Xenopus laevis (African clawed frog): 108714148
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Entry
108714148 CDS
T01010
Symbol
exosc6.L
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108714148 (exosc6.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
108714148 (exosc6.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108714148 (exosc6.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
108714148
NCBI-ProteinID:
XP_018113562
Xenbase:
XB-GENE-6485762
UniProt:
A0A1L8GLH9
A0A974HP39
LinkDB
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Position
4L:69328141..69330876
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AA seq
268 aa
AA seq
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MPGDSRRIRGPEESQSPLLYAPSEEGRKAAGRSGRGLSEPRAVFVRAGLLSQAKGSAYLE
AGTRGTKVLCAVHGPRERGMGAERAEPRGRLVCELRWAPFSRRGPWSGSSPAGPSPRQAG
LLLQESLEPAVRLDRYPRAEVIVWLLVLEDRGSALPAAVSCASLALADAGIEMFDLALGC
GLSRGPGGELLLDPDDEEEEAGSGGTMSLSLLPTLNQVSGLISSGEWEGESSVEAVRLCM
EGCQRLYPVLHQCLVKATKRNIPEPDTK
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgccgggagacagccgccgtattcgtggccctgaagagtcccagtcccctttgctctat
gcacccagtgaagaaggcaggaaggcggcagggagaagcggccgcggtctatcagagccc
cgcgcggtttttgtacgggccggcctcctgagccaagctaaaggatccgcctacctagag
gccggcactcgcggtaccaaagtgttgtgtgcggttcacgggccgcgggagcgagggatg
ggagcggagagagcggagccccggggtcgcctggtctgtgagttgcgctgggctcccttc
tcccgccgcggaccctggtctggctctagtcccgctgggccctccccccgccaggccgga
ctgttgctgcaggaaagtctggaaccggccgtgcgattggatcgctatccgcgagcggag
gtgattgtgtggctgctggtgctggaggatcgcggttctgcgctgcccgcggccgtgtcc
tgtgcctcgttggctttggccgatgccggaattgagatgtttgacttggcgctcggatgt
ggcctgagccgcggccctggaggggaacttctactcgatcctgatgatgaggaagaggag
gctggcagtggcggcaccatgagtctgagtctcctgccaacactcaatcaggtttctggc
cttatcagcagtggagagtgggaaggagaaagctcagtggaagcggttagactgtgcatg
gaaggctgccagagattgtacccggttttgcaccagtgcttggtaaaagccactaaaagg
aacataccagagcctgacacaaagtga
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