Xenopus laevis (African clawed frog): 108714926
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Entry
108714926 CDS
T01010
Symbol
chd8.L
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108714926 (chd8.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108714926 (chd8.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108714926 (chd8.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_Hrp3
MUN
CHDCT2
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
108714926
NCBI-ProteinID:
XP_018115294
Xenbase:
XB-GENE-966850
UniProt:
A0A8J0V5F4
LinkDB
All DBs
Position
1L:153985141..154049308
Genome browser
AA seq
2338 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTGDSFGRDGPDTIDDALGLANVLGPLEPITTDRIGLPGAD
AGINGNKHHIASQVLPDNTALVSTTEIMQPCQTSTNQETLNQGNPFMGASNAGTGAPKIM
ILKAPAGMTVGACPVTQIQTLTPHQTANGGKVTFAKVLTGTPLRPGVSIVSGNTVLAKMP
STGVAGQVGAVRPVRQLVLQPMRASTAPGSSDNLGIKPAVTLTSTPQQGDPKRITLVLQQ
PPQAGATAPLGQRHVVLGGLPGKIVLQGNQLAALTQAKTPQGQQAKIVTIQLQVQQQPGA
AGQIPQKFQIVQQAQGGIAIAPSGQQTHVLNQQGVQRFSVPLKVILQPQAGCSQGTTQGL
SVVKVLNANEVANLTASQTVVKAASAGGGESRRQDSQKKQEKANRIVAEAIARARARGEQ
NIPRVLNEDELPSVNPEDDDGSRRKRKKKKGETSDRSKDEKPKKVKGSGSSKSKSKGKPS
TITPIVGKKRKRNPSSDNSDAEMIASQASPGEDEDSVQKRRSNRQVKRKKYTEDLDIKIT
DDEDDEEVDVTGPVKTEHVLLPEPMLIPDNETAPSMQFFVENPSEEDAAIVDKILSMRFA
KKELPTGEYFEIEEYFVKYKNYSYLHCEWATIEQLERDKRIHQKLKRFKTKITQMQHFLQ
EDEESFNPDYVEVDRILDESHSTDKDNGEPVVYYLIKWCSLPYEDSTWELKEDVDDGKIE
EFKQIEARQPNLKRVARPAATSWKKLELSREYLNGNQLREYQLEGVNWLLFNWYNRQNCI
LADEMGLGKTIQSITFLQELYNVGIRGPFLVIAPLSTITNWEREFASWTQMNTIVYHGSL
ASRQMIQQYEMYCKDSKGHLIPGAYKFDALITTFEMVLSDCPELREIEWRCVIIDEAHRL
KNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPTQFSSEAEFLKDFGDLK
TEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLT
KGASQSNTPNLLNTMMELRKCCNHPYLITGAEEKIMSDFREATPVVPLDFHLQAMVRSSG
KLVLIDKLLPKLRAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNMRQAAID
RFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVK
IYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDNHLSGPIQQFTKKEIEDLLRKGAY
AAIMDEDDEGSKFCEEDIDQILLRRTTTITIESEGQGSTFAKASFVASENRTDISLDDPN
FWQKWAKKADIDMNLLNSKNTLVIDTPRIRKQTRHFTNKDDDMVEFSDLESDDDDRPKAR
RQDRKHGYGRTDCFRVEKHLLVYGWGRWRDILMHGRFKRGMTERDVEKICRAILVYCLLH
YRGDENIKSFIWDLITPAENGKTKQLQNHSGLSIPVPRGRKGKKVKSQSSFDIHKAEWIH
KYNPDTLFQDEGYKKHLKHQCNKVLLRVRMLYFLRQEVIGNQAMKVLSGVDARHIDTWFP
QVDQVEVPSRWWDREADKSLLIGVFKHGYEKYNTMRADPALCFLEKVGGPDEQAIAAEHH
AQDFSEMPDGGDFDRDIEDPEYKPLHAHKEPEDEIDSLMMDEEISVVDGEEATSMPSGML
WPPGSALTARLRRLITAFQRSYKREQLKLEAEERGDKRRKRCEAAFKLKEIARREKQQRW
TRREACDFFRVLSSFGVEYDPDTQLYDWQRFRGLARLDKKTDESLLKYFHGFVAMCRQVC
RLPPAAGDEPPDPSLFIEPISEERASRALFRLDLLRRVREQVLCHPLLIPRLSLCRPDTE
LPEWWESGRHDHELLQGAARYGLSRTDLTILQDHTFSFLRCQISYFQSRGISGHSRPSTP
TTAPPVPTERQPSHLASLSSSVSCSPAPRRSSSCSSSSSSSNSEDSSDESNGVKVKPNAG
LPHARLYDEESRLSLAASPADLATEDSTQTALETPSSADWPKDRVLLCRIEQVCSAVLTG
KWSSPRRLSDPLSDSPDSLSPTPEQQSPVHFTQIRSAPDPKEFTIQIKSEEGLKIKFQKH
KFTSNGALDSAPHTQKKKSKKKMDLDMDMRIPVVNQKDGTLLLGEEAPLRCQLPEWLHRN
PDFMVDPRFIAFMEDRRKRKKHRSKKSKSSSQIGNVQNPHPHNGKKSSHTENSFETQHLP
TAAKKRKKRPPSKIVMPSALHGAGDVTHSFSDLQPDHSGHSMRSVYGPSDGGLSHQAGLS
GLGFTRFHSSQTSLVGRIHGTTFDELQSFEPPQRHFSLLDDPMMPANSSSSGDELDRP
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccctatcatggacctctttgatgatccaaacctatttggccttgactctctt
actggagactcctttggacgggatggaccagatactatagatgatgctctaggcctggct
aatgttttgggacctttggagccgatcacaacagaccgaattggcctgcctggtgctgat
gctggcattaatgggaataagcatcatatagcgtcacaagttctcccagacaatacagct
cttgtatcaaccactgaaatcatgcagccctgtcaaacatccacaaaccaggaaacactg
aaccaaggaaatccctttatgggtgcctcaaatgctggaacaggagccccaaaaattatg
attctgaaagctcctgctggaatgacagttggtgcatgtcctgtaactcagatacaaact
ctgacacctcatcaaacagctaatggtggcaaagtgacatttgctaaggtgcttacagga
actccattacgtccaggggtctccattgtatctggaaacactgtccttgccaaaatgcca
agcactggagttgcaggccaggtaggggcagtgagacctgtccgtcagcttgtgcttcaa
ccaatgcgtgcctccacggccccaggaagctcagataatctagggatcaagccagcagtc
acattaacatcgacacctcaacagggggaccctaaaaggattactcttgtcctacaacag
cctccacaagctggggcaactgcaccactggggcagcgacatgttgttctgggtgggctt
ccaggaaagattgtccttcagggaaaccaactggcagctctcacacaagctaaaacccct
caaggtcaacaagctaaaatagtcacaatccagctgcaagtccagcagcagcctggggct
gcaggtcagattccccaaaagtttcagattgtacaacaagcacaagggggtatagcgatt
gctcccagtggacaacaaacacatgtgcttaatcagcaaggagttcagaggttttcagtt
cccctcaaagttatcctgcaaccacaggctggttgctctcagggtaccacacagggcctg
tcagttgtgaaagttttaaatgcaaatgaagttgccaatttgactgcaagtcaaaccgtg
gttaaagctgcatccgctggaggtggtgaatcccgtaggcaggacagccagaagaagcaa
gagaaagctaaccgtattgtagctgaagctattgccagggcccgagccagaggtgaacag
aatatacctcgggtcctgaatgaggatgagcttccaagtgtgaaccctgaagatgacgat
ggaagcagacggaaaaggaagaagaagaaaggagagactagtgacaggtccaaggatgag
aaacctaagaaggtgaaaggtagtggaagctctaagtctaagagcaaaggcaaaccaagt
actatcactcctattgtgggtaagaaaaggaagagaaacccatcttccgataattctgat
gctgagatgatcgcatcgcaggcttctccaggagaagatgaagacagtgttcagaagaga
cgttcaaatcggcaggtgaaacgcaagaagtatacagaggacttggatattaaaataaca
gatgatgaagatgatgaggaggtagatgtcacaggacctgtgaaaacagaacatgttctg
cttcctgagcccatgcttatacctgacaatgagacagccccttcaatgcagttctttgtg
gagaacccaagtgaagaagatgctgctattgttgacaaaatactttctatgcgcttcgct
aaaaaagagcttcccactggagagtattttgaaattgaagagtactttgtcaaatataaa
aattattcctacctacactgcgaatgggccacaattgagcaactggaaagggacaagcgc
attcatcagaagctgaaaagatttaaaacaaaaattactcagatgcagcatttcttgcaa
gaagatgaagaatctttcaatccagactatgtagaggtagatagaatccttgatgaatct
cacagcactgacaaggacaatggtgaaccggtggtgtactacctaataaaatggtgctct
ctgccctatgaggatagcacgtgggagctgaaagaagatgttgatgatggcaaaatagag
gaattcaaacaaatagaggcgaggcagccaaacctcaagcgtgtggcccgtccagctgcc
acatcatggaaaaagttagaactgtcgcgagagtatctgaatggaaaccagctgagagaa
taccagctggaaggtgtcaattggctgctctttaattggtacaacaggcaaaattgcatt
ttggcagatgagatgggtttggggaagaccatccaatctatcacattcttacaagaatta
tataatgttggaatacggggacctttcctagtaatcgctccactctccaccatcaccaac
tgggagagagagtttgccagttggactcagatgaatactattgtgtatcatggcagcctt
gctagtcgccaaatgatccagcaatatgagatgtactgtaaagactccaagggtcatctg
attcctggtgcatacaagtttgatgctcttattacaacctttgaaatggtattgtctgac
tgcccagagctgcgtgagattgagtggcgttgtgtcataattgatgaggctcatcgactc
aagaatagaaactgcaaacttctggacagcctgaagcacatggacttggagcacaaagtg
cttttaacagggactccattacagaatactgtggaagagttgttcagcctgctacatttc
ctggagccaacacaattttcctctgaagcagagtttctcaaggattttggagacctcaaa
acagaggaacaggttcagaagttacaggccatcttaaaacctatgatgctgaggcgatta
aaggaagatgttgagaaaaacttggcccccaaacaagaaaccattattgaggttgagctt
accaacatccagaagaaatattatcgtgcaattttggagaagaatttttctttcctgacc
aaaggagctagccaatcgaacacacccaaccttctcaataccatgatggaactacgcaaa
tgctgcaaccacccatacctcatcactggagcagaagaaaagatcatgtctgatttccga
gaagcaactccagttgttccccttgactttcacctccaggcaatggtacgctcctctggc
aaactggtgctaatagataagctgctccctaaactaagggctggaggccacaaagttctc
atcttttctcagatggtacggtgcttggacatcctggaagattatcttatacagagaagg
tatctatatgaacgtattgatggtcgtgtccgtggcaacatgcgtcaggcagctattgat
cgattcagccggccagactctgacagatttgtgtttctactctgtacacgtgctggtggg
cttggaattaacttgacagctgctgatacgtgtattatatttgactcagactggaaccct
caaaatgaccttcaggctcaagcacgatgtcatcgtattgggcaaagcaaagcagttaaa
atttatcgtctcatcactcgcaactcctatgagagggagatgtttgataaggccagtctt
aaactaggactagacaaagctgtattgcagtctatgagtggtcgggataatcaccttagt
gggcctattcagcaatttacaaagaaagagattgaagacttgctcaggaaaggagcttat
gctgcaatcatggatgaagatgatgaaggctctaaattctgtgaagaagatattgaccaa
attttactgaggcgcactacaactattaccatagagtcagagggacagggctcaaccttc
gcaaaggcaagctttgttgcctctgagaacaggactgatatatcgctagatgatcctaat
ttctggcagaagtgggccaagaaagcagatatagacatgaatctccttaacagcaagaat
acactggttatagacaccccacgaatcaggaagcaaacacggcacttcacgaacaaagat
gatgacatggttgagttctcagatttggaaagtgatgatgatgatcgccccaaagctcgg
cgtcaagaccgtaaacatggatatggacgtacagattgtttccgcgtggagaagcacttg
cttgtttatggatggggccgctggcgagatatccttatgcatggtcgtttcaagcgtggt
atgacggaacgagatgtggaaaaaatatgtagagccatactggtttattgtcttttgcac
taccggggagatgagaacataaagagctttatctgggatctgattacaccagctgagaat
ggcaaaacaaagcagctacagaaccattctggattgtctattcctgtcccccgtggtcgt
aaggggaaaaaagtaaaatcccaaagcagctttgacatacataaagctgaatggatacat
aagtacaacccagatacattgttccaagatgaagggtacaagaaacatctcaagcaccaa
tgcaacaaggtgctgcttcgtgttcgtatgttatattttcttcgtcaagaagttattgga
aaccaggcgatgaaagtgttgagtggtgttgatgccaggcatattgacacctggttccca
caggtggaccaggttgaggttccctcacgttggtgggacagagaagctgataaatccctt
cttattggggtcttcaaacatggttatgagaagtataacaccatgagagctgacccagca
ctgtgttttttggagaaggtggggggaccagatgaacaggctattgcagctgagcaccat
gctcaagacttttctgaaatgcctgatggtggggactttgatcgagacatagaagatcca
gaatacaagccacttcatgcgcacaaagaacctgaggatgagattgactctttaatgatg
gatgaggaaatctctgttgttgacggtgaggaagcaacatctatgccgagtggtatgtta
tggccacctggctctgctctcacagctcgtctacgtcgtctaatcactgccttccaacgc
agctacaaaagggaacaactaaaattggaggctgaagagcgtggggacaaacgtagaaaa
cgatgtgaggcagccttcaaactgaaagaaattgcccgtagggagaaacagcaaaggtgg
actcggcgagaggcatgtgactttttccgtgtgctgtccagctttggtgttgaatatgac
cctgatactcaactttatgactggcaacggttccgtggtctggcacgactggacaagaag
acagacgagtcactgctcaagtacttccatggatttgtagcaatgtgccgccaggtttgc
cgcctaccccctgctgctggggatgagccaccagatccatctctcttcattgagccaatt
tcagaagagcgagcatctcgtgccctgtttcgcttggatcttcttcgtagggtgcgtgag
caagtactttgtcatcctttgcttattcctcgtctgtcactgtgtcgaccagacacagaa
ctaccagagtggtgggagagtggacgtcatgaccatgagcttcttcagggagcagcacga
tatggtctgagtcgtacagacctcactatattgcaggatcacacattttcttttctgcgg
tgtcagatcagttatttccagtcaaggggaatatctggccattctcgaccttctactcca
actactgcccccccagtgcctactgaacgtcagccctctcatctagcttccctttcctcg
tctgtcagctgttctcctgctccacgcagatcctcatcctgctcatcatcatcttcctca
tcaaactcagaggattcttcagatgaaagcaatggtgtaaaagtaaaacctaatgcaggt
cttccacacgctcgcctgtatgatgaagagagtcggctttctctcgctgcttcccctgcg
gatctcgctacagaggacagtactcagacagctctggagaccccaagcagtgcagactgg
ccaaaggaccgtgtccttctctgcagaattgagcaggtgtgtagtgcagttctaactgga
aaatggtcctcaccacgacgactctcagatccactgagtgacagccccgatagcttgtct
ccaaccccagagcagcagagtcctgtccacttcacacagattagatctgcgcctgacccc
aaagagtttactattcaaataaaaagtgaagaaggccttaagatcaaatttcagaagcac
aaatttacgagtaatggagctcttgattctgcacctcatactcagaagaaaaagagcaag
aaaaagatggatcttgacatggacatgcgaattcctgttgtgaatcagaaggatgggacc
ttgttgttgggggaagaagcccctttacgctgccaactgcctgagtggttacacagaaat
cctgacttcatggttgacccgcgttttattgcgttcatggaagaccgaaggaaaagaaag
aaacatagaagcaaaaagtccaaatcctcctcacagattggaaatgtacagaatccccac
ccccacaatggaaagaagtcttcccacacagaaaactcttttgagacgcaacaccttcct
actgcagccaaaaaaaggaagaaacgtcccccatcaaaaatagtcatgccgtctgcacta
catggagctggtgatgttacacattccttctcagaccttcaacctgaccattctggtcac
tccatgcggtcagtgtacggaccatcagatggagggctgtcccatcaagcaggactgagc
gggctgggatttacccgctttcattcatcgcagacctctttagtgggcagaatccacggc
actacctttgatgagttacaaagctttgaacccccacaacgacatttttctctgcttgat
gatccgatgatgccagcaaattcctcctccagcggtgatgaactggacagaccctga
DBGET
integrated database retrieval system
