATFNWYLDTNFPMMTLSPPDACHQRDFRQSYLVL
LQKDTSTLVLNSTFLKAQINTAFRIKLIAMNSQEYGEDTLVVSTVPPPEVPRCTVHPEEG
SVLSTFQISCRTHCAPTNSCIRNEHVNLTYCIYPKPNSQLYCGKDPELPSIFLPMGEKEN
DFILNLTVTVSNMYGASVNTTLKVKVRQDEINNNSLTLVSLVSEMSANILKGDSAGSSLI
QLYKSVSSVLNQIIPGDIATYSLQTEDKKELREVMLTALSAVNITSLHTALEMSEVLKDL
TTRNEELSASAQVEASNALKGLSESLLTVSNEADDTRKEAVQHLFNAVSNVLEATTLDGS
SMATEMTAQNAVSLHLLGAVENLQSALLMGKLPDNEPTILTAPSASMYINRMKPGHLEGT
SVNIKDPSTAAFTLPSLSSLSIPIGSEDAVDLRMVSFSVNPFSSSNTFDISGSVGGLSLT
SPDGSVIPVKDLTEHIEIILPRFSAPEDEKSILSLVNFTSLLINVTSSSNSLVVHLEPSE
EIPLVLYLGYEYHPNETNYDISTHLPSRAMYSGETIYSWVIGPEELLFGEGTYYLFVRSE
LEDLTPNDNLTIAVTCFSTQCMFWDEANQDWNNTGCHVGPKTTPSSTQCLCTHLTFFGSS
FIVMPNAIDVSRTVELFATFVDNPVVVTTVGCIAVVYILVMIWARRKDIQDNSKLKIIAL
EDNDPFAQYRYLVTIFTGHRRGAATTSKVTITLYGFDGESDPHHLSDPEGTVFERGSEDV
FLLTTLFPLGEVQSIRLWHDNSGDKPSWYVNRVLVHDMELDQKWYFLCNSWLSIEVGDCV
LDKVFSVATEEDMKQFSNLFFMKTSKGFRDSHIWYSVFSRSPRSSFTRVQRVSCCFSLLL
CTMLTSIMFWGVPTDPAEQKMDMGKIEFTWQEVMIGFESSLLMFPINLLIVQIFRNIRPK
LAKKPAEKKERSFRSDAIKKSPSSQDITTASLTPEAVMKDIRRIASSLFKTQKIPLPDVD
LRKSTDINKLLSLVEDIIRQQNRAGQEFYDDSKKETSLILSMGSVDWQEELRSPTPEKSM
REKPRRSDQNRYLYLQLQHVEKKLEFLGPYQFQNPQSYSRAVSQVQHMKGILENQLCSSS
AASEVCSSSVSLSEDGKKNTSRGLPWWFVFIGWLLVAATSGVSAFFTMLYGLHYGKDSSI
KWLISMAISFFESLFITQPLKVLGFAAFFALVLKKVEPEDEEQATINGDLSTPGDPNPLL
GSRRDSNIYQPPPPTDITKMKNNHIKEQKVFALIREILAYLGFLWMLLLVAYGQRDPNSY
YLNKHIENSFTGGLEDLCSYQEFFTWANTTLINNLYGSHQGFVTDGNSKLVGGARMRQIR
IKKDSCPVAPVLQSTIDNCRAPYSLDAEDMGHYDGSWNFSTFTNASDVNSPWYYQNHSKL
RSHPTWGKMATYRGGGYVADLGNNRTHAHRVLQDLFSNIWLDSYTRAVFVEFTVYNANVN
LFCIVILMFETDALGTFFTRANLQSVRLHPFTDGLHIFVVAAEVIYFLFVIYYMVVQGKR
MKAEKWGYFRSKWNLLELALIIISWSALSVFVKRTILGTRDLHYYQEHKNEFVSFNETAA
ADAALGYLIAFLVLLSTIKLWHLLRLNPKLNMITATLRRAWGDISGFITVMFIMFLAYSI
ACNLIFGWKLNSYKTVFDSAKTMVSLQLGIFNYEEVLDYNPVLGSFLVGSCIIFMTFVVL
NLFISVILVAFSEEQKYHQASEEEEIVELLLMKIYSFLGLRHKKEEEGAMGNVPKASLID
QNK
NT seq
7392 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggctctgggtagcagttttgtgtttccttgctccatatagccatgcagacccc
agtccttgctcaaagtaccaagtcccttttaacagttcatgttatgaatttgtcacactt
gagcgcaactttcacagtgctcagacttggtgtgaaagaggtggggggcacctggtgttc
atcgataaccaagaaacgcaggaatttttaggaacctatttatctgaagatcgagaatgg
tggattggacttatttacagccctgttaatgacttcagtcaaggatttatgacctggctg
gacacatccaatttaacttttacatactggcataatgaagattcccctgagcctgacaga
aaatgtggttacataaaaaaggagagtggttatcactggagcactactgagaattgcaaa
caagaattatttttcatctgtcagtttgagtttggtcatacaatatcctgtgaaaatcaa
aatgcaacgttgcagtgtggctcaggggaagttatccagataagtgacagtttctatggc
cgcaggagcccccatttttgtactcgggaagagccctcacagaccacaagtggctgcagc
tggacaaatgtgaaggaccttgtggcagctcaatgtcatggacttcaggcctgtcagatt
acaactgattcttccctatttggagcaccttgtccatctggcagttatttatctattgat
tacgactgtatagaaggcttgcagattgaattgccagataaatgcctagtgggtgaaaat
ataactcttatggtgaattggctcctgtcaccttatactgggaatctctcttgtataata
agcattgatgatggatattcaattgatccctaccagcccacaaacgtgtccagtaatgta
agtcacagcttcacatttcctggggaatttgctgtgtttgtggaatgctcaactagtgaa
tggcatgtgacagctcagaagaccatcaccgtagaggaacacagagctgttctcaatgtt
actggctgttacagcaagtatgaatccaaaaatggggtctgtagtacatattatggggag
actctgtggattcaagtagaaacaagcacaggtggagaagtcaactacactcttttatcc
aacaacataatactgaatcagtccatggcaaagagagaagatcttgcttacaatctaact
ctagagagagctgctcagcaccttattgggccaggattgcacacattgctgatcatggct
tccagtaatgagacaccatccatcacacccagcaacattactgtccatctaatagaaccc
atttctggtttgcaggctgaattatacaattccattttggaagtgggtacagagctgaag
ataaatatgtccattgcttatggagcaccagtaaacctaacgtttaaaatcataggttta
aatgaaaccttcagctacacaagggagaattcatcaggagaacaaaatatctacactatt
ccagttgaagcagaaggtacttacatggttacagttgtagctttcaattccttctctaac
ttcagccagaatcttggaaatattacagttttaaacagctcctataacattgcaggaagc
caagacaaaaatgaaggaaaaaatgaaaatattacggtccttgtgaagaaaacgcaggct
gttcgaatagaaccagggagatatgtgaatcccttcactagtgttgtcttacattggcct
gacagtttgagctccaatatcagctggacttgtgggtcttgttggccaggatggttcgag
tgtgtggtgcagagagtgattgaccctgtatcagaacaaatccttatccctgcccgttgt
cttcctcctcccaacactgccttcactgtattggctgctgtcaaagtcagtgaaaaggaa
atattccaagatgagcagtgcttatacatgaccgcaaaatccactcttcccatcaaaatc
agatgcaaagcaaactgcaaagagataagcctggaagaggacgtggtgctcagtacgact
tgtgacaactgtgataaggcaacattcaactggtatcttgatactaacttcccaatgatg
acactttcaccccctgatgcctgccaccaacgtgatttcagacaaagttacttggtacta
ttacaaaaggacacttctacattggtactgaacagcacctttcttaaggcccaaatcaat
acagccttcagaattaagcttatagcaatgaattcacaagaatatggagaagatacattg
gttgtaagtactgtgcctcctccagaggtacccagatgcactgtacatcctgaggaaggg
tcagtactgagcactttccaaatctcctgtcgtactcactgtgctcctacaaattcttgc
atcagaaatgagcacgtcaacctcacttactgcatctaccccaagcccaactcacagctc
tactgtggcaaagatcctgagctgccatcaatttttctgccaatgggagagaaagaaaat
gactttattttaaatcttaccgttactgtaagtaacatgtatggtgcttcagtaaacaca
actctgaaggttaaggtcagacaagacgagataaacaataacagcctgaccctggtgtct
ttggtatctgagatgtcggcaaacattttaaagggagacagtgctggatcctctctgatc
cagctttataaatctgtatcttctgtcttaaaccagatcattcctggggatattgccact
tattcactgcagacagaagacaagaaagagttacgagaagtgatgcttacagcgctctct
gctgtcaatatcacatccttgcacacagcccttgagatgtccgaggtgctgaaagacctg
acaacaaggaacgaggagctctctgcttctgcccaggtggaagctagcaatgctctgaaa
ggtctcagtgagtccttactgactgtgagcaatgaagcagacgacactaggaaggaggca
gtacaacacctattcaatgctgtgagcaatgtattggaagccacaacactagatggcagc
agcatggccaccgagatgactgcacagaatgcagtgtctctccacttactgggtgcagtg
gaaaacttacaaagcgctctactaatgggtaaactgccagataatgagcctaccatcctg
actgcaccctcagcttcaatgtacataaacaggatgaaacctggtcacttggagggaact
tctgtgaatattaaggaccccagcacagctgcctttaccctaccttctctctcctctctc
agcatccctataggaagcgaagatgctgtcgatctacggatggtgagtttctcagtcaat
cctttctcctcaagtaacacttttgacatcagtggatctgtaggaggcctaagtctcacc
agtccagatggctcagtcatccctgttaaggacctcactgagcacatagagatcatttta
ccaagattttctgcacctgaagatgagaagagcatattaagtctggtgaattttacatct
cttctcataaatgtgacttcttccagtaattcccttgtggttcatttagaacccagtgaa
gaaatccccttggtgctctacttggggtatgaatatcatcctaatgaaacaaattatgac
atcagtacccatctgccaagcagagcaatgtacagtggagaaactatatattcttgggta
attggcccagaggagctgcttttcggggagggaacctactacttgtttgtgagatcggag
cttgaagacttgaccccaaatgacaacttgaccatagctgtcacttgttttagtactcag
tgtatgttctgggatgaggctaatcaggactggaataatactggctgtcatgttgggccc
aaaaccactcctagcagcactcaatgcctttgcactcacctcaccttttttggaagttcc
tttatagtgatgcctaatgcaattgacgtcagcagaacagtggaactctttgctactttt
gtggataaccctgtggtggtgaccacggttggctgtatagctgttgtttatatcttagtg
atgatctgggccagaagaaaagatattcaagacaattcaaagctgaaaattatagcttta
gaagacaatgacccatttgcccagtatcgttaccttgtcactatttttactggtcatcgg
agaggagctgcaacaacatcaaaggtaactatcacgttatatggttttgatggggagagt
gatcctcaccatctttctgatccagaaggaactgtgttcgagaggggaagcgaagatgtt
ttcttactcacaacacttttccccctaggagaagtgcagagcatcagactttggcatgat
aactccggggacaaaccgtcttggtatgtaaacagagtgttggtccatgatatggaatta
gaccagaaatggtatttcctgtgtaactcttggctgtctatagaagttggagactgtgta
cttgataaagtcttcagtgttgcaacagaggaggatatgaaacaattcagcaatctattt
tttatgaagacttcgaaaggatttagggatagccatatttggtactctgtcttcagtcgt
tctcccagaagctcttttacccgagtacagagagtgtcctgttgcttctctttgcttctt
tgcaccatgctgaccagtattatgttctggggagtacccactgatccagctgaacagaaa
atggacatgggtaagattgaattcacttggcaggaagtgatgattggatttgaaagctcc
ctcctcatgtttcccatcaacctcctgatagttcagatattcagaaatattcggccaaag
ctagctaagaaaccagcggaaaaaaaggaaagaagctttaggtctgatgctattaaaaag
tctccttcctcccaagatatcaccactgcctctctcaccccagaggctgtgatgaaggat
atcagaagaattgcaagttccctgtttaaaacccagaaaataccccttccagatgtggat
cttaggaaatcgaccgatataaacaaactcttgtcactagtagaagatataattcgccaa
caaaacagagctggacaagagttctatgatgacagcaaaaaagagacatcccttatactc
agcatggggtctgtagactggcaagaggaattaaggagcccaacaccagaaaagagcatg
agagaaaagccaaggcgcagtgatcagaaccgttacttgtacctacagctgcagcatgta
gagaagaagctggaattccttggaccctatcagtttcagaatcctcagagttacagccgt
gctgtttcccaagtgcagcatatgaaaggaatcctggagaatcagctatgttcatcaagt
gctgctagtgaagtatgttcatcatcagtcagtctttctgaggatggaaagaagaataca
tcaagagggctaccttggtggtttgtttttataggttggctccttgtggctgccaccagt
ggtgtatctgcattcttcactatgttgtatgggctacattatggaaaagacagctcaatc
aagtggctcatctcaatggcaatttcattttttgagagtctcttcatcacccagccttta
aaggtgttgggatttgctgcattttttgccttagttctaaagaaagtagaaccagaagat
gaagaacaggccactattaatggagacctgtctaccccaggtgacccaaatcctctacta
ggttctcgcagagacagcaacatctaccagcctcctcctcctacagatatcaccaagatg
aagaacaatcatataaaagagcaaaaagtgtttgccttaattcgagaaatattggcctac
ctggggttcctgtggatgctcttgctagtggcctatggacagagggacccaaattcctat
tacctcaataaacacattgaaaacagttttacaggtggcttggaagatttgtgcagctac
caagaattctttacatgggcaaacacaactcttatcaacaatttatatggaagccatcaa
ggatttgtaactgatggcaattctaagcttgttggtggcgccagaatgcgtcagatcagg
atcaagaaggattcttgtccagtagctcctgtactgcagagcacaattgataactgtcga
gcaccatactctctggatgctgaggatatgggccactatgatgggagttggaatttctcc
actttcaccaatgcaagtgatgtaaactcaccatggtattatcaaaaccattccaaactc
cggtcccacccaacatggggaaaaatggcaacatatagaggaggtggctatgtggcagat
ttaggaaataaccggacacatgcacacagggttctgcaggatctattcagtaatatctgg
ctggactcttacactcgagctgtctttgtggaattcactgtttataacgccaacgtgaat
ctcttttgcattgtcatacttatgttcgaaacagatgcgttaggaacctttttcactcgt
gcaaatcttcaaagtgtccgtcttcatcccttcactgatgggctgcatatctttgtcgta
gcagcggaagtgatttatttcctttttgtcatttactacatggttgtgcaggggaagcgc
atgaaggcagagaaatggggttacttcaggagcaagtggaacctgctggaattggcgctg
attattatcagttggagtgccctctctgtgtttgtgaaaagaacaatacttgggacaaga
gatctacactattatcaagagcacaaaaatgagtttgtgagttttaatgaaacagcagct
gcggatgccgccttgggctatctgattgcctttttagtgctgttatcaaccattaagttg
tggcatctcttgagactgaacccaaaactcaatatgattacagctactctccgcagggcc
tggggagacatatctggattcattaccgtcatgttcataatgttcctggcctattctata
gcttgcaacttgatatttggctggaagcttaactcttataaaacagtttttgattcagcc
aagacaatggtcagccttcagctgggtatctttaactatgaagaggtattggactacaat
ccagtattgggctcgttcctagttggatcatgtatcatatttatgacatttgttgtactg
aatttgttcatttcagtcatccttgtagcattcagtgaagaacagaagtatcaccaggca
tcagaagaggaggagatcgttgaactcttgctaatgaagatctacagttttcttggtctc
aggcataaaaaggaagaagaaggtgccatgggaaatgttccaaaggcctctctcatagac
cagaacaaatga
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integrated database retrieval system
