Xenopus laevis (African clawed frog): 108715336
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Entry
108715336 CDS
T01010
Symbol
irx3.S
Name
(RefSeq) iroquois-class homeodomain protein irx-3-like isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108715336 (irx3.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
108715336 (irx3.S)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
108715336
NCBI-ProteinID:
XP_018115899
Xenbase:
XB-GENE-17335664
UniProt:
A0A974D0I6
A0A1L8GEK9
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Position
4S:complement(24710466..24714270)
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AA seq
445 aa
AA seq
DB search
MSFPQLGYQYIRPLYPSDRQNVGVTRSGAELSPVGTLSNVLSSVYGAPYAAAAAAQAYGA
FLPYSAELPIFPQLGSQYDMKDSPGVQHAAFSHTHPAFYPYGQYQFGDPSRPKNATREST
STLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRSRT
DEEGNAYGSDHEEDKHEDDEEIDLENIDTEDIESKEDLEDPDADLHSDSKTDARSDSEVS
DGFEDLNVPEDRLLKSVVGPRQVLNEDKCALSSDAKVPQPACEQSKLDRIPPSPPQENNM
PVAHKPKIWSLAETATTPDNPRESPNTGGSVNTQNLIAQHRLIPSPGSRFQGWTGRAFSA
QQLSLLNSAHFLHGLSVSHTAPGSGSATFHKATELKCSADSQTDRLSTVDIEKKIPVLNT
AFQPVQRRSQNQLDAALILSALSSS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccacaactgggttaccagtacatcagacctctgtacccctcggacagacag
aacgtgggggtgaccaggagcggagctgagctgtctccggtcgggactctctctaatgta
ctctcctccgtgtatggagctccctacgctgcggccgccgcagcacaagcctatggagcc
ttcctgccctatagcgcggagctgcctatcttcccccagctggggtcacaatatgacatg
aaagacagtcctggggtccagcacgctgccttctctcacactcacccagctttttatccc
tacggacagtaccagtttggagacccgtcaaggcccaaaaatgctacgagagagagcaca
agtaccctgaaggcctggctcaatgagcacagaaagaacccgtatccgaccaagggagag
aagatcatgcttgctatcatcactaaaatgaccctcacgcaggtgtccacctggtttgct
aacgcgaggaggagacttaaaaaggaaaacaaaatgacttgggcccctcggagccgaaca
gacgaggaaggcaacgcttacggcagcgaccacgaagaagacaagcacgaggacgacgag
gagatagacctggagaacatcgacaccgaggacattgagagtaaagaagatttggaggac
cccgacgctgatttacattcggactctaaaaccgatgccaggagtgactcggaagtctcg
gatgggtttgaggacctgaatgtccccgaggacagactcctcaaatcagtggttggtcca
aggcaggttttaaatgaggacaagtgtgcactttcttctgacgctaaagttccgcagcct
gcttgtgagcagagcaaacttgacagaatccccccaagtcctcctcaagagaacaacatg
cccgtggcccataaacccaaaatctggtcactggcagagactgctacaaccccagataac
ccacgcgagtcacccaacactgggggctcagtgaacactcaaaacctgattgcacaacac
agacttattccctccccagggagcaggttccagggttggactgggagagctttctctgct
cagcagttgtctttgctgaactctgctcattttctgcacggacttagcgtctctcacaca
gccccgggctctggcagtgcaactttccataaggccacggagctcaagtgcagcgcagac
tctcaaacagatcgactgagcacagtggacatagaaaaaaaaatacctgtattaaataca
gcttttcaaccagtgcaacggaggtcacaaaatcaactggacgctgccctgattctttcc
gctttatcctcatcctaa
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