Xenopus laevis (African clawed frog): 108714961
Help
Entry
108714961 CDS
T01010
Symbol
rpgrip1.L
Name
(RefSeq) protein fantom
KO
K16550
protein fantom
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xla01009
]
108714961 (rpgrip1.L)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xla03037
]
108714961 (rpgrip1.L)
Protein phosphatases and associated proteins [BR:
xla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108714961 (rpgrip1.L)
Cilium and associated proteins [BR:
xla03037
]
Primary cilia and associated proteins
MKS complex
108714961 (rpgrip1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-C2_1
RPGR1_C
C2
DUF5522
Fuz_longin_1
Motif
Other DBs
NCBI-GeneID:
108714961
NCBI-ProteinID:
XP_018115321
Xenbase:
XB-GENE-17342895
UniProt:
A0A8J0V4Z0
LinkDB
All DBs
Position
1L:complement(154085816..154106147)
Genome browser
AA seq
1284 aa
AA seq
DB search
MSVLLLDETCSDLPVRDTGCKPAVFKAIQEVVAAPYSRKQQGQRIMKIKDKDLKMRRRVS
LIGRDELEDNFLRIHEENLLLKDHARKMEDKIKRMGTRMLWVTSDLVQTGKSAGMKRDGR
DLDAEETIEDLQDRVRDLEHKNETLRHKLVTYKQRLQVQSGCRHCPYSTVPARTDSGVRR
NVALPDHIKRGLRVQSLEVRPPQVFQVQACGETLSDEARAEIERLFNLIESQNNRADDKS
AVLLNNMESVRSVDAVAEVMLSLQRTQQAEKQRTAIQENVMVIRLQKELREKNTTLCALR
EQFHQLKESYETELQQNQKSLTLSHEAVLTQLEDLTSQLKAERTKVVAMEIEQQSVLNLQ
RSLQEFQERVTDVEKENGLLKENYENLLKSSLNEEVGLRQATENELRQKISLLEEQIHCH
VTDNTLNNEQLQHEREQNEHLKKEVSQLHIQLLEKIQEVKSYQEKVSAILSSSVNGPVQE
QPAVTLQRTSTPGLEGYHQMREFNAVMDRWFDGRERRRMEEMKHQMRCEDEQRQRGDSER
QREEEEQKKAEEAERQKWISKMDADHAETILELEKTREMLFLQHKINNDYQEELTAVRLK
AESESRDKEEKKCHYEASILKYRARIHTLEAQLKDIAYGTIPSRHESQSPDVDMSPVPSL
RRGETLFEVHIGAVCFTPRGLREVSDLHPNTFCVYSLCDYETHATPVVTGTSPRYNFTSH
YAVTPDAEFLRYLRVGILTVELYQALGGEHRMLARGHIKLEATLQSTEKIHGAVALTDAT
GEDIGELDYWICLHGSISQVQRVQKQSKKARSYLSAGGHYHSEKSLASPFSTGTQNKLGI
RIWGCRRLKVGYLGYQPSPYAMYRFYHHPDHSTAIIPCSNNPQFGDEFVYPLQITNDLER
YLQKECLYVYVFDDEDMQPGVYLGRAEVPLVSLARGDNIQGDFALLDPCGKCSGSIQLSM
EWKYPIKATSYQSTQEVPLSQHCTHMKLLPSVIPKVNLTQSKQSKTRKAEEDQQDDLTSS
KRGRKDFPSTSSQNTKQTFQNSDLLPAGYNSNDLGTQQEEAVQVQEGEKMEDIKDEDEIN
GDHTADANDPQSTDDEDLILVVKPHVAEKTPSSMIRVEIMSLTLYPYSEVMGDSAVQRLF
VEFRFAGVPPEETETPVSLRKPNQGEELYYHFSKVIHLDGSEHAERRDFLYMLLEGSDSN
GDSVRLRFTVVSDPINEDEECRDVGYAYMDLRFLLRRAEDKAEETLQVLDVANQEQVIGA
LRVAIEAKEAARAVHRTRRAMETE
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtactcctgttggatgagacttgctcagatcttcccgtcagggatacaggttgt
aagccagcggtgtttaaagcaatacaagaggttgtagccgctccctactctcggaaacaa
cagggccagagaataatgaaaataaaagataaggatctgaagatgcgccgaagggtctcc
cttattggtcgagatgaactagaggacaacttcctccgtattcacgaggaaaatctactc
ctcaaggaccatgcaaggaaaatggaagacaagataaaaagaatgggcaccagaatgctc
tgggtaacttcagatcttgtgcagacaggaaaatcagctggaatgaagcgtgacgggcga
gatttagacgctgaggagactatagaagacttacaggacagagtccgagacctggaacat
aaaaatgaaacccttaggcacaagctggttacatacaagcagcgattacaggtgcaaagc
gggtgcagacattgcccctacagcacagtgccagcacgaacagactctggagtcagaaga
aacgttgctctgccagatcacattaaaagaggtctgcgggtacaaagtctggaagtgagg
ccgccccaagttttccaagttcaggcatgtggagagaccctcagtgatgaagccagagca
gagattgagaggctattcaatttaattgaaagtcagaataacagagctgatgacaagtct
gccgttttgctaaataatatggagtccgtgaggtcagtggatgcggtggcagaagtgatg
ctctctctgcaaagaactcagcaggctgagaagcaacggaccgctattcaggagaatgta
atggtgatacgacttcagaaagagctgagagagaagaacacaactctatgtgctctaagg
gaacagttccatcagctaaaggagtcttatgaaacagaactacagcagaatcagaagtcc
ctgacactgagccatgaggctgttttgacccagctggaggacctcacatcccaactgaaa
gcagaaaggacaaaggtggtggcaatggaaattgaacaacaaagtgtccttaacttgcag
agatcattacaagagttccaggagcgtgtaactgacgtagaaaaggaaaatgggctcctc
aaagaaaattatgagaacctacttaaaagttctctaaatgaagaagttggtttaagacaa
gcaacagagaatgaattgcggcaaaagatctctctgttggaggagcaaatccactgccat
gtgactgacaatacactaaataatgaacagcttcagcatgaaagagaacaaaatgagcat
ttaaagaaggaagtctcacaactgcatattcagctcctggaaaagattcaagaagtcaaa
agttatcaggaaaaagtgtcagccatactgtcatcatcagtcaatggccctgtccaggag
caaccagctgtcaccttgcaaagaacctctactcccggactagaaggttaccaccagatg
agggaattcaatgcagttatggatagatggtttgatggcagagaaagacgaagaatggaa
gagatgaaacatcagatgagatgtgaagatgaacaaaggcaaagaggagacagtgaaagg
caaagagaggaagaggagcagaaaaaggcagaggaagcagagaggcagaaatggataagc
aagatggatgcagaccatgcagagacaatcctggagctggaaaagacaagggaaatgttg
ttcctgcaacataaaattaacaatgactatcaggaggaactgacggcagtgaggcttaaa
gccgagagtgaaagcagagacaaagaggaaaagaaatgtcattatgaggctagcattttg
aagtacagagccagaatccacactctagaagctcagctcaaagacattgcatatggaaca
attccctcccgacatgagtctcagtctcctgatgtggatatgtcacctgttccatcactg
cgccggggagagactctctttgaagttcatataggtgccgtctgcttcacaccacggggt
ctaagggaagtcagtgaccttcatccaaacaccttttgtgtttattctttgtgtgactat
gaaacacacgccactccagtagtaactggcaccagccctcggtacaacttcacctctcat
tatgcagttactccagatgctgaatttcttcgctatttgagagtcggaattttaaccgtg
gagttatatcaagccttaggaggagagcatagaatgctggcaagggggcacattaaactg
gaagcaacattgcagagcactgaaaagatacatggagccgttgctttgactgatgccact
ggggaagatataggagaactggattactggatttgtctacatggatccatatctcaggtg
cagcgtgtgcagaagcagagtaaaaaagctcgtagctacctttcagctggcggccattac
cattccgagaagtcattggcatcacctttttctactggaactcaaaataaacttggcatc
agaatatggggctgtagaaggctgaaggtgggatatttgggataccaaccaagcccgtat
gctatgtaccgtttctaccatcaccctgatcattctactgctatcataccatgcagcaac
aatcctcagtttggagatgaatttgtctatccgttacaaataactaatgaccttgagaga
tatctccagaaggagtgcttatatgtctatgtgtttgacgatgaagatatgcagcctgga
gtttacctgggaagagcagaagtgcctttagtcagcctagcaaggggagacaacattcaa
ggagattttgcactgctggacccttgcggtaagtgctctggatcaatacaactcagtatg
gaatggaaatatcctatcaaggctacaagctatcaaagtactcaagaggttccactttca
cagcattgcacccatatgaaattactgccgagtgttataccaaaggttaacttaactcaa
tcgaagcagtccaaaacgcgtaaggctgaggaagatcaacaagatgacttaacctccagc
aaaagggggcggaaggacttcccatcaacatccagtcaaaacacaaaacaaacctttcaa
aattctgatcttctgccagctggatacaacagcaatgatctgggcacacaacaggaggaa
gctgtacaagtgcaggaaggtgagaaaatggaagacataaaggatgaggatgaaatcaat
ggtgaccacacagcagatgcaaatgacccacaaagtacagatgatgaggacttaatttta
gtggtaaaaccacatgttgcagaaaaaacaccttcatccatgatccgtgttgaaatcatg
tctctgaccttatatccatattcagaggtgatgggcgacagcgcagtacaaaggttgttt
gtggaattccgctttgctggcgtccctccagaggaaaccgagacccctgtgtcacttcgc
aaacccaaccaaggcgaggagctatactatcactttagcaaagtgatacatctggatggg
tcagaacatgctgagcgcagagactttctctacatgctattagagggatcagactcaaat
ggagatagtgtcaggctcaggttcactgtggtgagtgacccaattaacgaggatgaagaa
tgtcgtgatgtgggctatgcctatatggacctccgctttctactaagaagagcggaagac
aaagctgaggaaactttacaagttttagatgtagccaatcaagaacaagtcattggagca
ctgagagtagcaatagaagcaaaagaagcggcacgggccgttcacagaacaaggagagca
atggaaacagagtga
DBGET
integrated database retrieval system
