Xenopus laevis (African clawed frog): 108715246
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Entry
108715246 CDS
T01010
Symbol
atg13.S
Name
(RefSeq) autophagy-related protein 13 isoform X4
KO
K08331
autophagy-related protein 13
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04136
Autophagy - other
xla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108715246 (atg13.S)
04136 Autophagy - other
108715246 (atg13.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108715246 (atg13.S)
03029 Mitochondrial biogenesis [BR:
xla03029
]
108715246 (atg13.S)
Membrane trafficking [BR:
xla04131
]
Autophagy
Autophagosome formation proteins
ULK complex
108715246 (atg13.S)
Atg1 complex
108715246 (atg13.S)
Mitochondrial biogenesis [BR:
xla03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
108715246 (atg13.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
108715246
NCBI-ProteinID:
XP_018115719
Xenbase:
XB-GENE-17330836
UniProt:
A0A8J0V5M6
LinkDB
All DBs
Position
4S:14695052..14735903
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AA seq
508 aa
AA seq
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MDTDLSPQDRKDLDKFVKFFALKSVQVIVQARLGDKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALSGQLPAVGRSMCVEISLKTSEGDSMELEVWCLEMNEKCDQDIKVSYTVYNR
LSLLLKSLLAVTRVTPAYRLSRKQGHEYVILYRIYFGDVQLLGLKEGFQAVRVGTVGTPI
GTLTLTCAYRTNLAFMSTRQYEWTQPIMGIIIDHFVDRPFPSTSHMHPCNYRGAEEQVLT
YPAVEESQEVCTTSFSTSPPSQLCSSRLSYQPAGAGLSELGYPVALATGASAVHPHQMMG
PGKESGLPTVSVQPAHGPQAEHDRNLSVSPANVAGTASSSEEDNSPSGSSATGTKSSPST
TPHILFTRKVGAFVDKPSPQVTYTSTDIPFAVFVPKLADNEDTDPMIVCPETPEEESPEA
RSLHSSCSSSETPQDDFVMIDFRPAFSKDDLPMDVGTFYREFQNPPQLSSLSIDIAVQSM
AEDLDSLPEKLAIHEKNMKEFDAFVDSL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggatactgaccttagtccccaggaccggaaggacttggacaagtttgtcaaattcttt
gcgctaaagagtgtgcaggtgattgtacaagctcgactcggagataagatctgcacccgc
tcctcctcatctcctacgggatcagactggtttaacttggcaatcaaggatatcccagag
gtgacccatgaagcaaagaaagctctgtcagggcagctgcctgctgtgggacgttccatg
tgtgtggagatatcactgaagacatccgagggcgattccatggagctggaagtctggtgt
ctggaaatgaatgaaaagtgtgaccaggacattaaggtctcttatactgtatataacaga
ttgtcgctgctgttaaagtcattacttgctgtcaccagagtgaccccagcttacagactc
tccagaaagcaaggacatgaatatgtcattctgtacaggatttactttggagatgttcaa
ctccttggacttaaagaaggtttccaggctgtacgagttggaactgttggaaccccaatt
ggcacgctcacgcttacttgtgcctacagaaccaacctggctttcatgtcaaccaggcag
tatgagtggacccagcccatcatggggattataattgatcactttgttgaccgtcccttc
cccagcacctcacacatgcatccctgcaactacaggggtgctgaagagcaagtgcttacc
taccctgctgtggaggagtctcaagaagtctgtacaacgtcgttttcgacctcccctcct
tcacagctctgcagctctcgcctctcctatcaaccggcaggagcaggactctcagaactg
ggttacccagtggccttggctactggagcgagtgcagtccacccacaccagatgatggga
ccaggaaaagaaagtggtttgccaactgttagcgttcagcctgcccacggaccccaggct
gagcacgatcgaaacctatcagtgtctcccgccaatgtagcagggacagcatccagcagc
gaggaagacaattccccctcaggtagcagtgccactgggacaaagagctcacccagcaca
accccacatatcctatttacaaggaaggtgggagcttttgttgacaaaccttcgccccag
gtcacctataccagtactgatataccgtttgccgtgtttgtgccaaagcttgcagacaat
gaggacactgaccctatgattgtctgccctgagacccccgaagaggagtcgcctgaagcc
aggagcctgcacagttcctgttctagcagtgagacaccccaagatgattttgtgatgatc
gactttagacctgcattctctaaagatgaccttcccatggatgtggggaccttctaccgg
gagtttcagaaccctccgcagctaagcagcttatccatagatatcgctgtgcaatcgatg
gcggaggacttggactctctgccggagaaactggccatccacgaaaaaaacatgaaagag
tttgatgcatttgttgattctctgtag
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integrated database retrieval system
