Xenopus laevis (African clawed frog): 108714535
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Entry
108714535 CDS
T01010
Symbol
sgsm3.L
Name
(RefSeq) small G protein signaling modulator 3 homolog
KO
K20176
small G protein signaling modulator 3
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108714535 (sgsm3.L)
Membrane trafficking [BR:
xla04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108714535 (sgsm3.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RUN
RabGap-TBC_2
SH3_1
SH3_2
SH3_9
RNA_pol_Rpb1_3
Motif
Other DBs
NCBI-GeneID:
108714535
NCBI-ProteinID:
XP_018114344
Xenbase:
XB-GENE-17331260
UniProt:
A0A1L8GNS5
A0A974D4K8
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All DBs
Position
4L:119788956..119823621
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AA seq
753 aa
AA seq
DB search
MSGSYTPSPGGPFSALTASMWPQDMLAKYTQKEQTVEQPEFRYDEFGFRVDKEDGAEPNS
SKLLGIPLTEDPQQRLRWQAHLEFTHNHDVGDLTWDKIDVTLPHSDKLRSLVLAGIPHSM
RPQLWMRLSGALQKKHNSEMTYKDIVRNSSNDDTLAAKQIEKDLLRTMPSNACFSNLQSV
GVPRLRRVLRGLAWLYPDIGYCQGTGMVAACLLLFLEEEDAFWMMAAIVEDLVPVSYFNT
TLVGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLTAFANVVHIKLLLRIWD
FFFYQGSLVLFQTTLGMLKMKEEELIQSENSASIFNTLSDIPSQIEEADVLLREAMLISG
TLTEVMIEAQRRKHLAYLIADQGQLLNSTAAVTNLSKIMRRQSQRRKSGITTLLFGDDDF
EALKSKNIKQTALVADLREAILQVARHFQCTDPKNCSIDLTPDYTMESHQRDHENYVSCS
RSRRRRAKALLDFERHDDDELGFRKNDIITIISQKDEHCWVGELNGLRGWFPAKFVEILD
ERSKEYSVAGDDSVTEGITDVVRGTLCPSIKSIFEHGLKKPSLLGGPCHPWLFIEEAASR
EVERDFDSVYSRLVLCKTYRLDEDGKVLTPEELLYRGVQSVNVSHDAAHAQMDVKLRSLI
CIGLNEQVLHMWLEVLCSSLPTVEKWYQPWSFLRSPGWVQIKCELRVLSKFAFSLSPDWE
LPVKREDKEKKPLKEGVQDMLVKHHLFSWDIDG
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaagctacacgccatcaccaggcggccctttctctgcactcactgccagtatg
tggcctcaggacatgcttgccaaatacacacagaaagagcagactgtggagcagccagag
tttcgctatgatgaatttggatttcgagtggataaggaagatggagcagagcctaactct
agtaagctgttgggtatcccactaacagaggacccgcaacaaaggctgaggtggcaggct
cacctggagttcacccataaccatgatgtgggagacctgacgtgggataaaattgatgtt
acactccctcattctgataagctgcgctcccttgtcttagccggaatcccccacagtatg
agaccgcagctttggatgcggctctcgggtgccctgcagaagaaacataattcagagatg
acttataaagatattgtgcgcaacagttccaatgatgatactctggcagcaaaacagatt
gagaaggatttactgaggacaatgccaagtaatgcctgtttctcaaacctacaaagtgtg
ggtgtgcctcgtctgcggagggttctgcgtggtttggcatggttatacccagatattggt
tactgtcaaggcactggaatggtggctgcatgcctgctgctctttttagaggaagaagat
gcattctggatgatggctgccattgtagaagacctggtgccagtctcatactttaacact
acccttgtgggggttcagacagaccagagggtcctgaggcacctcattgttcagtatctc
ccacggcttgacaaattgttacaggaacatgatattgagttgtctctcatcacattacac
tggttcctcactgcatttgctaatgtagtgcacataaagctgctgctacggatctgggat
ttcttcttttatcagggctctctggtcctatttcagactaccctgggaatgctgaagatg
aaggaagaagagctcattcagtcggaaaactctgcttccatttttaacacattgtcagac
attccctcccagatagaggaagcagatgtgctcttgcgagaggccatgttgatctcagga
acgctaactgaggttatgattgaagcacagagacgcaagcacctggcatacctcattgca
gaccaaggccaactgcttaactcaactgccgctgtcaccaacctttctaaaattatgagg
aggcaaagccagcggagaaagtctggcatcaccacattgctgtttggtgatgatgacttt
gaggctctgaagtccaagaatatcaagcaaacggcgctggtcgcagacctacgggaggca
atactacaggttgctcgacactttcagtgcacagacccaaagaactgtagcattgatctg
actcctgactatactatggagagccatcagcgtgaccatgaaaattatgtgtcttgctcc
cgaagtagacgccgcagagctaaggccttgctggactttgaacgacatgatgatgatgag
cttggctttcgaaagaacgacataattacgatcatttcccaaaaggatgaacattgctgg
gttggtgaactgaatggactcagaggctggtttccagcaaagtttgtcgagattcttgat
gagaggagcaaagagtattcagttgctggggatgactcggtgacggaaggcatcacagat
gtggttcgagggaccctctgtccaagcatcaaatcaatctttgaacatggactgaaaaag
ccgtctttattgggaggtccgtgtcacccatggctctttatagaagaggcagcaagtcga
gaggtagagagagactttgactcagtttattctcgtctagtcctgtgtaagacctacaga
ttggatgaagatggcaaagtgttaaccccagaggaactgctctatcggggggtgcagtct
gtaaatgtcagccatgatgcagcccatgcacagatggatgtgaagctccggtctctcatt
tgcattggcctcaatgagcaggttttgcacatgtggcttgaagtgttgtgttccagcctg
ccaaccgtagagaagtggtaccagccatggtctttcttaaggagtcctgggtgggtgcag
attaagtgtgagctgagggtcctctcaaaatttgccttcagtttgtctccagactgggag
ctgccagtgaaacgagaggacaaagaaaagaagccactgaaggaaggagtacaggatatg
ttggtgaaacatcaccttttcagctgggacattgatggataa
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