Xenopus laevis (African clawed frog): 108715117
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Entry
108715117 CDS
T01010
Name
(RefSeq) neurexin-2 isoform X5
KO
K07377
neurexin
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108715117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108715117
Membrane trafficking [BR:
xla04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
108715117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
108715117
NCBI-ProteinID:
XP_018115432
UniProt:
A0A8J0V5M5
LinkDB
All DBs
Position
4S:complement(28055..257750)
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AA seq
1688 aa
AA seq
DB search
MWSLLCLSSLLSLPLRSFSLQFQGAPGQWVRYSRPTSASGNGGWGEDLNFRLRTNASRGL
LLYQDDEGDCDFLELVLDGGRPRLRFSISCSEPAVVRLPRVVSDGLWHAIVIGGNDREGW
LSVDGERGVSEVRSKRKEMLLRSDLFVGGLPSDLRLSALTLGGAKYEPPFLGELESLKLG
GRPGQLLAGHGVGGTEEEAERVEERERLHSCRGANPCLNGGRCSDEEEGEVRCDCRDTGY
HGENCSEEDRVIEVPAHLTLSNQGKEEYAATFRGNEFFCYDLSHSPIQSSADEITLSFRT
LQRNGLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNSWHDVRVTR
NLRQVTISVDGILTSTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKDVV
YKNNDFKLELSRLASEGDPKMRLSGDLVFRCENVPSLDPVTFQISESFLHLPRWETKKAG
SISFDFRTTEPSGLLLFSQGRPRSGGSVLGTAPGGVVTGRPERQPKADYFAVELLDGTLY
LLLDLGSGGIKIKGSHKKVNDGEWCHVDIQRDGRKGSISVNSRNTPFQVGGESEILDLDG
DMYLGGLPEPREDLQLPPEVWTASLGLGFVGCIRDLFVDGKSRDIRRLAERSGASGLAPF
CTRETQRQCTSSPCRNGGQCREGWNRFICDCVGTGYLGDSCEREAAVLSYDGTMYLKVLL
PGVSHTEAEDVSLRFMSQRAFGLLLATTSKESADTLRLELDGGKVKLTVNLDCIRIVCGP
SKGPETLFAGQKLNDNEWHTVRVLRRGKYLQLSVDNVTVEGHMAGDHTRLELHHLETGIM
TERRFVSALPSNFLGHLTALRYNGAPYLDMCQDGELGRRCELNTRAGGLRPILADPVVFQ
TGPAYLALPQLQAYASMHLLFIFRGRNPDGLLLYNGGQGPDFIAVELVKGYIHYVFDLGN
GPSLMKGNSERPLNDNQWHSVAISRDPGNVHTLRIDGRTVTQHSTGASNLDLKGELYIGG
LPRNMYVTLPKLVASRDGFQGCLASVDLNGRLPELLNDALHRVGPVERGCDGPSTTCSEE
SCGNLGVCLQQWDGFTCDCTMTSYGGPLCNDPGTTYIFGKGGALITYTWPPNDRPSTRAD
RLAVGFTTQQKDAVLLRVDSASGLGDYLQLHIDQGTVGVIFNVGTDDITIEEPGALVSDG
KYHVVRFTRSGGNATLQVDSWPVNERYPAGNPDSERLALARQRIPYRLGRVVDEWLLDKG
RQLTIFNSQAEIKVGGKDQGRPFQGQISGLYYNGLKVLSLAAENDPNVKTEGNLRLIGEV
PSVMTTETTATTLLADMSTTIMETTTTMATTTTRKGRSPTMRDSITQNSDDLLVASAECP
SDDEDLEECEPSTGGELILPIITEDSLDTPPIATRSPFVPPPPTYRTVLTLVDTTKDSLS
VPSNSRPPCPSEQEDSDCDEAIEVSGDSSGEVSESSFPPTDDEDFESVFPMITERTLLSR
SDGSPRKPPGYRPNVRPGGSTSSPYDLLTSNTSPDVIRNIPAGKMNNREPPKPNLDQYPY
IPTSVDKHKKQRFPPITSSPNFHNFPTANPTGSGEKISPGAVEVIRESSSTTGMVVGIVA
AAALCILILLYAMYKYRNRDEGSYQVDQSRNYISNSAQSNGAVVKEKTTPATKTAGKSKK
NKEKEYYV
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgtggtccctcctctgtctctcttccctcctttccctccccctccgttccttttccctc
cagttccaaggggcccctggccagtgggttcggtattcccggcctacatcagctagtggc
aatggaggctggggggaagaccttaatttccgacttcggacaaacgccagccgtggcctg
cttctttaccaagatgatgaaggggactgtgatttccttgagttagttttagatggagga
cgcccacgcctcaggttttccatctcatgttctgagcctgcagttgtccgcttacctcga
gtagtatcagatggcctttggcatgcaatagtcattggtggaaatgaccgtgaaggatgg
ctgtctgtagatggagagagaggagtatctgaagtacgatctaaacggaaagaaatgcta
ctacgcagtgacctttttgttggaggtctgccctctgaccttcgtttatcagcactgact
cttggaggagccaaatatgagccaccttttcttggtgaacttgaaagtttgaaattgggg
gggaggcctggacagttgttggctggtcatggggtgggaggaacagaagaggaggcagag
agggtggaagaacgggaaaggttacattcgtgccgaggagccaatccttgccttaatgga
ggaagatgcagcgatgaagaggaaggagaagtgagatgtgactgtcgggacactgggtat
catggagagaactgttctgaagaggatcgtgtgattgaagttccagcacatctgacgtta
agcaaccaagggaaggaagaatatgcagccaccttcagagggaatgagttcttctgttat
gacctgtcccacagccccatccagagcagtgcagatgaaatcacactctccttccgaact
ctccaacgaaatgggcttatgcttcatacagggaagtcagcagactatgttaatctttca
ctgaagagtggcgcagtgtggctagtgatcaacctgggatctggggcctttgaggcttta
gtggaacctgtcaatggcaagttcaatgacaacagctggcatgacgtcagagtgaccagg
aacctacgacaggttactatctcagttgatgggattctaacttcaactggatacacacaa
gaagactacacaatgctgggaagtgatgacttcttttatatagggggcagtccgaacact
gctgaccttccaggatcccctgttagtaacaactttatgggctgccttaaggatgtggtc
tacaaaaataatgacttcaaacttgaactttcccgccttgcttcagagggagatccaaaa
atgagactaagtggcgaccttgtatttcgctgtgagaatgttccttctctagatcctgtc
acattccagatttctgaatcttttttacacctgccacgttgggagaccaagaaggctgga
tccatatcctttgacttcaggacaacagagcccagtggtctccttctctttagtcagggg
aggccacgttcaggtggtagtgtattgggaacagctccaggtggagtggtcactggaaga
ccagagagacagccaaaggcagactactttgcagtggagttacttgatggaacattgtat
cttttgcttgatcttggatctggtggcatcaagattaaaggtagccacaagaaggtcaat
gatggagaatggtgtcatgtggacattcagagggatggcagaaaaggttctatctccgtt
aacagtcgaaacaccccattccaggttgggggtgaaagtgaaattcttgaccttgatggg
gacatgtatctggggggactgcctgaaccaagagaagacttacagcttccacctgaggtc
tggacagcatcccttggtctaggatttgttggttgcattcgggacctctttgttgatggc
aaaagcagagatatcagaagactggcagagagatctggggcttctggccttgctcctttc
tgtactcgggaaacacagcgacagtgtacttcatcaccttgcagaaatggcgggcagtgc
cgtgagggttggaaccgctttatctgtgactgcgtggggacaggataccttggggacagc
tgtgagagggaagctgcggtgctaagctatgatggaaccatgtacctcaaggtcctgctc
cctggtgtttcccatacagaagcagaggatgtctcattgcgttttatgtcccagagagca
tttggccttcttctggctactacatccaaggaatctgcagacacccttcgactagagctt
gatggaggcaaagtgaagcttactgtaaacctagactgtatacggatagtatgcgggccc
agtaagggcccagagacactgtttgcaggccaaaaactgaatgacaatgaatggcacaca
gttcgagtcctccgcagagggaaatacctacagctcagcgtggacaacgtcactgtggag
ggacacatggctggtgaccacactcgattagaacttcaccatcttgaaactggtataatg
acagagaggcgctttgtttcagctcttccttccaattttttgggccatctaacagcccta
cgctataatggggctccatacctggacatgtgccaagatggtgaactgggtagacgatgt
gagctcaatacacgtgctggaggtcttcgtccaattcttgccgacccagtggtcttccag
acgggtccagcctaccttgcccttccccaacttcaggcttatgcctctatgcatttattg
ttcatattccgtggacggaatccggatggccttcttctttacaatggggggcaagggccc
gatttcattgctgtggagcttgtgaaaggatacatacattatgtctttgacttgggcaat
ggaccatctctgatgaagggcaactcagaaagaccgttaaatgataaccaatggcacagt
gtggcaatatctcgagatccaggaaatgttcatactttgagaattgatggaaggacagtc
acacagcattcaacaggagccagcaatctagatttaaagggtgaattgtatattggtggg
ctcccaagaaatatgtatgtcactttacctaaacttgtggcatctcgcgatggtttccag
ggttgtcttgcctctgtggacctcaatggtcgtctccctgaactcctgaatgatgcactc
caccgagtaggtcctgtggagaggggctgtgatggccctagtacgacatgctcggaggag
tcttgtggaaatcttggggtgtgtctccagcagtgggacggtttcacgtgtgactgcacc
atgacatcttatgggggtcctctctgcaatgatcctggtaccacctacatttttgggaaa
ggaggagcactcattacctatacctggcccccaaatgatcgaccaagtacaagagctgac
cggcttgcagttggtttcaccacccaacaaaaggatgcagttttactccgagtggatagt
gcctctggtttgggagactacttacagcttcacatagaccagggcacagtgggggtgatt
tttaatgtgggcacagatgatataactatcgaagagccaggggccctggtgagtgatgga
aagtatcatgtagtccgattcacccgtagtggaggcaatgctactttgcaggtggacagc
tggcccgtcaatgaaagatatcctgcagggaacccagatagtgaaagattggcgcttgcc
cgtcagcgcatcccctaccgcctgggtcgtgttgtagacgagtggctgctagacaaaggt
cggcagctcaccattttcaacagccaggcagaaatcaaagttggtgggaaggaccaagga
cgtccatttcagggacaaatttcagggttatactacaatggactgaaggtgctgtccctt
gctgctgagaatgaccccaatgtgaagacagaaggaaacctaaggcttattggagaggtt
ccatctgttatgaccactgagaccacagccaccacacttttggctgacatgtccaccaca
atcatggaaacaacaacaactatggccacaacaactacaagaaaagggaggtccccaact
atgagggatagtataactcagaattctgatgaccttcttgttgcctcagctgaatgtcca
agtgatgatgaagacttggaagaatgtgagccgagcacaggaggggaactaatattgccc
ataatcacagaggattccttagatacccctcccattgccacccgttctccctttgttcct
cccccacctacttatcgaactgtcctcactctggtggacaccaccaaagattccttgagt
gtaccttcaaactcgaggccgccttgcccttcagagcaggaggatagtgattgcgatgag
gcaatagaagtctctggtgattcctcaggggaagtgtctgaatcaagctttccacctacc
gatgatgaggactttgaatccgttttccctatgataacagaaaggaccttattgtccaga
tcagatgggtctcctaggaagcctcctgggtaccggccaaatgttaggccaggaggttca
acctcctctccttatgaccttctcacctccaacacatccccagacgttatacggaacatc
cctgcaggcaaaatgaacaacagggaaccaccaaaacctaatttagaccaatacccctat
atccctacctctgtggacaaacacaaaaagcaaaggtttccacctataacttcttcccca
aattttcacaattttcctacagcaaaccctacaggctcaggggagaaaatatctccaggc
gcagtggaagtgatcagggaatccagcagcacgacagggatggtcgtaggtattgttgca
gcagctgccctctgcatcctcattctcctctacgcaatgtataagtataggaaccgagat
gaaggatcttatcaggtggaccaaagtcggaactacatcagtaactctgctcagagcaat
ggtgcagtggtaaaagaaaagacaacacctgccactaaaacagctggtaagagtaagaaa
aataaggaaaaagagtattatgtgtga
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integrated database retrieval system