Xenopus laevis (African clawed frog): 108714373
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Entry
108714373 CDS
T01010
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
108714373
Spliceosome [BR:
xla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108714373
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_occluded
RRM_8
RRM_PARP14_3
GlcNAc-1_reg
Cys_Met_Meta_PP
Peptidase_M9_N
RRM_Nup35
MSP1a
Motif
Other DBs
NCBI-GeneID:
108714373
NCBI-ProteinID:
XP_018114032
UniProt:
A0A8J0V2S6
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All DBs
Position
4L:98084402..98106023
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AA seq
531 aa
AA seq
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MDGIVTDVPVGIKRGSDELLSGSVLNGPSSNMSSVVVTANGNDNKKFKGDDKMEAAPSRV
LHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAASTMVNYYTTITPH
LRNQPIYIQYSNHKELKTDSALNQRAQAVLQAVTAVQTSNSTVTGTAANDNTVSSAQSPV
LRIIIDNMYYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYGEPVNAQQAKLALDG
QNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSL
LAVPGALSPLGIPNAAAAAAAAAASRVGMHGVSTGGNTVLLVSNLNEEMVSPQSLFTLFG
VYGDVQRVKILYNKKDSALIQMADGNQSQLAMSHLNGQKMYGKIIRVTLSKHQTVQLPRE
GLDDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPQNITEDDLRTLFTNTGG
NVKAFKFFQDHKMALLQMSTVEEAIQALIDLHNYNIGDNHHLRVSFSKSTI
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggacgggattgtcactgatgtgccagttggcattaagagaggatcagacgagttactt
tctggaagtgtgcttaatgggccaagctccaatatgagcagtgtagttgtaactgccaat
ggtaatgataataaaaaatttaaaggagatgataaaatggaagccgcaccatcaagagtc
ctacatattagaaaacttcctggggaagtgactgaaacagaagttattgctttgggctta
ccttttggaaaagtcaccaatattctcatgcttaaaggaaaaaatcaggcatttttggaa
ttagccactgaagaggcagcctccaccatggtcaattattacaccaccataactcctcat
ttgcgcaatcagcctatctatattcaatattctaaccacaaagaacttaagacagacagt
gctctaaatcagcgtgcccaggcagttctgcaggctgttacagcagtacagacatccaat
tccactgtgactggtactgctgcaaatgacaatacagtgtcttcagcacaaagtccagtg
cttcgaataatcattgataatatgtactatcccgtgactcttgatgtcttacaccagata
ttttcaaagtttggcaccgtgttgaagattattacatttacaaaaaataatcagtttcaa
gctcttctgcaatatggtgaacctgttaatgcgcaacaagcaaagctcgctctagatgga
caaaatatttataatgcatgctgtaccctgcggattgatttttctaaactggtcaatttg
aatgttaagtacaataatgataaaagtcgtgactacactcgtcctgatcttccttctgga
gatgggcagcctgcactggatccagctattgctgctgcttttgcaaaggaaacatcactt
ctagctgttcctggtgcattgagtccgctggggattccaaatgctgcagcagctgcggca
gctgcagctgccagccgtgttggtatgcatggagtctctactggtggcaatacggtgctt
cttgtaagcaatttaaatgaagagatggtttcgccccaaagtctgtttaccctcttcggt
gtttatggagatgtgcaacgtgtgaaaattctgtacaataagaaagatagtgcccttata
caaatggcagatgggaaccagtcacagcttgcaatgagtcatctaaatggacaaaaaatg
tatggaaaaataattcgggtaaccctgtctaagcatcagacagtccagctacctcgtgaa
ggccttgatgaccaagggcttacaaaagactttagcaactctccattgcatcgttttaaa
aagcctggttcaaagaactttcagaatatattcccaccctctgcaactctccatttgtct
aatataccacaaaatatcacagaagatgatttgcgaactctctttacaaacacagggggc
aatgtcaaagcattcaagttttttcaagatcataaaatggccctacttcaaatgtctaca
gttgaagaagcgatacaagctttgattgaccttcacaactacaacattggagataatcac
catctgagagtttcattttcaaagtcaactatttaa
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