Xenopus laevis (African clawed frog): 108715054
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Entry
108715054 CDS
T01010
Name
(RefSeq) LOW QUALITY PROTEIN: filamin-B-like
KO
K27392
filamin-B
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108715054
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
108715054
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108715054
Intermediate filaments
Intermediate filament-binding proteins
108715054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
Y_Y_Y
Invasin_D3
Big_3_5
CFSR
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
108715054
NCBI-ProteinID:
XP_041417771
UniProt:
A0A8J1KKD2
LinkDB
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Position
4S:127640227..127711501
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AA seq
1827 aa
AA seq
DB search
MAGKAADFVVESVGTEAGSLGFAIEGPSQAKIECEDQDDGSCDVRYWPKEPGEYAIHIMC
DDEDIKHSPYMALIQPAAADVYPDKVKAYGPGLEKTGCIVNTPAEFFIDPTDAGKAALKI
YSQDVEGNPVEIKTKEKPDGTYTCSYTPAKPIKHTVAVTWGGVSVPNSPFRINIGQGSHP
HLVKVFGPGVEKTGLKANEPTHFTVDCTEAGEGDVSVGIKCDARVISEEEEDIDFDIIPN
ANDTFTVKYMPPAAGRYTIKVLFAGEEIPESSFRIKVDPSHDASKVRAEGPGLSKSGVEN
GKPSHFTVYTKGAGKAPVDVSFTGAAAGDAVKDFEIIDNYDYSHTVRYTPTQQGKMKVSV
NYGGDPIPKSPFTVGVAAPLDLNKIRINGLESRVEVGKDQLFTVDPNGAGGQGKLEVKIS
SPSRKSVPCLVEPVGGKECSTVKYIPKEEGLYNVDVTYDGNPVPGSPYVVEATLPPDPSK
VKAYGPGLKGGLVGKPAEFTIDTKGAGTGGLGLTVEGPCEAKIECSDNGDGTCSVSYLPT
TPGEYFVNILFEETHIPGSPFQANVEMPFDPSKVIATGPGLEHGKVGETGLIHVDCSQAG
PGDLAVEAVSDSGSQAEVNVQDNKDGTYTVTYVPLFAGMYTLALKYGGEQVPKFPARVKV
DPAVDTSNIKVFGPGIEEKGVFREATTDFTVDAKSLAKTGGDHVKTKITNPSGASTDYVL
RDNGDGTYFVEYTPFEKGVHTIKVTYDDEAVPNSPFKVGVTEGCYPDRVKAQGAGLTEAV
TSKPNLFSVITRGAGIGGLGITVEGPSESKMSCKDNKDGSCSVEYTPYVPGDYDVNITYN
GEHIPGSPFRVPVKDVVDPGKVKTSGPGLGTAVRANIPQQFTVNSSKAGIAPLAVQVTGP
RGTVEPVDIVDNGDGTHTVSYTPTLEGPYTVAVQYADEEIPRSPFKVKVLPTYDASKVTA
SGPGLCAQGVSASLPVNFAVDAKNAGLGPLSVQITDQEGKPKKAHIQDNNDGTYSVSYIP
DRTGRYHVAVKYGGDDIPYSPYRIRAMSIGDASKCTAAGPGIQAAVKTGEEVGFVVDATT
AGKGKVTCSILGPDGLETEADVIENADGTYDIYYTTAKTGPYVIHVRFGGADIPNSPFTV
MATDEVPVQVQQQSLSACPPGYQSLVSEADYAPVGSMNGLGFRPFDLVIPFAVRTGEITG
EVHMPSGKTAPADIVDNKDGTVSIRYVPTETGLHELAIKCNGAHIPESPLQFFVNYPNTG
SVSAYGPGLIYGVAKKPATFTIITEDAGEGGLDLAIEGPSKAEISCIDNKDGTCTVTYLP
TLPGDYNILVKYNDIHIAGSPFVAKITDDSRRRSQVKLGSTADFLLDITETDLSLLSASI
KAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNGRHIPNSPISIMVYQSEIGDA
SKVKAFGPGLIEGRSYEMSDFIVDTREAGYGGLSLAVEGPSKVDIQTEDLEDGTCQVSYC
PTEPGVYIVSIKFADEHVPGSPFTAKVIGEGRMKESITRRRKAPSVASVGGLCELNLKIP
EIDRHELTAKVISPSGRKQEAEIVDLGQNTSCVRFVPQETGIHTVSVKYKGEHVPGXPFQ
FTVGPLGDGGAEKVKAGGPGLERGEAGVPAEFSIWTREAGAGGLSIAVEGPSKAELSFED
RKDGSSGVSYVVQEPGDYEVIIKFNDEHIPQSPFLVPIVATSDDARRLTVTSLQESGLRV
NQPASFAIRLNGARGKIDAKVHSPSGAVETALSLNWNQVNLLPWRPIYQGPNLSQYFLKP
NPHRFFHLIYKYTFPKILLTGKTHKKS
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaaggcagcagattttgtggtggagtctgttggcacagaggctggctcctta
ggttttgccatagaaggtccctctcaagccaaaatcgaatgtgaagaccaagatgatggg
tcatgtgacgtccgatattggccaaaggagcccggggaatacgccattcacataatgtgt
gacgatgaggatattaaacacagtccttacatggctctcatccaaccagcggctgcagac
gtatatccagataaggtgaaagcttatgggccgggactggagaaaaccggctgcattgtt
aatacccctgcggaattcttcatagatccaacagatgcaggaaaagcagcattaaagatc
tattcccaggatgtggaagggaatccggtggagatcaagaccaaagagaaaccagatggg
acttacacctgctcctacactccggccaagccaattaaacacacagtggctgtcacatgg
ggcggggtcagtgtacctaacagtccatttaggatcaatattggacaaggcagtcaccca
catttggtgaaggtttttggccccggtgtggagaaaactggattgaaagcaaatgagcca
actcactttacagtcgactgcaccgaggcaggagaaggtgacgtgagcgtcggaattaaa
tgtgatgcccgtgtgatcagcgaggaggaggaagatatcgactttgatattattcccaac
gctaatgacacattcactgtgaaatatatgccgcccgctgcaggacgttacaccattaaa
gtgctctttgcaggagaagaaattcctgaaagttcttttagaatcaaagtcgatccctca
cacgacgccagcaaagtgagagccgagggcccaggactgagtaaatccggtgttgaaaac
gggaaaccctcgcattttacagtttacaccaagggtgcagggaaggccccggtcgatgtg
tcctttactggagcagccgcaggggatgcagtgaaagacttcgagatcatagacaactac
gattattcacacactgtccgatacactccgacacagcagggcaaaatgaaagtgtctgtg
aattacggcggtgaccctattccgaagagcccctttaccgtaggggtggcagcgccgctg
gacttgaacaagatccgaataaatggcctggaaagtagagtggaggttggcaaagatcag
ctgtttactgtggatcctaatggagctggtgggcaaggaaaactggaggtgaagatctcc
agccctagccgaaaatcagtcccgtgtctggtggaacctgttggtggtaaagagtgcagc
actgtgaaatatattcccaaagaggagggtctgtacaatgttgatgtgacttatgatggg
aatccagttcctggaagtccatatgtagtggaagccactttgcctcctgatccatcaaag
gtgaaggcctatggaccaggtctcaaaggtggtcttgttggaaaacctgccgagtttacc
attgatacaaaaggagctggaactggtggtttgggtctaactgttgaaggaccttgtgaa
gcgaagattgaatgttctgacaatggcgatggcacatgttctgtctcctacctccctact
acaccaggagaatattttgttaacatcctgtttgaggaaacccacattccggggtcacct
tttcaagcaaatgttgaaatgccctttgatccttccaaagtaatcgccacgggtccaggc
ctcgagcatggcaaagtaggagaaactggcttgattcatgtggactgttcccaagcagga
ccaggtgacctggcagttgaggctgtctctgattctgggtcacaagcggaggttaatgta
caggataacaaagacgggacatacacagtcacctacgtgccactttttgctggcatgtat
acactggcattgaaatacggtggagaacaagtgccaaagttccctgcccgagttaaagtt
gatccagctgtggataccagtaatattaaagtgtttggaccaggaattgaagaaaaaggg
gtttttagagaagctacaacagactttaccgtggatgccaaatcactagccaaaactgga
ggcgatcacgtcaaaaccaaaatcactaatccgtccggtgcgtccaccgattatgttcta
agagataatggagatggaacttactttgtggagtacactccctttgaaaaaggtgttcat
acaattaaggtgacctatgatgatgaagccgtccccaacagcccattcaaagtaggagtg
acagaggggtgctaccctgaccgtgtgaaagcccaaggtgctggactcacagaagctgtg
acaagcaagccaaacttgttctcagtcattacaaggggggctgggattggtggtctggga
attacagttgaaggaccctcggaatccaaaatgtcttgtaaagacaacaaagatggcagc
tgcagtgtggaatacactccatatgttccaggggactatgatgtgaatataacatataat
ggagagcatattccaggcagtccattcagagtaccagtgaaagatgttgtggatcccggc
aaggtcaagacatctgggcctgggctgggcacagcagtacgagcaaatatcccccagcag
tttactgtgaatagcagcaaagctggaattgctcccctggcagtgcaggtgacgggacca
agagggacggtggaaccagtagacatagtggataatggagacgggactcacacagtgagt
tatacgcccacgctggagggcccctataccgtagctgtccagtatgctgatgaagagatc
ccacgaagtccctttaaggtgaaggtcttgccaacgtatgatgccagcaaggtgactgcc
agcggtcctggactctgcgctcaaggagtttctgccagcctgccagttaattttgctgta
gatgccaagaatgcaggactaggacctctgtcggtccaaatcacggatcaagaagggaag
ccaaagaaagcacatattcaggacaacaatgatggcacctattctgtatcttacatccca
gacaggactgggcgctaccatgttgctgtgaaatatggaggagatgacatcccttactcc
ccatatagaattcgtgccatgtccataggagatgccagcaagtgcacagcagcaggtccc
ggtatccaggcagcagtaaaaacaggggaggaagttggttttgtggtcgatgccacaacc
gctggtaaagggaaagtcacgtgcagcatcctcggcccagatgggttggagactgaagca
gatgtgatcgagaacgcggacggcacttatgacatttactacactacagctaaaaccgga
ccctacgtcatccacgttcgctttggtggagctgacatccccaatagcccctttactgta
atggctacagatgaagtccccgtacaggtgcagcagcagtcccttagtgcatgtcctcca
ggctaccagtccttggtatcggaggcagattatgctcctgttggctcaatgaatggtctg
ggtttccggccttttgatttggttattccatttgccgtacgaactggagagataacaggg
gaagttcacatgccttctgggaagacagcccccgcagatattgttgacaacaaagatggt
actgtgtctattcgatacgttcccacagaaactggactgcacgagctggccattaaatgt
aatggagctcacatcccagaaagcccactgcagttcttcgtgaattatccaaacacagga
agtgtctctgcatatggaccaggccttatctatggggtcgccaagaagccagccacattc
acaattataacagaagatgctggagaagggggcctggatctggcaatagaagggccctcc
aaggcagagatcagctgcattgataacaaagatggcacttgcactgtgacatatctgccc
acccttccaggagattataacatcctagtgaaatataatgacatacacatcgctggaagc
ccttttgttgcaaaaatcacagatgatagcaggcggcgctcacaagtaaaactcggttcc
acggcagactttttattggatatcacggagactgatctgagccttctgtctgccagtata
aaagccccatctggtcgtgatgagccctgtcttctgaaaaggcttccaaacaaccatatt
ggaatttcattcatcccaagggaagttggggagcacttagtcagcattaagaaaaatggc
cgccacatacccaacagtcctatatccatcatggtttaccagtcagaaataggggacgcc
agcaaggtgaaagcctttgggccaggtctgattgaagggcggtcgtatgagatgtcagat
tttattgtggataccagagaggcaggctacggtgggctctcgctggcagtggaaggaccc
agtaaagtagacatccaaacagaggacctagaggatggcacatgccaggtctcctattgt
ccaacagaaccaggagtttacattgtatccatcaagtttgcagatgagcatgttccagga
agcccattcacagccaaagtgattggggagggaagaatgaaggagagcatcacacgcagg
aggaaagcaccatctgtggcctcagtgggtggcctttgcgagctgaacctgaaaatacca
gaaattgaccgacatgaactgacggcaaaggtcatcagcccatcagggaggaaacaagaa
gcagagattgttgatcttggacagaacacgtcgtgtgtgcgttttgtgccacaagagacc
gggatccacaccgtgagcgtaaaatacaaaggggagcatgtgccaggangcccattccag
ttcaccgtgggacccctgggagacggtggagctgagaaagtgaaggctggaggccctgga
ttagaaagaggagaggctggagttccagctgaattcagtatatggacccgggaagctggt
gccggaggcctctccattgctgtagaaggcccaagtaaagctgaactttcatttgaagac
cggaaagatggctcttctggagtttcctatgttgtacaagagcctggtgactacgaagtg
attatcaagttcaacgatgaacatattccccagagcccattcctagttcccatcgttgcc
acttcggacgatgcccgtcggctcactgtcaccagccttcaggaatctggattgagagtt
aaccaaccagcatcctttgccatacggcttaatggggctagaggcaagattgatgccaag
gttcatagcccgtctggagcggtggagactgctttgtcactgaactggaaccaggtaaat
ctattgccttggaggcccatttatcaaggtccgaatttatctcaatattttctgaaacca
aatccacacaggttttttcaccttatttataaatacacttttccaaaaattttgttaaca
gggaaaacacacaaaaaatcgtga
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