Xenopus laevis (African clawed frog): 108714050
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Entry
108714050 CDS
T01010
Symbol
cdh5.L
Name
(RefSeq) cadherin-5 isoform X1
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04514
Cell adhesion molecules
xla04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108714050 (cdh5.L)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108714050 (cdh5.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
108714050 (cdh5.L)
04090 CD molecules [BR:
xla04090
]
108714050 (cdh5.L)
Cell adhesion molecules [BR:
xla04515
]
Cadherins
Major cadherins
108714050 (cdh5.L)
CD molecules [BR:
xla04090
]
Proteins
108714050 (cdh5.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_pro
Cadherin_2
Ig_NUP210_4th
TMEM154
DUF1189
DUF3377
Motif
Other DBs
NCBI-GeneID:
108714050
NCBI-ProteinID:
XP_018113383
Xenbase:
XB-GENE-17335523
UniProt:
A0A8J0V5A8
LinkDB
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Position
4L:50784561..50836584
Genome browser
AA seq
797 aa
AA seq
DB search
MNTKVESKKNHGGYQLIAGAPTMKVQRLQFLIIMCCSLPLLLFSKEITNSETPPHKNSRR
VKRGWIWNQMFISEEQKTGNLPHYVGKLQLNSSSLHENAKFAIQGEFANTIFRVNERNGD
IYCFERLDREKKSEYHLMALLVDKRTNKTMEHPSNFVIKVIDINDNAPEFTQKAFNGSVN
EMSDRGIFVTKVNAVDKDDPTIGGNADVTYRIIQGQEYFTIDNSGTIYTAIPNLDREQKD
TYEVVVEARDSPGQTIYLANTATVTIHLTDINDNFPTFTESEFKFNVPENLKVGGEVGRL
KVEDIDEPQNRNTKYSFLKERFQEMFAVTTNAITNEGILILKKPLDYESAKQYKMDIEAT
DPLIDLRVAKQPRPKSITNIIINVLDVDEPPVFSKPFYKFEISEDSKLNNIIGFVSAKDP
DAANRNIRYSMRSFKDEPIKVTNNGNIISVKMLDRETVDWHNFTVVAEEVDPSNPPIKKE
SLGLVFIKVLDVNDNAPEFADRYAPRVCENAAHQTVITNISATDKDEMKPGMKFTYYSAK
KENNFTVQDNHDNTATILVKYGYFNREVAKFHYLPIVISDNGQPEQSSTNTLTITVCKCN
EKGEFTFCEESAKLAAVSVPMIVIILVSLFLIILVVTILAVLRRMQTKHTNILGKNTAEI
HEQLVTYDEEGGGEMDTNSYDVSVLNSVRRNVQRPRQEMEASPYLYAHVQKPARNGDMSF
MIEVKKDEADNDGEGLPYDTLHIFGYEGSESIVESLSSIESGSSESDIDYDVLNNWGPRF
KMLADLYGLEQIEDFPY
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaaggtggagagtaagaaaaaccatggtggttaccagctaattgctggtgcg
cctacgatgaaggtgcaaaggcttcaatttctgatcataatgtgttgctctttgcctttg
ctcctattcagcaaagagatcacaaattctgaaacacctccacacaaaaacagcaggcgt
gtcaagagaggatggatatggaatcaaatgtttatttcagaggaacaaaaaactggaaac
cttccgcattatgtgggaaagttacagctcaattccagcagtttacacgaaaatgccaaa
tttgccatccaaggggagtttgccaacacaatttttagggttaatgagagaaatggtgat
atctactgctttgaaagactagaccgtgagaagaagtcggaatatcacttgatggctcta
ctggtggacaaaagaacaaacaaaactatggagcatccttccaactttgttatcaaagtt
attgatataaatgacaatgcaccagaatttacacagaaagctttcaatggatctgtgaac
gagatgtcagacagaggtatttttgtgacaaaagtcaacgctgtggataaagatgatcct
acaataggtggaaatgcagatgtaacctacagaataatccaaggacaagagtactttaca
attgataacagtgggacaatttatactgcaatacctaatttagacagagagcagaaagat
acctatgaagttgtggtggaggccagagattccccaggacaaaccatttacctggcaaac
acagccacagtaaccatccacttgacagacattaatgacaattttccaaccttcactgag
agtgagtttaagttcaatgttccagaaaacctgaaggttgggggagaagtgggaagactg
aaagtagaagatattgacgagcctcaaaacagaaacacaaagtatagtttcttgaaggaa
aggttccaggagatgtttgctgttaccacaaatgcgatcactaatgaaggaattttgata
ttaaaaaagcccctggactacgagagtgctaaacagtataagatggacattgaagccaca
gacccccttatcgacttacgtgtggcaaaacagcctagacccaagagcattacaaatatc
atcattaatgtccttgatgtggatgagcccccagtgttctccaaaccattctacaaattt
gaaatttcagaggattctaaattaaataatatcattggatttgtctcagcaaaagatcct
gatgctgccaacagaaacatcagatattctatgagaagtttcaaagatgaaccaatcaag
gtaacaaacaatggaaatataatcagtgtcaagatgcttgacagagagactgtggattgg
cacaattttactgtagtagctgaggaagttgacccaagtaaccctcctattaaaaaagag
tcattgggacttgtttttataaaagtgcttgacgtaaatgacaatgctccagaatttgcg
gatcgatatgcacccagagtgtgtgaaaatgcagcccaccaaacggtcataacaaacatt
tctgctactgataaggatgaaatgaagcccggaatgaagtttacatattattcggctaaa
aaagaaaacaatttcacagtgcaagataatcatgacaacacagctaccatcctggtcaaa
tatggatactttaatagagaagtggcaaagtttcattatctacctattgtgatctcggac
aatggacagccagagcagagcagcaccaatacccttacaattactgtgtgcaaatgcaat
gaaaaaggagaattcacattctgtgaggagtctgcaaagctggctgcagtttctgttcca
atgattgtcataatacttgtgtctttatttttaattattttggttgtcacaatattggca
gtcctaaggagaatgcagacgaaacataccaacatcttagggaaaaacacagcggagatt
cacgagcagctggtcacttatgacgaggaaggtggaggagaaatggatacaaacagttat
gatgtatctgtattgaattctgtgcgcagaaatgttcaaaggcccaggcaagaaatggaa
gcaagtccctacctgtatgcccatgtccaaaaaccagcaagaaatggagacatgtctttc
atgattgaagtgaagaaggatgaagcagacaatgatggggagggattaccatatgacacc
cttcacatatttgggtatgaagggtcagaatctattgtggagtcactcagctccatagaa
tctgggtcttcagaatcagatatagactatgatgtattgaataattggggacctagattt
aagatgctagctgatctttatggtctggaacaaattgaagactttccttattag
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