Xenopus laevis (African clawed frog): 108714238
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Entry
108714238 CDS
T01010
Symbol
frem1l.L
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108714238 (frem1l.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
xla04091
]
108714238 (frem1l.L)
Lectins [BR:
xla04091
]
C-Type lectins
Lecticans
108714238 (frem1l.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Big_9
Calx-beta
Motif
Other DBs
NCBI-GeneID:
108714238
NCBI-ProteinID:
XP_018113757
Xenbase:
XB-GENE-17337898
UniProt:
A0A1L8GLZ7
A0A974D498
LinkDB
All DBs
Position
4L:80988164..81088711
Genome browser
AA seq
2137 aa
AA seq
DB search
MDTSGYFLKILVLLYMPLYGFVKASTLIVRNTGIKVGRGQNIYISENELLFSIPHNKDTC
KVEVVLSEPTTQVVGRLSPQVFDCHFLPEEVKYSHNGSPMLTEDSVMIRVYRFSELETIV
EIVLIKIQITDSVGGIVHLGPDSLEVPEFYGVSTKPVDKNILTFKPTWDKLGTSCVVRTL
LSELLLPAHGQVVIEDTRGAGTPVRGPSLTHRVRNYRQESMPCPGNKACNTGLKEMRLLK
ANCKDFMEMGIKYQHLSPPSPNIDYIPLQVELQGGENRKQLQTQNIWIPVVIAGAIPNTP
PRAAFMPMFILEVDQFILTTITTATVDAEDDETPKNKLVFKISKPPTAGYITHADDHTKA
VTSFTWQDLHDMNIAYQPPCTPHNERQNYEVEFQAIDSFFLVSAPITVHISIRTSETNAP
RVAWNMGLNLLEGQSRPISWDVFQIVDNDNLHAVRLVTVDGLLHGRLTVRGVKAFIFTVK
DIKDKVVRYHHDDSDTTKDYIVFRIFDGKHSIRHKFPINILPKDDSPPFLVNNIGFELVE
GATILIEGHMLMASDLDSSDDYILYNITKPQKAGELVKKYSTESSGIPVSTFLQRDLFRG
LIYYKHFGGEIFQDSFEFVLSDSHDPPNYSEEQIVTIHITPVKDQLPKEAEGTRRHLIVK
ETEITRITKEHLHFVDTESPDNHLIYTVTKTCYAPEYPGLLDAGRLIFVDTTDKLEKDSS
NPTLNFFSQHAVTHLKVAYMPPQREIGPDPILVQFVFSVSDQHGGQLSGLTFNITVMPVD
EKTPEIFTNAIKTEEGSSCFITGENLQITDVDTKMENLNIVLKTRPLHGRVEVHGVTMSE
GDVFTVEELTAFKVRYQHDDSESFEDTVSFTVTDGYNTADGVLKVQIIPVNDEPPELKEG
LKADLKCQEGSSVTITSENLYAIDPDSEDTKLTYIIARIPMFGIIQRGGIIVEKFTQLDI
TQGLISYIHTGGEIGPSPCLDTVTLIVSDGEAGAAGTCCSADSLPPPVPLHSSLPVYDLN
ITVMPINNQQPVLNIGEIFAVYEGSSSVINLNYLNASDTDTTLEELYFIMETQPKYGYLE
NTVPMDGSEKPSSNKNISFFSLWNVSSGYIRYVQSEHEHKEPTADVFKVSVSDGVQRSMP
MPFYILIKPTNDEMPQLHVRNITIIEGGICEIGPGTLNAEDLDIPPDTLQFSIVISPSHG
LILNGEYGRNISQLKHLSPIALHKDLQIYSFTLDELKQGMELVYLHDDTDTLHDSFAIQL
TDGKHTVQETLHIYIMPVNDEKPHLIRNAGLEVEVAENKLISSVVLEAEDKDSPRNGIQY
IINNAPTFGDLKMKVTSTWITLYPGMNFTQEDVDMNHVWYFHTVILGCKGHDSFRFMITD
GEHTSASEIFYISVQNLEKGDIILFTRPITLTEGDRVTLMTDVLMATDGTGQPEKLLYAI
SVPPVHGQIEYINYPGVPISSFSQLDVAAQKVCYVHDNSHDTSKDLFSFTVSNGLTAKDG
FLEFVIIQTDRIPPSLVNNKAINILERAIVVISSNYLQLIDPDSPLDKLTYTVTEYPHHG
QLYLKGNPLQQSHFSQTDINNMHLSYRHYGGAAELDRFLFVGTDNTNQGFLVDGQMRKSA
VAFIIQIEHLDNLPPKLLIKESPSIVENTKDGRAMIHITARNLKATDSDSKDEDLKFVIL
RSPYFGHLENAKTGGFVGTIFTQREINQRAIRYIINPSVEVNSDSFEFKISDPAGNEILS
ETFELKWSVIQLSQLHYRTCENVGTFGVKLIRTGSSKDPAFVGIKVDEVSARAGLDFTHS
SASLVQFDPGVSTKQWNIHIKNDGLEENHEVLKIVLKTPKNAVLGKIHEATIEIIDLRAG
QCSLQDSKSSGVTWNSENTGLSNRQLSRNERIAASSHVLLANIEREPYRRPLLQAGAIVD
ADLPSQHAGQQLQPFESSVLYHGISSAKSPVQNNRRTSVQISGAPTVPLARRQDLPQRDS
AYSKHHLPANETKQDKNSEKCPVGWTLHDKHCYYLNSLQNTTWEHAERICAQTLYSHLTS
VHSEAEMKWLWKFAEKRPFWIGLMSTGEGWLWSNGRPLTFSYLKRVGHEVTSGKCVLVSK
KKEWVARRCDSGHKERSLCSLPLLNMSDLSSPKLGNK
NT seq
6414 nt
NT seq
+upstream
nt +downstream
nt
atggatacttcaggttactttttgaagatcttagtacttctttacatgccattatatggg
tttgtgaaagcttcaacgttaatcgtgagaaatactggcataaaagttggaagaggacaa
aacatttacattagtgagaatgaattactcttcagtattcctcataataaagacacatgc
aaagtggaggttgttctgagtgagccaacaacacaagtggtgggaagactttctccacag
gtatttgattgccacttcttgccagaggaggtcaaatattctcacaatggctcaccaatg
ctgactgaagattctgtcatgatcagagtttacaggttttctgaacttgagacaattgtg
gaaatcgttctgattaaaatacagatcactgattcagtgggtggcattgttcatcttggg
cctgactcgttggaagtcccagagttttatggagtatcaactaaaccagtggataaaaat
attttgacattcaagcctacctgggataagcttggaacaagctgtgtggtcagaacactc
ttgtctgaactactgcttcccgctcatgggcaggttgtcattgaggacacaagaggcgct
ggcacacctgtgcgtgggccttcacttacacacagagtgagaaactacagacaagaaagc
atgccatgcccaggtaacaaagcatgcaatactggactgaaggaaatgagacttctgaaa
gccaactgcaaagactttatggaaatgggaataaaatatcagcatcttagccctccatca
cctaacattgattatattccacttcaagtagaattacagggaggcgagaacagaaaacaa
ttacagacacaaaatatttggattcctgtagtaatcgcaggtgctattccaaacactcct
ccacgagcagcatttatgcccatgtttatattggaagtagatcagtttattcttacgaca
atcaccacagcaactgtagatgcagaagatgatgaaacaccaaaaaacaagcttgtattc
aaaataagtaagccgccaacagcaggatatataacacatgcagatgaccacaccaaagcc
gttacatcttttacatggcaggatctgcatgatatgaacattgcttaccagccaccctgt
actccacataatgagcgacagaactatgaggttgaatttcaagcaatagacagttttttc
ttggtcagtgctccaataactgtacatatctccatcagaacatcagaaaccaatgctcct
agggtagcatggaacatgggtctgaacttgttggaaggacagtcccggcctatctcatgg
gatgtttttcagatagtagataatgataatcttcatgcagtgcgccttgtcactgtggat
ggtttgcttcatggacgccttacagttagaggggtcaaagcgtttatctttacagtaaag
gatataaaagataaagttgttcgctaccatcatgatgacagtgacactaccaaggattac
attgtctttagaattttcgatgggaagcacagcattcggcataagtttccaataaatatt
cttcctaaggatgacagcccaccatttctagtaaacaatattggttttgaattagtagaa
ggggcaaccatccttattgagggacacatgttaatggcttctgaccttgattcaagtgat
gattatattctatacaatattacaaagccacaaaaagctggggaactggtaaagaaatat
tccacagaaagctcagggatcccagtttcaaccttcctgcagagagatctgttccgtggt
ctcatttattacaaacattttggcggggagatctttcaagactcttttgagtttgtctta
tcagatagtcacgatcctccaaactattctgaagaacaaattgtgacaattcatattact
ccagtcaaagatcaacttcccaaagaagcagaaggaactagacgacatctcattgtaaag
gaaactgagataaccagaataacaaaggaacatttgcattttgtagacactgaaagtcct
gacaatcatctaatttatactgtaactaaaacatgttatgcaccagagtatccaggtctt
cttgatgcaggaagacttatttttgttgataccacagataaactagaaaaggactcgtcc
aaccctaccctaaactttttcagtcagcatgcagtcactcatctgaaagtagcctacatg
ccaccccagagagaaattgggcctgacccaatacttgtgcagtttgtattttctgtaagt
gaccagcatgggggacagttgtctggacttacctttaatatcacagtaatgccagtggat
gaaaaaactccagagattttcacaaatgctataaagacagaggaaggctcaagctgtttt
attactggagagaatctgcaaattacagatgtagacacgaaaatggagaatctgaacatt
gtactgaaaacacgtccactgcatgggcgtgtagaagttcatggtgtgactatgtcagaa
ggagatgtttttactgtggaagaactgacagcctttaaagtcaggtatcagcatgatgat
tcagagtcatttgaagatacagtttcctttactgtaacagatggatataacactgcagat
ggagtgctgaaagtgcagataataccagtgaatgatgagcctccagagcttaaggaagga
cttaaagctgacttaaaatgtcaagaaggaagttctgttaccataaccagtgagaacctc
tatgccattgaccccgatagtgaagacacaaaacttacatatattattgctcgtattcca
atgtttggaataatacaaagaggaggtatcatagtggaaaaattcactcagcttgatatt
actcaaggattaatttcatacatacatactggtggtgagattgggccaagtccttgtttg
gacacagtaacattgattgtctctgatggtgaagctggagctgctggcacctgctgttca
gcagattcacttcccccaccagtcccattacattccagcctccctgtctatgatctaaac
atcactgtcatgcctattaataatcagcaaccagttttaaatatcggggaaattttcgct
gtttatgaaggatcttcttctgttattaatctaaattatctaaatgcatctgatactgac
acaactttggaagagttatattttattatggagacgcaaccaaagtatgggtaccttgag
aacactgtaccaatggatggctcagaaaagccttcttctaacaaaaacataagtttcttc
agtctctggaatgtaagttctggatatatcagatatgtacagtcagagcatgaacacaaa
gagcccacagcagatgtcttcaaggtttctgtcagtgatggtgttcagagatctatgcca
atgcctttctacattcttattaagccaacgaatgatgagatgcctcaattacatgtcagg
aatattacgataattgaaggtggaatttgtgagatcggccccggaacactaaatgcagag
gatctcgacattccccccgacacattgcaattttccattgtaatctctccatctcatggg
ctcatattaaatggagagtatggaaggaatatcagtcagcttaaacacctgagtcccatt
gcacttcacaaagacctccaaatttacagctttaccctggatgaactgaagcaaggaatg
gagcttgtgtacttgcatgatgacacagacactctacatgatagctttgccatacagctg
acagatggcaaacacacagtccaagagacacttcacatctatatcatgccagtgaatgat
gaaaaaccacatcttatcagaaatgctggtttagaagttgaagtagctgaaaataaatta
atatccagcgtggtattggaagcagaagataaagattctcccaggaatggcattcagtac
atcatcaacaatgccccaacttttggagatcttaaaatgaaggtgacttctacttggatc
acactttatcctggaatgaattttacacaagaagatgtagatatgaaccatgtctggtac
tttcatacagtaattcttggatgcaaagggcacgacagcttccgctttatgataacagat
ggggagcacacatcagcttcagaaattttctatatatcagttcaaaatcttgagaaaggt
gacattatactattcaccagacctataactttaacagagggtgacagggtgaccttgatg
acagatgttcttatggctacagatggcactggccaaccagagaagctgctgtatgccatc
tctgtgccacctgtgcacggtcagattgagtacatcaattatcccggcgtgcccatttcc
agtttcagccagttggatgttgcggcccagaaggtttgctacgttcacgacaacagtcac
gacactagtaaggatttattcagtttcacagtaagtaacggtctaacagcaaaagatggc
ttcctggagtttgtcattatacaaacagatcgaattccaccatctttagtcaacaacaag
gctatcaacatactagaaagagcaatagtggttatttcttcaaattacctacaactcata
gatccagacagtcctctggacaaactaacctatactgtcactgaatatccacatcatgga
cagctgtacctgaaaggaaaccctctccagcagagccatttctctcagactgatataaac
aacatgcatctatcctacagacattatggaggggctgcagagttggaccggtttttattt
gtcggtacggacaacaccaaccaaggttttttggttgatggtcaaatgagaaaaagtgct
gtggcctttattatacagatagagcacctggataacttaccccccaagctacttatcaag
gagagcccttctatagtcgagaatacaaaggatggaagagcaatgatccatattacagct
aggaacttaaaagcaacagattctgacagcaaagatgaagaccttaaatttgtaatcctg
agatctccatattttgggcatttagaaaatgctaaaacaggtggatttgtggggactata
tttactcaaagggagataaatcagagagctattcgatacatcataaatccctcggttgaa
gtgaattcagacagctttgaatttaaaatctctgatccagcaggaaatgaaattctttca
gaaacatttgaactgaaatggtctgttatacaactgtctcagctccactaccgcacatgt
gaaaatgttggaacattcggtgtaaagttaattcgaacgggcagtagtaaagatccagca
tttgttggcataaaggtggatgaagtctctgcaagagctgggctggattttacccacagc
agcgcaagtcttgtacagttcgatccaggagtttctacaaaacagtggaatatacacata
aaaaatgatggcttggaagaaaaccacgaagtcctaaaaattgtcttgaaaacaccaaag
aatgctgtacttggaaaaatccacgaggcaacaatagagatcatcgatctaagagctggt
caatgcagtctgcaagattcaaaatccagtggcgttacgtggaattccgaaaataccggc
ctttctaataggcagttgtctagaaatgaacgaattgcagcaagcagccatgtattactt
gccaacatagaaagagagccttatagacgtcctcttctgcaggcaggagctatcgttgat
gctgatctgccttcccagcatgcaggacaacagctgcagccctttgaaagcagcgtgctc
tatcatggaattagttctgcaaaaagtccagtgcagaacaacagaagaacttcagtgcag
atttcaggtgccccaactgtgcccttggcaagaagacaagatcttcctcaaagagattca
gcctacagtaaacaccatttaccagcaaatgaaacaaagcaggataaaaattcagaaaaa
tgcccagtgggttggacacttcatgacaagcactgctattatctgaattccttgcaaaat
acaacttgggaacatgcagaaaggatctgtgcacaaacattatacagtcacttaacaagt
gtgcactcagaggcagaaatgaaatggctttggaaatttgccgaaaagaggccattttgg
attggattgatgtcaactggagaaggctggctgtggagcaatggaagaccactgaccttt
agttatttaaaacgagtaggccatgaagtaacaagtggaaaatgtgtccttgtttcaaag
aagaaagaatgggtagccagacgatgtgattcgggtcacaaagagagatctctctgttct
cttcctcttctgaacatgagtgatttgtcctcgcccaaattgggaaataaatga
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