Xenopus laevis (African clawed frog): 108714230
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Entry
108714230 CDS
T01010
Symbol
atg4c.L
Name
(RefSeq) cysteine protease ATG4C-like isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04136
Autophagy - other
xla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108714230 (atg4c.L)
04136 Autophagy - other
108714230 (atg4c.L)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xla01002
]
108714230 (atg4c.L)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108714230 (atg4c.L)
03029 Mitochondrial biogenesis [BR:
xla03029
]
108714230 (atg4c.L)
Peptidases and inhibitors [BR:
xla01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
108714230 (atg4c.L)
Membrane trafficking [BR:
xla04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
108714230 (atg4c.L)
Mitochondrial biogenesis [BR:
xla03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
108714230 (atg4c.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
108714230
NCBI-ProteinID:
XP_018113732
Xenbase:
XB-GENE-17333280
UniProt:
A0A1L8GLW8
A0A974HNP8
LinkDB
All DBs
Position
4L:complement(80094360..80118529)
Genome browser
AA seq
447 aa
AA seq
DB search
MEASGTDDVEKLKSKFLSAWHNMKYSWVLKTKTYFKRNSPVFLLGKCYHFKYEDSSVTAN
GPSNSGSESNEDLSGNVDEFRKDFISRIWLTYREEFPQIEASTWTTDCGWGCTLRTGQML
LAQGLLVHFLGRDWTWTEALDIFCSESDFWTANTARKLDPSLEKSSPQNEESSKQPLHNS
DEKSHSEDLHRKIISWFADYPLSYFGLHQLVKLGKNSGKAAGDWYGPAVVSHLLRKAIEE
SSDPELHGITIYVAQDCTIYNADVYDLQCNKGDEKAVVILVPVRLGGERTNMEYFEFVKG
ILSLEFCIGIIGGKPKQSYYFVGFQDDSLIYMDPHYCQSFVDVSIKNFPLESFHCPSPKK
MSFKKMDPSCTVGFYCRNVREFEKAAEELTKVLKSSTKQNYPLFTFVNGHAQDFDFVCTP
VYDQNDLFTEDEKKRLKRFSTEEFVLL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggaagccagtggcacagatgatgtggagaaattaaaatccaagttcttatctgcatgg
cataacatgaaatatagttgggtactgaaaacaaaaacctacttcaagagaaattcacca
gtgtttttacttggaaaatgctaccattttaaatatgaagattctagtgtaacagccaat
ggtccttccaattctggctctgaatcaaatgaagacctttctggaaatgtggatgagttt
cggaaggatttcatttccagaatatggcttacttatagagaggaattcccccaaatagaa
gcatcaacatggacaacagattgtggatggggctgcacattacgtactggtcaaatgctg
ctggcacagggattgctagtacacttcctgggaagagactggacttggacagaggcactg
gacattttttgttctgaatcagacttttggacagcaaacactgcaaggaaacttgatcca
tctcttgaaaaatcttcccctcaaaatgaagaatcaagcaagcaaccattgcacaacagt
gatgagaaaagtcattctgaggacttgcacagaaaaataatatcttggtttgcagactac
ccactttcctattttggtttacatcaacttgtgaagcttgggaaaaattcaggcaaagca
gctggagactggtacggtccggcagttgtttctcaccttttgaggaaggcgattgaagag
agctcagatccagaactgcacggaataacaatttatgttgctcaagactgcactatttac
aatgctgatgtctatgacctgcagtgtaataagggtgatgagaaggctgttgtaattcta
gttcctgtgagacttggtggtgaaaggaccaacatggagtattttgagtttgtaaaggga
attctaagccttgaattctgcattggaattattggtggcaaacccaagcagtcctattac
tttgtggggtttcaagatgacagtttgatttacatggatcctcattactgccaatctttt
gttgatgtcagcataaagaatttccctcttgagtctttccattgcccttctcctaagaag
atgtctttcaagaaaatggatcccagttgcacagttggattttactgtaggaatgttcga
gagtttgaaaaggcagcagaggaacttacaaaggtgctgaaatcttcaaccaagcagaat
tatcctttatttacctttgtaaatggacatgctcaagactttgattttgtctgtactcca
gtctacgatcaaaatgaccttttcacagaggatgaaaagaaaagattaaaaagatttagc
acagaggagtttgtcttgctttaa
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