KEGG   Xenopus laevis (African clawed frog): 108714148
Entry
108714148         CDS       T01010                                 
Symbol
exosc6.L
Name
(RefSeq) exosome complex component MTR3
  KO
K12587  exosome complex component MTR3
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108714148 (exosc6.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    108714148 (exosc6.L)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     108714148 (exosc6.L)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 108714148
NCBI-ProteinID: XP_018113562
Xenbase: XB-GENE-6485762
UniProt: A0A1L8GLH9 A0A974HP39
LinkDB
Position
4L:69328141..69330876
AA seq 268 aa
MPGDSRRIRGPEESQSPLLYAPSEEGRKAAGRSGRGLSEPRAVFVRAGLLSQAKGSAYLE
AGTRGTKVLCAVHGPRERGMGAERAEPRGRLVCELRWAPFSRRGPWSGSSPAGPSPRQAG
LLLQESLEPAVRLDRYPRAEVIVWLLVLEDRGSALPAAVSCASLALADAGIEMFDLALGC
GLSRGPGGELLLDPDDEEEEAGSGGTMSLSLLPTLNQVSGLISSGEWEGESSVEAVRLCM
EGCQRLYPVLHQCLVKATKRNIPEPDTK
NT seq 807 nt   +upstreamnt  +downstreamnt
atgccgggagacagccgccgtattcgtggccctgaagagtcccagtcccctttgctctat
gcacccagtgaagaaggcaggaaggcggcagggagaagcggccgcggtctatcagagccc
cgcgcggtttttgtacgggccggcctcctgagccaagctaaaggatccgcctacctagag
gccggcactcgcggtaccaaagtgttgtgtgcggttcacgggccgcgggagcgagggatg
ggagcggagagagcggagccccggggtcgcctggtctgtgagttgcgctgggctcccttc
tcccgccgcggaccctggtctggctctagtcccgctgggccctccccccgccaggccgga
ctgttgctgcaggaaagtctggaaccggccgtgcgattggatcgctatccgcgagcggag
gtgattgtgtggctgctggtgctggaggatcgcggttctgcgctgcccgcggccgtgtcc
tgtgcctcgttggctttggccgatgccggaattgagatgtttgacttggcgctcggatgt
ggcctgagccgcggccctggaggggaacttctactcgatcctgatgatgaggaagaggag
gctggcagtggcggcaccatgagtctgagtctcctgccaacactcaatcaggtttctggc
cttatcagcagtggagagtgggaaggagaaagctcagtggaagcggttagactgtgcatg
gaaggctgccagagattgtacccggttttgcaccagtgcttggtaaaagccactaaaagg
aacataccagagcctgacacaaagtga

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