Xenopus laevis (African clawed frog): 108715228
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Entry
108715228 CDS
T01010
Symbol
ddb2.S
Name
(RefSeq) LOW QUALITY PROTEIN: DNA damage-binding protein 2
KO
K10140
DNA damage-binding protein 2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03420
Nucleotide excision repair
xla04115
p53 signaling pathway
xla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108715228 (ddb2.S)
09124 Replication and repair
03420 Nucleotide excision repair
108715228 (ddb2.S)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
108715228 (ddb2.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
108715228 (ddb2.S)
03400 DNA repair and recombination proteins [BR:
xla03400
]
108715228 (ddb2.S)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108715228 (ddb2.S)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
108715228 (ddb2.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
EIF3I
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
108715228
NCBI-ProteinID:
XP_041417928
Xenbase:
XB-GENE-6487275
UniProt:
A0A8J1KMH4
LinkDB
All DBs
Position
4S:12221894..12233886
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AA seq
544 aa
AA seq
DB search
MPPKRPTHGKRNLEPPSGEEEEQEEVSPGKRKRETEKNATPCSSKDSNCGTNRGDKQTSI
VHYLYRSTLGGNVRAKYLRTPFLRSLASYILYRTNSPFDRRVTTLEWHPTHPNTVAVGSK
GGDIILWDYEQLNNTLIPGIGAGGCITGMKFDPFNPNQLYTSSVAGSTVLQDFSGRNIQT
FTNTEDWAMWYCSLDVSAGMQCVVTGDNVGNVVLLETCGKEIWKLRLHKKKVTHVEFNPR
CDWLLASASVDQTVKLWDLRNIKDKSSCLYTLPHARGVNSAYFSPWDGAKLLTTDQHSEI
RVYSACDWAKPQHIIPHPHRQFQHLTAIKASWHPRYDLIVVGRYPDPQFPGHTSEELRTV
DVFDGQKGNIVCQLYDPYASGIVSLNKFNPMGDLLASGMGFNILIWSREILLMLKQEELM
KALREKGLSVGRXELENSRLPHSSSPRGKLGNKVSATENNKTWTIKDSTKGGKHKEPGEY
IWASAQNWLTFHTWSMAASKSQTPWDCSVAGTQRHSALLHCFMRLNATRPFVFSALTSTV
QTVN
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgccccccaaaagaccaacacatggaaagaggaatctggagcctccttcaggggaggaa
gaggagcaggaggaagtgtcccctggaaaaaggaaacgggagacagagaagaatgctaca
ccatgcagcagtaaagattccaactgcggaacaaacagaggggacaagcagacaagcata
gtgcactacctgtatcgcagcactctggggggcaatgtccgagcaaagtacctgcgaacc
ccttttctccggtctctggcttcatatatattgtatcggaccaacagtccctttgatcgt
agggttaccactctggagtggcaccctacacacccaaatacagtcgcagtgggatcgaaa
ggaggggacatcatcctgtgggactatgaacaactcaataacacccttattcctgggatt
ggagcaggcggttgcatcaccggaatgaagttcgatccgtttaatcctaatcagctgtac
acctcgtctgtggcgggtagcacggtgctacaggacttctctgggcgcaatatccaaacg
ttcaccaacactgaagactgggcaatgtggtactgcagcctcgacgtctctgctggaatg
cagtgtgtggtcaccggggataacgtaggcaacgtggtgctcctggagacctgtgggaag
gagatctggaagctgaggctgcacaagaagaaagtgacgcacgtagagtttaaccctcgc
tgcgattggctgctggcgtccgcttccgtggatcagaccgtgaagctgtgggacctgaga
aatatcaaggacaagtccagctgtctgtacacattgccgcacgcgcgcggtgtcaactct
gcttattttagcccctgggatggggcaaagcttctcactaccgatcagcacagtgagatc
cgtgtttattctgcatgtgattgggccaaaccacagcacataatacctcatcctcacagg
caattccagcacttgactgcaataaaggcttcttggcatccccgctatgatttgattgtt
gttggccgatacccggacccgcagtttccaggacatacatcagaagagctgcggacggta
gacgtgtttgatggacagaaagggaacattgtgtgccagctgtatgacccttatgcgtct
ggtattgtttcgctcaacaagtttaatccaatgggagatcttctggcttctggcatgggt
tttaacatcttgatctggagccgggagattctgttgatgttgaagcaggaggagctgatg
aaggctttgagagaaaagggactttcagtggggagataggaactggagaattccagattg
ccacattccagcagtcccagggggaagctggggaataaagtcagtgccacagagaacaac
aagacatggactataaaggactctactaagggtgggaagcacaaagagccaggcgaatac
atttgggcttcagcacagaactggttaacatttcacacgtggagtatggcagccagcaag
agtcaaacgccttgggattgttcagttgccggaacccagcgccatagtgccttattgcac
tgctttatgcgtttaaatgcaacgcgtccctttgttttctctgctctgacgagtaccgtc
caaacagtgaattga
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