Xenopus laevis (African clawed frog): 108715019
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Entry
108715019 CDS
T01010
Symbol
cacna1i.S
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I isoform X1
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04010
MAPK signaling pathway
xla04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108715019 (cacna1i.S)
04020 Calcium signaling pathway
108715019 (cacna1i.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108715019 (cacna1i.S)
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108715019 (cacna1i.S)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
ECSCR
Motif
Other DBs
NCBI-GeneID:
108715019
NCBI-ProteinID:
XP_018115362
Xenbase:
XB-GENE-17346474
UniProt:
A0A1L8GGZ1
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All DBs
Position
4S:complement(99392471..99751799)
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AA seq
2168 aa
AA seq
DB search
MEESASDPPSPAVVWQPEAKSPGSRIQQMDAADLGVTDQHSPFSQDATAAEEGGSQVDLD
VPYPDLAPVVFFCLKQTTTLRYWCIKVVCNPWFECLSMMVILLNCVTLGMFQPCQDVDCS
SERCQILQVFDDFIFIFFAMEMVVKMLALGIFGKKCYLGDTWNRLDFFIVMAGMVEYSLD
LQNINLSAIRTVRVLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGV
QLWAGLLRNRCFLEENFTIQGDITLPPYYQPEEDDEMPFICSLSGDNGIMGCHEIPPLRD
RGHECCLDKEDYYYYNAIRHEFNVSGMCVNWNQYYNVCRTSNTNPHKGAINFDNIGYAWI
VIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRE
HQLMQEQRALYLSSSTVASYAEPGDCYEEIFQYVCHILRKAKRRTIGLYTSLQNRRQSRH
ELTNNKLGINGKEQHHMWICQKHGQLDYAPHAIVQPIAMTLTSDLSNCPQCTKTKWEDGR
KLSAPNSTRSSRDGAHRQTSESENESRSDGSTSDLDKEEEEDSDEGFCKGLFGEVRVKLR
GIVDSKYFNRGIMIAILVNTISMGIEHHEQPEELTNILEISNIVFTSMFALEMMLKLSAF
GLFDYLRNPYNIFDGIIVIISVWEIIGQNDGGLSVLRTFRLLRVLKLVRFMPALRRQLVV
LMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLKTDSGDTVPDRKNFDSLLWAIVTV
FQILTQEDWNVVLYNGMASTSPWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRS
YSDEERSSSNMEECDKYREVESPSDPKLCSVPMTPNGHLENSPVPTQQIPATIMNTSRNS
LQRDQVLVTVGCRKSSVMSLGRTSYDQRPQMGPRPSHWGRSGAWGSRRSSWNSLGRRHSI
KPRTFTTEHESLLSHGEEQRERSHSRRSSSLKHSRAMSLDNKGSSDNPGDTATHPNHRGS
CKGTSMSEEHRDSTGKTPPIMTEVFPKMNNRKDKEEEEEEIDYSLCFRIRKMIEVYRPDW
CALREDWSIFLFSPQNRFRIMCQTIIAHKLFDYVVLAFIFLNCITIALERPQIEHKSTER
IFLSISNYIFTAIFVAEMTLKVVSLGLYFGDQAYLKSSWNILDGFLVFVSLVDIVVSVAS
AGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLKPIGNIVLICCAFFIIFG
ILGVQLFKGKFFYCLGVDVRNVTNKSDCEAANYKWVHHKYNFDNLGQALMSLFVLASKDG
WVNIMYNGLDAVAVDQQPVTNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQNQ
EAEEARRREEKRLRRLEKKRRKAQRLPYYATYCPARLLIHSMCTSHYLDIFITIIICLNV
ITMSLEHYSQPRSLEIALKYCNYMFTTVFVLEAVLKLVAFGFRRFFKDRWNQLDLAIVLL
SVMGIILEEIEINAALPINPTIIRIMRVLRITRVLKLLKMATGMRALLDTVVQALPQVGN
LGLLFMLLFFIYAALGVELFGKLVCNADHPCEGMSRHATFENFGMAFLTLFQVSTGDNWN
GIMKDTLRECTNDDRSCLSSLQFISPLYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQ
EDAELDAEIEMELAHGLCSQTSPVSGLDNGGRGGRPATESHRSLRCFSPAQENLWLDSVS
LIIKDSFEGELTIIDNLSGSVFHHYSSPAICEKCNHDKQEVQLAEMEAFSLTSDKSSSVL
TDELSSEDQGVTSQLKEMKDGQDSPDSLGMFGENIFPLASIPGSPTAERFICEFEKVSLT
PAESWDSWLKEESDPVSPSPLCTDTMSPLLPVPSEFFHPGISAPETDREIPNTIDNDPKR
PSQESWATLRSPGINCSLLRQAAESNSSMESGSATSEDSLQTTLEDSLNLSDSPQCTLDL
PDLRATPASHHTPLPITSLSMIQRRGNRPSFALQNVRRHQRSHSSGGSTSPGCTLHDSMD
PSDEEGAGGSLRGANEPSETFSSLSLTSLFSPTPSLAPPGGTIKKCSSVNSLSVAPSRVR
GAKQFYTVDQQGFLSMPSWVMDFYQTSSPSENQENSSSTEKLPTMEKGLPPSSVSGNADF
GNNSRRNR
NT seq
6507 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtcagcgtcagaccctccctcgcctgctgttgtttggcaaccagaagccaaa
tccccgggctccaggatacaacaaatggatgctgctgatcttggagttacagaccaacat
tctccattttcccaggatgctactgctgctgaagaggggggctctcaagtggatttggat
gtgccgtaccctgacttggcccctgtggttttcttctgcctcaaacagaccaccacccta
cgatactggtgcatcaaagtggtttgtaacccttggttcgagtgtcttagcatgatggta
attctcctgaactgtgtaaccctcggaatgttccagccttgtcaagatgtcgactgctca
tcagagcgatgccaaattcttcaagtcttcgatgactttatattcatcttctttgcaatg
gagatggtggtgaaaatgttggccttggggatctttgggaagaagtgttaccttggagat
acgtggaatagactggacttctttatagtcatggctgggatggtggaatattctcttgat
cttcagaacattaacctatcagccattcgcactgtgcgtgttctaagacccctaaaagcc
atcaaccgagttcccagtatgcggatcctggtgaatttgctgctggacacattgcctatg
ctggggaatgtacttctgctttgtttttttgtcttctttattttcgggatcattggggtg
cagctttgggctggattgctgcgaaaccgctgctttttggaagaaaacttcactatacaa
ggggacataaccttaccaccttattaccagccggaagaagatgatgaaatgccatttatt
tgttctttgtctggtgacaatggaatcatggggtgtcatgaaatccccccactaagagac
cgaggtcatgagtgctgcttggacaaagaggactattattattataacgctatccgtcac
gaatttaatgtcagtggcatgtgtgttaattggaaccaatactataacgtctgccgtact
agcaacaccaatcctcacaagggcgccatcaattttgataacattggctatgcctggatt
gtcatattccaggttatcactctggaaggctgggttgagataatgtactatgtcatggat
gcccactccttttacaacttcatctatttcattcttcttattatagtaggatcatttttc
atgatcaatttatgcctggttgttattgctactcaattctcagagaccaaacagagggag
caccaactgatgcaggagcagagggctctctatttatcctctagtactgtagccagttac
gctgagcctggagactgctatgaggagatctttcagtatgtgtgccatatcctgcggaag
gccaagcgccgtacaataggcctctacaccagccttcagaaccgacggcaaagccgccat
gagctcaccaataataaacttgggatcaatggcaaggaacagcatcatatgtggatatgt
cagaaacatggccagctggattatgctcctcatgctattgtgcagcctatcgcaatgacc
ctaacatctgacctctccaattgccctcaatgtaccaaaaccaaatgggaggatggccgt
aagctgtcagcaccaaacagcaccagatcaagccgagatggagctcacagacagacaagt
gagagcgaaaacgagagcaggagtgatggaagtacatcagatctagacaaagaggaggag
gaggacagcgatgaaggcttttgtaaaggactgtttggtgaagtccgtgtgaagctcaga
gggatagttgatagtaaatatttcaatcggggaatcatgattgccattcttgtgaacaca
atcagtatgggaatagaacatcatgagcagccagaagagctaacaaatatcctggaaatt
agtaacattgtcttcactagcatgtttgctctggaaatgatgctgaaactttcagccttt
ggcctgtttgattacctgcggaacccatataatatctttgatggcatcattgtcataatc
agtgtctgggagataattgggcagaatgatggagggctgtctgtactaaggactttccga
cttctacgagtgctgaagctggtacggtttatgcctgcattgaggcgtcagttggtggta
ttgatgaagactatggacaacgtggccacattctgcatgcttctgatgctcttcatcttc
attttcagtatccttgggatgcatatcttcggatgtaaattcagtttaaagactgattcc
ggagatactgttccagacaggaaaaactttgattctctactttgggccattgtcacggtt
ttccagatccttacccaagaggattggaatgtcgtgctgtacaatggaatggccagtaca
tctccatgggctgccctttactttgtagcattaatgacatttggaaattacgttttattc
aacttgcttgttgctatattggttgaagggtttcaagcagagggagatgccaacagatct
tattctgatgaggaaaggagttcctctaatatggaggaatgtgataaatatcgggaagtt
gaatctccatcggatcccaaactttgttcagtacctatgactccaaatggacatttagaa
aacagccctgtcccaacccaacaaatcccagctacaataatgaatacatcaaggaattct
cttcaaagggatcaagttcttgtaactgttggctgcagaaaaagtagtgtgatgtctctg
gggagaacttcctatgaccagaggccacaaatggggcctcgaccctcacattgggggaga
agcggtgcttgggggagccgcagatcaagttggaacagtttagggcgtcgtcacagtata
aaaccaagaacattcacaactgagcatgaatcattgctgtcacatggagaagagcaaaga
gaaagaagtcactccaggagatcatcaagtttaaagcactcaagagcaatgtctctagat
aataaaggctcttcagataatccaggtgatacagcaactcatcccaaccacagagggtct
tgcaaaggcacatctatgtcagaagaacatcgtgactccactgggaaaacacctcctatt
atgacggaagtctttcccaaaatgaataaccgaaaagataaggaggaggaagaagaagaa
atagattacagtctgtgtttccggatccgaaaaatgattgaagtgtacagaccagactgg
tgtgcgttacgtgaggattggtctatatttcttttctccccacagaacaggttccgcatc
atgtgtcaaacaataattgcacacaagctttttgactacgtcgtccttgccttcatattc
ctcaactgcattaccatcgctttagagaggcctcagatagagcacaagagtacggaaagg
attttcctgagtatatcaaactatatcttcacagccatttttgtagctgaaatgacattg
aaggtggtctctctaggactttactttggggatcaagcttacctcaagagcagctggaat
attctggatgggtttcttgtctttgtatccctcgttgatattgtggtgtccgtagcatct
gctggcggagcaaaaattctgggtgtcttaagggttcttcgacttttgaggacattgcga
cctctcagggttatcagcagagcacctggtctgaagctggtggtagagaccctgatttct
tctctaaaacccattggaaacatagttctgatctgctgtgccttctttatcatttttgga
atccttggtgtgcagctttttaagggtaaatttttctactgccttggtgtggatgttcga
aatgtcaccaataagtcagactgtgaggcggccaattacaaatgggtgcatcataaatac
aattttgataacctgggacaggcgttaatgtcactttttgtcttggcatcaaaagatgga
tgggttaacataatgtataatggactagatgctgtagcagtggaccaacagccagtgacc
aatcacaatccatggatgttgctgtactttatctcgttcctgctgattgtcagtttcttt
gtactgaacatgtttgtgggtgtcgtggtagagaactttcacaaatgtcggcagaaccag
gaagcagaggaggctcgaagacgagaagaaaaacgattgcgacgcctggagaaaaaacga
aggaaagcccagcgtttaccgtactatgccacctattgtcctgctcgccttcttattcat
tcaatgtgcaccagccactacttggatattttcattacaatcatcatttgccttaacgtt
atcacaatgtccttggagcactatagtcaaccaaggtctcttgaaattgctctaaagtac
tgtaactacatgtttactacagtctttgtacttgaagccgtgctgaagctggtggccttt
ggatttagacgtttcttcaaggacaggtggaaccaactggacctggccattgtgctcctg
tctgtgatggggatcattttagaagaaatcgaaataaatgctgctttgcccatcaatccc
accattattcgcatcatgagggtgctgcgcatcaccagggtgctgaagctgcttaaaatg
gcaacgggcatgagggcactattggacactgtggtacaagctctgcctcaggtaggaaac
ttgggactgctcttcatgcttctcttcttcatctatgctgctctgggagtggagcttttc
gggaaacttgtttgcaatgctgatcacccatgtgaaggaatgagtcgccatgccacattt
gagaattttggaatggccttcctgactctttttcaggtttctactggggacaactggaat
ggaataatgaaggatactttgcgtgaatgcaccaatgatgatcgcagttgcttgagcagc
ctccagttcatctcgcctttgtactttgtgagctttgtgctcacagctcagtttgtgctc
attaacgtagtagtggctgtgttaatgaaacacctggatgacagcaataaagaagcgcag
gaggacgctgagctggatgcagagatagaaatggagttggctcatggcctttgttctcaa
acatcaccagtttctgggttagataatgggggacgcggaggaagaccggccactgaaagt
catcgcagcttaaggtgtttttctcctgctcaggagaatttgtggttggatagtgtttcc
ttaattattaaggactcctttgaaggcgaattaacgattattgataatttatctggatca
gtcttccaccattactcctcaccagccatctgtgagaagtgcaaccacgacaaacaagag
gtccagctggcagaaatggaggccttttctttaacctctgacaagtcctcgtcagtactg
actgatgaactcagttcagaagatcaaggtgtcacgagtcagttaaaggagatgaaggat
gggcaagatagcccggactccttgggaatgtttggtgaaaacatcttcccgcttgcaagc
attcctggttccccaacagccgagcgctttatatgtgagtttgagaaggtgtctctaacc
ccggcagagtcctgggacagctggctcaaagaagaaagcgaccctgtctctccttccccg
ctatgtaccgatacaatgagccctcttttaccagttccatctgaatttttccatcctggt
atctctgcgcctgaaacagatcgagagattccaaacaccatagataatgatcccaaacgg
ccttctcaagaatcatgggccacactgcgttccccgggtatcaactgctcacttcttcgg
caggccgcagaaagcaattcatctatggaaagtggtagtgcaacatctgaggacagctta
cagaccacattggaagatagcctaaatcttagtgactcgccacagtgcacattggacctc
ccagatctccgtgcaacacctgcatcgcaccatactccattacctataacatctctatcc
atgattcaaaggaggggtaaccgccctagctttgcccttcagaacgttcgacgtcatcaa
cggagccatagcagtggtgggagcactagtcctggatgtactcttcatgattccatggac
ccttctgatgaagaaggggcaggtggaagcctgcgaggtgcaaacgagccctctgagact
tttagcagcttatctctgacctccctcttttcaccgactccttctttagcaccacccggg
ggtacgattaaaaaatgcagcagtgtcaatagtctttctgttgctccttctagggtaaga
ggagcaaagcaattttacactgttgatcaacagggcttcctttcaatgccatcttgggtg
atggatttttaccaaacttctagtccctcagaaaaccaagagaatagtagcagtaccgaa
aagttaccaactatggaaaaggggttaccacccagtagtgtctcaggaaatgcggatttt
ggcaataacagtcgacgaaacagatga
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