Xenopus laevis (African clawed frog): 108714489
Help
Entry
108714489 CDS
T01010
Name
(RefSeq) paired mesoderm homeobox protein 1 isoform X1
KO
K09329
paired mesoderm homeobox protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108714489
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108714489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108714489
NCBI-ProteinID:
XP_018114269
UniProt:
A0A8J0V774
LinkDB
All DBs
Position
4L:complement(115756079..115832472)
Genome browser
AA seq
248 aa
AA seq
DB search
MTSSYNHHLLDRQGTLGSRLESPITASLDNLQAKKNFSVSHLLDLEEAGDMVGAQAEDGS
GEAGRSLLESPGLTSGSDTPQQENEQMNAEQKKKRKQRRNRTTFNSSQLQALERVFERTH
YPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLANKNASLLKSYAGDVTAVEQ
PIVPRPAPRPNEYLSWGTASPYSAMASYSSTCANTNPAQGMNMANSIANLRLKAKEYSLQ
RNQVPTVN
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgacctccagctataaccaccaccttctggacaggcagggcaccctgggcagccgcttg
gagagtcccatcacggccagtctggacaatttacaggccaaaaagaacttctcggtgagt
cacctgctggatctggaggaggctggggacatggtgggggctcaagccgaagatggatca
ggggaagccggcaggagcttactggagtccccgggtttgaccagtggaagtgacactcct
cagcaagaaaatgaacagatgaatgcagaacagaagaagaagagaaagcaaaggaggaac
agaactacatttaacagcagtcaactgcaagctctggaaagagtgtttgagaggacgcat
tatccagatgcctttgtacgggaagacctagcgcgcagagttaacctcaccgaagccaga
gtccaggtttggttccagaacagaagagccaagttccgcagaaatgaaagagccatgctg
gcgaacaagaatgcttcccttctcaaatcctatgcaggagatgtgaccgctgtggaacag
cccattgtaccccgcccagccccgaggcccaatgagtatctatcttggggcacagcctcc
ccatatagtgccatggctagctattcctctacctgtgccaacaccaatcctgcccagggg
atgaacatggccaacagcatcgccaaccttaggctgaaggcaaaggaatacagtttacag
aggaaccaagtgccaacagtcaattaa
DBGET
integrated database retrieval system
