Xenopus laevis (African clawed frog): 108715340
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Entry
108715340 CDS
T01010
Symbol
irx5.S
Name
(RefSeq) iroquois-class homeodomain protein irx-5
KO
K24889
iroquois-class homeodomain protein IRX
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108715340 (irx5.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
108715340 (irx5.S)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
108715340
NCBI-ProteinID:
XP_018115901
Xenbase:
XB-GENE-17336278
UniProt:
A0A974CYJ1
A0A1L8GE64
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Position
4S:25299897..25304127
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AA seq
481 aa
AA seq
DB search
MCLAMSYPQGYLYQPSASLALYSCPAYSTTVISGPRTDELGRSPSGSAFSPYAGSTAFTA
SSAGFNSPLQYSGDPAAAFTSYVGSPYDHSAGMAGSLGYHPYAAPLGTYPYGDPAYRKNA
TRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWT
PRNRSEDEEDDENIDLEKNEDDDPSKLEEKGDQDGDTGDQKRSPCGVNFDRLEGEVYQGK
ELDQTRSDSEPNEAEERNDLLSKSSAPPTPLLCPPDQAPEDQNLHRHTVHNHQSIQQLHH
HSHQPHPLDLVNRNALVQHGPVTNNATSVIHSTPASTSKPKLWSLAEIATSSDKVKESSD
AAAVTGTTTAQSMVVSASSPSRSPSAQCHFPNSTVLSRPLYYSSPFYPGYTNYGTFSHLH
SHHGPSTTNPSVNSSHHFNGINQTVLNRAEALPKECKLRSQSHADLNKDTPYEMKKGMSS
I
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcttgccatgtcctatcctcagggctacttgtaccaaccatctgcttctttggct
ctgtactcctgccctgcttatagcaccactgtcatctctggacccaggactgatgagctg
gggaggtccccttctggctctgccttctcaccttacgctggatctacagcttttactgcc
agctccgctggcttcaactctcccctccagtacagcggggacccagctgctgcctttact
tcttatgtgggttctccatatgatcacagcgctggcatggctgggtcattaggatatcac
ccgtatgctgcacctttgggaacctacccttatggtgacccagcttataggaaaaatgct
accagagatgcaactgccactttgaaggcctggctcaacgaacacaggaagaatccttac
cctacaaagggcgagaagattatgttggctatcattaccaagatgaccctaactcaagtg
tccacctggtttgctaatgcaaggaggagactaaaaaaggaaaataaaatgacatggact
ccaaggaacaggagtgaggatgaggaggatgacgaaaatatagatctggaaaaaaacgaa
gatgatgacccaagtaaacttgaagaaaagggggaccaagatggagatacaggggatcaa
aagaggagcccttgtggggtaaattttgaccgattagaaggtgaggtatatcagggcaaa
gagctggaccagacaaggagcgattctgaaccgaacgaagcagaggaaagaaatgatctt
ctgtccaaaagctctgctccccccactccactcctgtgccctccagatcaggccccagaa
gatcagaatttgcatcgtcacacagttcacaaccaccagtcaattcagcagctacatcac
cacagtcaccagcctcatccattagacctggtgaataggaatgctcttgtccaacatggc
ccagtcaccaataatgccacctcggttatccactcaacaccagcttccacctcaaagcct
aaactctggtccttggcagagatagcaacttcttcggacaaagtcaaagaaagcagcgat
gctgcagcagtaacagggaccactacagcccagtctatggttgttagcgcctcttcccca
tctagatctccttctgcgcagtgtcatttccccaacagcaccgttttgtctcgccccctt
tattacagcagccctttttaccctggctacacgaactatggcactttcagtcaccttcac
agccaccatggacctagcacaactaacccatcggtcaacagcagccatcatttcaatgga
ataaaccagactgtattaaacagagccgaggctttgcccaaagagtgcaaacttagaagc
cagtcacacgctgacctaaataaagacacgccttatgaaatgaagaaaggtatgtctagc
atttaa
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