Xenopus laevis (African clawed frog): 108714440
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Entry
108714440 CDS
T01010
Symbol
wdr47.L
Name
(RefSeq) WD repeat-containing protein 47 isoform X1
KO
K24746
WD repeat-containing protein 47
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xla04990
]
108714440 (wdr47.L)
Domain-containing proteins not elsewhere classified [BR:
xla04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
108714440 (wdr47.L)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR47_COR
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR3_2nd
WDR55
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT122_1st
Beta-prop_Aladin
Beta-prop_EML
Beta-prop_WDR19_1st
LisH_TPL
Beta-prop_EIPR1
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
TPR1-like_2nd
Beta-prop_NUP159_NUP214
DUF4494
DUF3752
Motif
Other DBs
NCBI-GeneID:
108714440
NCBI-ProteinID:
XP_018114161
Xenbase:
XB-GENE-17332823
UniProt:
A0A974D493
A0A1L8GNA4
LinkDB
All DBs
Position
4L:complement(108558822..108593622)
Genome browser
AA seq
919 aa
AA seq
DB search
MTAEETINVKEVEITKLILDFLNAKKLHISMLALEKESGVINGLYSDDMLFLRQLILDGQ
WDEVLQFIQPLECMEKFDKKRFRYIVLKQKFLEALCVNNAMSAEEDPNHLEFTMQEAVKC
LHTLQEYCSSKEDYSKLCLLLTLPRLTNHAEFKDWNPSTARVHCFEEACAMVAEFIPADR
KLSEAGFKASNNRLFQLIVKGILYECCVEFCQSKATGEEITESEVLLGIDLLCGNGCDDL
DLSLLSWLQNLPPGVFSCAFEQKILNIHVDKLMKPSKAAYADLLTPLINKLSPYPSSPMR
RPQSADAYMSRSLNPALDGLTCGLSGHDKRSAEPGSKTSPMSHSFANFHYPGVQNLSRSL
MLESTDCHSIYEESSERSETPQEKETPNSSETICENASPENDQENAGENEEQNNKPERNE
LRESTEQFEEYYRQKLRYQQHLEQKEQQRQLYQQMLVEGGVNQAEEAEHPQNLTEQFLNR
SIKKLGELNVGMEPLEEPIQPMNKLHNGPMESSITAPNGHSPLGTAVLQRGNQQPDGQSI
NTSTPRKLGSTSYIPFPEESPVFGSASSAKEQAQVEDSSGTGGRICSETDKKQKQQFVCL
NTLEDTQAIRAVAFHPSGSLYAVGSNSKTLRVCAYPDVIDTSVANPPMQPTVRFKRNKHH
KGSIYCVAWSPCGQLLATGSNDKYVKVLPFSAETCNATGPDLEFSMHDGTIRDLAFMEGP
ESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWSGWMIASGSQDKTVRF
WDLRVPSCVRVIGTTFHGTGSPVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYHP
HSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKPLPIIEVGEHKDKVIQCRWHTQD
LSFLSSSADRTVSLWTYNV
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaggaaacgattaatgtgaaagaggtggagattacgaagttaattttagac
ttcttgaatgccaaaaagctgcacattagcatgcttgctcttgaaaaagagagtggggtg
ataaatggactgtattctgatgacatgctgtttctcaggcagctgatcttggatggacaa
tgggacgaggtccttcaatttatccagcctctggaatgtatggagaagtttgacaaaaaa
aggtttcgttatattgttctgaaacagaaatttttggaggcactttgtgtcaacaatgca
atgtcagcagaggaggatccaaaccatcttgaatttacaatgcaggaagctgttaagtgc
ctgcacacactgcaagaatattgttcgtctaaggaggattacagcaagttgtgtctactc
ctcacccttccgcggctcactaatcatgcagaattcaaagactggaacccaagcacagct
cgtgtacactgttttgaggaggcatgtgcaatggtggcagaattcattcctgctgatcgc
aagctgagtgaagctggatttaaagctagtaataacagactgttccagcttatcgtgaaa
ggaattctgtatgagtgctgtgtggagttttgccagagcaaggcaactggggaagaaatc
actgagagtgaggtactgttggggatagatcttttatgtggcaatggctgtgatgatcta
gacttgagtctcctctcttggctgcagaatttaccccctggcgttttctcctgtgctttt
gagcagaagatactgaacatccatgtagataagctaatgaagcctagtaaagctgcatat
gcagatctcctcactcctctcatcaacaagctctccccatatccttcatcacccatgagg
cgcccccagtcagccgatgcttacatgtctcgctctttaaacccagctctggatggcctg
acatgcggactgagtggccacgacaaaagatcagcagaaccaggaagcaagacgtccccc
atgtcccactcctttgcaaattttcactatcccggtgtgcagaacctcagccgtagcctc
atgctagagagcactgactgtcacagtatatatgaagaatcatcagagaggagtgaaacg
cctcaagaaaaggaaaccccaaacagtagtgagaccatttgtgagaatgcctctccagaa
aatgaccaagagaatgctggtgaaaatgaagagcaaaacaataaaccagagagaaatgag
cttcgagaatccacagagcagtttgaggaatactatcgtcagaaattacgctaccagcag
cacctggaacagaaggaacaacagaggcagctttaccaacaaatgcttgttgagggaggt
gtaaaccaggctgaagaggcagaacatccacagaatcttactgagcaatttctcaacagg
tccatcaaaaagttgggagaactgaatgtggggatggagccccttgaggaacctattcaa
cctatgaacaaactacataatggccctatggaaagcagcattacagcccctaatggtcac
tccccactgggtacagctgtgctacagaggggcaatcagcaacctgatggtcagagcatc
aataccagcacacctcgcaaactaggatccactagctacattccttttccagaggagtct
ccagtgtttggaagtgcaagcagtgcaaaagaacaggcacaagtagaagattcttcaggc
actggaggcagaatatgttcagagactgacaagaagcagaagcaacagtttgtatgccta
aacaccctggaggacacccaggctattcgcgctgtagccttccatcctagcggttctctg
tatgctgtggggtccaactccaaaacactgagagtctgtgcataccctgatgtgattgac
actagtgttgcaaaccctcccatgcagccaacggttcggtttaagaggaacaagcaccac
aagggctccatttactgtgtggcttggagcccttgtgggcagctgttggccacaggctct
aatgataaatacgtcaaagtgttgcctttcagtgctgagacctgcaatgcaacaggtcca
gatctggagttcagcatgcatgatggtactataagggatctggcttttatggaaggacca
gagagtggtggggccatattaatcagcgcaggtgctggagactgtaacatatacactaca
gactgtcagcgtgggcaaggccttcatgcgctcagtgggcatacagggcatatcctggca
ctttacacatggagcggctggatgattgcatctggatcccaggacaaaacagtgcggttt
tgggacttacgagtacccagctgtgtgcgagttattggaacaactttccatggcactggc
agtccggtggcctcggtagccgttgatcctagtgggagactccttgccacaggacaagaa
gattctagctgcatgctgtatgatatcagaggaggccgcatggtgcagagctatcaccca
cactccagtgatgttcgctctgttcgcttttcacctggagctcattaccttctcactggt
tcctatgatatgaagatcaaagtaacagacttacaaggtgaccttacaaagccgcttccc
atcattgaagtaggtgagcataaggacaaggtgatccagtgccgatggcatacacaagac
ctctccttcctctcttcttccgctgacagaactgtatcactgtggacttacaatgtgtag
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