Xenopus laevis (African clawed frog): 108715161
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Entry
108715161 CDS
T01010
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03020
RNA polymerase
xla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108715161
09124 Replication and repair
03420 Nucleotide excision repair
108715161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
108715161
03019 Messenger RNA biogenesis [BR:
xla03019
]
108715161
03400 DNA repair and recombination proteins [BR:
xla03400
]
108715161
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
108715161
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108715161
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
108715161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
Motif
Other DBs
NCBI-GeneID:
108715161
NCBI-ProteinID:
XP_018115545
UniProt:
A0A974CZW3
A2BD76
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All DBs
Position
4S:2416722..2423673
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AA seq
172 aa
AA seq
DB search
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ
PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD
PNSNPPCYKTVDEDVVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgttctaccacatctcattggaacatgaaattcttctgcatccaagatattttggccct
aaccttctcaacactgtcaaacagaagctcttcactgaggtcgagggaacatgtactggc
aagtatggctttgtgattgcagtgaccacaatcgataacatcggtgcgggggtgatccag
ccaggcagagggtttgtgctttatccggtcaagtacaaggccattgtcttccgtcctttc
aagggtgaggtggtggatgctgtggtgacccaggttaataaggttggactgttcactgaa
attggtcctatgtcctgcttcatatcgagacattcaatcccctctgaaatggaatttgac
cccaattctaacccaccatgttataagactgtggatgaggatgtcgtcattcaacaggat
gatgagatccggctcaaaattgtcgggacaagagtggataaaaatgatatttttgctatc
ggttctctgatggatgattatcttggtctggtgagctga
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integrated database retrieval system
