Xenopus laevis (African clawed frog): 108715257
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Entry
108715257 CDS
T01010
Name
(RefSeq) rab5 GDP/GTP exchange factor-like isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108715257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108715257
Membrane trafficking [BR:
xla04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
108715257
Protein recycling
Other Rab GTPase associated proteins
108715257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Lebercilin
Motif
Other DBs
NCBI-GeneID:
108715257
NCBI-ProteinID:
XP_018115756
UniProt:
A0A8J0V686
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All DBs
Position
1L:155803175..155815797
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AA seq
471 aa
AA seq
DB search
MNVAPPKQEPHLPHWGKSPTFLHPQEADLYKRGFVYQPEMCRENCGYYGNPAWHGYCSRC
WIKERQKRLTSPLTDGFRHHTGTLFLRSERENTSELRQNANTVRVVAINTDTTYVQHSQS
TYRHFPTTDVTADPRFFIPWSSLESMAKGDFSCFLKALRSQDAQQLNTQCTNLIQRLQDA
ENLKPNKMGEQVQDFYHKIADHFPDHMPEERDHFLDNIEKLVMTRLYRSVFCLDGSPDEQ
KDLSLQRRIKSLNWVTPKMLQVPLDENIIEVKDWILSAVTAMVEMDSKRAPQDKLTCVSR
ASNCLFKSIGASKKDPATTDDFLSCLIYITLRANPPRLVSNLEYITRFCNPVRLTTGEWG
YCFTNLCCAVSFIETLDASSLSLTQEEFDCLMKQHKTELSTPNLAAQQSTLQQMQHNKKL
LAELQCRQDSLIQRAEILEKELRAWPQLIQGEVKAIIHRFPLDPSRTPSQS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtagcacctccaaagcaagagcctcatcttcctcattggggaaagagtcccaca
tttctgcaccctcaggaagcagacttgtacaaaagaggctttgtctatcagccagagatg
tgcagagaaaactgtggatattatgggaacccagcgtggcatgggtactgctcaagatgc
tggataaaggagagacagaagcgtctgacctctccattaacagacggtttcaggcaccat
acagggactcttttcttgagatcagagagggaaaacaccagtgagctaagacaaaatgca
aatacagtcagggtggtggccatcaacacagacaccacgtatgtacaacattcccagtcc
acatacagacactttcctacaacagatgtgacagcagatcctaggttcttcattccttgg
tcctccctggaatccatggctaaaggggatttttcatgttttttgaaagctttgcgcagc
caagatgcacagcaactaaacacacagtgtacaaatttaattcagaggctgcaagatgca
gagaacttaaagccaaacaaaatgggagagcaagtacaagacttctaccacaagattgca
gatcactttcctgatcacatgcccgaggagcgagaccactttctggataacattgaaaag
ctagtaatgacccgactttacagatctgtattctgtctggatgggtcaccagatgaacaa
aaagacctgtcactccagagacgtatcaagtctttgaactgggtgacacctaagatgctt
caggtaccgttagatgagaacattatagaagttaaagactggatcttatctgctgttact
gctatggtggagatggattccaagagagcaccgcaagataagctgacctgtgtttctagg
gcaagcaactgcctcttcaaatctattggagcttccaagaaggatccagcaacaacagat
gacttcttgtcttgcctgatctatatcacactgagggctaacccacccagacttgtctca
aatctggaatatatcaccagattctgcaacccagtgcggctcaccacaggggaatggggt
tattgcttcaccaacctatgctgtgccgtttcattcatcgagacgttagatgcctcatct
ctcagcctcacgcaggaagaatttgattgcttgatgaaacagcacaaaacagagctcagc
actccgaatttggctgctcagcaaagcactctacagcagatgcaacataacaagaagctt
ttggcagagttacagtgtcggcaagacagcctgatccagagagcagagatcttggaaaag
gaactgagagcctggcctcagttaattcaaggtgaagtcaaggcaataatacacaggttc
cctttggacccatcacgtactccaagccaaagttaa
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